Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq16 91.5 2e-13 >seq16 Length=31710007 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 21125 ATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATT 21184 ||||||||||| ||||| || | ||| ||||||||| ||| || ||||| | | | Sbjct 26953113 ATTTAAAAATCTGCATCCAAAGTGAAGACATTATCTGTGGTTTCTGCCATAACTGCAAAA 26953172 Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 ||||| || ||||| ||| || || |||||||| || ||||| || || || | Sbjct 26953173 CGCTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTT 26953232 Query 21245 TCCATAAAATCAAATGGATTTTC 21267 ||||||||||| || |||||||| Sbjct 26953233 TCCATAAAATCGAAGGGATTTTC 26953255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531881924170360