Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq86 93.3 3e-14 >seq86 Length=9768497 Score = 93.3 bits (102), Expect = 3e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||||| || || |||||| || | |||||||| || ||||| | || ||||||| Sbjct 5479999 TGGCCTTTGCCGCGGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCAATCTTCTGGC 5480058 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | |||||||| |||||||| || | | ||||||||||| | |||||| | |||| Sbjct 5480059 TCAAGAAACGGGGACTCATGCCTGGCCTCACCTTTTCCAACGAACTCATTAGCAGAGACG 5480118 Query 22868 A 22868 | Sbjct 5480119 A 5480119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356221274206117