Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq16 93.3 4e-14 >seq16 Length=31710007 Score = 93.3 bits (102), Expect = 4e-14 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 12798 AACTTTAAAAATCAATATCTAGAGAAAATACATCATC-GTCCTTATTTGACATAACAGAC 12856 || |||||||||| ||| | || || |||| ||| || || | || |||||| | Sbjct 26953111 AAATTTAAAAATCTGCATCCAAAGTGAAGACATTATCTGTGGTT-TCTGCCATAACTGCA 26953169 Query 12857 ATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATA 12916 | ||||| || ||||| ||| ||||| || |||||||| |||||||| ||||| Sbjct 26953170 AAACGCTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATG 26953229 Query 12917 TTTTCCATAAAATCGAAAGGATTTT 12941 ||||||||||||||||| ||||||| Sbjct 26953230 TTTTCCATAAAATCGAAGGGATTTT 26953254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430967487874278