Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq5 109 5e-19 >seq5 Length=43145420 Score = 109 bits (120), Expect = 5e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||||| | ||||| |||||| |||| Sbjct 42310772 GGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTACCTGGCGGAGGTGATGCCAAAGGCG 42310713 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || |||| || || || || || || || || |||||||| |||||||||||||| Sbjct 42310712 GAGAACCACGACCCAGATATCAAGGAGCATGTGAACTCCCTGGGAGAAAAGCTGAAGACC 42310653 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || | || ||||| ||||| Sbjct 42310652 CTCAGGCAGCGGCTGCGGCGCTG 42310630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430039519983368