Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq66 87.8 2e-12 >seq66 Length=13365902 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | ||| |||| |||| ||||||||| || || ||||||||||| | | Sbjct 1687891 CCCCTC--AGACGGAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTATAGTCAGAAA 1687834 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 | || || | || |||||||| |||||||| | || || ||||||||||| ||| | Sbjct 1687833 GAGTGCGGCCATCTTCCAGCTGCTTGCCCGCGAAGATGAGCCTCTGCTGGTCAGGGGGGA 1687774 Query 21070 CGCCTTC 21076 |||||| Sbjct 1687773 TGCCTTC 1687767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422244589699724