Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq15 82.4 6e-11 >seq15 Length=31830809 Score = 82.4 bits (90), Expect = 6e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 115288 GCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGA 115347 ||| |||||||| ||||| ||| |||| || ||||| | |||| || || || Sbjct 647328 GCACATTTTTGTAAAAACCCTCTCGGGGAAGACCATCATGCTCGAGGTTGAACCCTCAGA 647269 Query 115348 CACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCA 115407 |||| | | | ||||| || || ||||| |||||| | || ||||||||| Sbjct 647268 CACTATAAAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAGCA 647209 Query 115408 AAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACAT 115467 ||| || || | || || || ||| | ||| ||| || || | ||||| ||||| Sbjct 647208 AAGGCTGATCTTCGCTGGTAAGCAACTGGAAAATGGATGTACTTTGTCTGATTACAACAT 647149 Query 115468 TCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||| ||| | ||| | |||||||| | || || || Sbjct 647148 TCAAAAGGAGTCCACTCTTCATCTTCTGTTGAGACTCCGTGGTGG 647104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425329282964680