Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1 165 7e-36 >seq1 Length=63520090 Score = 165 bits (182), Expect = 7e-36 Identities = 141/174 (81%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 20990 CAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGG 21049 ||||| ||||||||| ||||||| || || || || ||||||||||||||||| || || Sbjct 9298301 CAGGCTCGTGACGTGCGCGATCATGTAGGTGAGCAGTGCGTAGCTGGCGATGTTGAAGGG 9298360 Query 21050 GACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGC 21109 || || ||||||||||| ||||||| ||||||||||||||||||||||||||| | Sbjct 9298361 CACGCCCAGGCCCATGTCCGCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCGTTCAC 9298420 Query 21110 CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTC 21163 |||||||||||| || | |||| || ||||| || |||||| | | ||| || Sbjct 9298421 CACGTAAAACTGGCAGAGGGCGTGGCAGGGAGGCAGCGCCATCAGGGGGAGATC 9298474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427761198816720