Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq22 210 2e-48 seq1 190 2e-42 seq11 122 7e-22 seq43 89.7 4e-12 seq62 86.0 5e-11 seq50 86.0 5e-11 >seq22 Length=29017954 Score = 210 bits (232), Expect = 2e-48 Identities = 786/1222 (64%), Gaps = 28/1222 (2%) Strand=Plus/Minus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | ||||| || ||||| | ||||||||||||| |||| ||||| | | | Sbjct 15739334 GTCATGACTCCACCAGCAGTTTCAATACCAAGAGAAAGAAGAGTTACATCCAAAGGCAGC 15739275 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || ||| | |||||| | | ||| ||||| ||||| |||| ||| | |||| Sbjct 15739274 AAATCTTGCACATTTTCAGACTTGTCTCCAGATAGAATGGCTGCCTGAACAGCTGTACCA 15739215 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675 || ||||||||||| ||||| || | | | ||||| |||||| ||||| || || | | Sbjct 15739214 TAAGCAACAGCTTCTTCAGGGTTGATGCTCTTATTTAATTTTTTTCCATTAAAGAAGTCT 15739155 Query 517676 GAAAGAAGTTGTCT-TACCTTAGGAATAC-GAGATGATCCTCCAACTAATACAATTTCAT 517733 | ||||| | ||| | ||| || |||| | | | || || || | ||||| |||| Sbjct 15739154 TACAGAAGCT-TCTGGATCTTGGGGATACAGGTAGAAACCACCCACCAGGACAATGTCAT 15739096 Query 517734 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCG 517793 | | |||||| || ||||| || | ||| | | | || || | || || ||| Sbjct 15739095 GGATCTGTGACTTGTCCAGCTTAGCATCTCGAAGAGCCTTCTCTGCAGGGTCCAGAGTGC 15739036 Query 517794 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAAT 517853 | | |||| ||| | | ||||| ||| ||| | ||||| | | || | | Sbjct 15739035 CACAGAACAGGTCAGCGTTCAACTCTTCAAATCGAGCACAAGTAATGGAGGTATAGAATT 15738976 Query 517854 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 517913 | |||||||| | | ||||| | ||||| | | ||| || ||||| || | | Sbjct 15738975 CGATTCCTTCATAAAGGGAATCTATCTCAATGCTGGCTTGGGTGCTGGAAGAGAGGGTTC 15738916 Query 517914 GTTTAGCACGTTCACATGCTGTCCTTAGTC-TTCGTAAG---GCTTTTGCTGATTGATTC 517969 || || ||||||||||| || | || | | | || ||| | || | |||| Sbjct 15738915 TCTTTGCTCGTTCACATGCAGTACAAAGACAGTGGACAGCTCTCTTGTTCTCACTGAT-- 15738858 Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTAT 518027 || | |||| || | |||||| || ||| | | ||| | || | | ||| | Sbjct 15738857 --GTCCTTCTTATGCTTGCACTTGAATTCAACAATAAA--ATGATTGACCATTCTATTGT 15738802 Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 518087 ||||| ||| || || | | || | ||| | ||| | | |||| || | |||| Sbjct 15738801 CAAAACGTTCTCCACCTATGTGGGTGTCTCCAGCTATAGATTTCACTTCAAAGATCCCAT 15738742 Query 518088 CTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147 |||||| || | | | |||||| || ||||| || | || |||||| || |||| Sbjct 15738741 CTTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCTAAATAAAAAATCAGCACAT 15738682 Query 518148 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207 | |||| | ||||| || | ||||| |||| || |||||| ||||| ||| Sbjct 15738681 TTCTTTCAGCTCCAACCTTTTTGTCTAAGCCATAAGCAATAGTAGCAGCTGTTGGCTCAC 15738622 Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267 | |||||||| | |||||||||||| || | |||| ||||||| || || || | Sbjct 15738621 TGATAATTCTAAGTACATTAAGACCATCAGTGGTTCCAGCATCTTAGGTTGCCTGATGCT 15738562 Query 518268 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATAT 518327 | || || ||||| || || || ||||| | || |||| || || || |||| || Sbjct 15738561 GAGAGTCATTAAAGTAAGCTGGCACAGTCACCACAGCATTGGTAACAGTCTTCCCAAGAT 15738502 Query 518328 AAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAAT 518387 |||| || ||| ||||| || | | | ||| || || | |||| | || Sbjct 15738501 AAGCTTCTGAAATTTCCTTCATCTTTGTCAGCAACATAGAAGACACCTGTTTTAGG---- 15738446 Query 518388 ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAA 518447 | || | |||| ||| | ||| || | || | || |||| | | Sbjct 15738445 ------TAGAAGCTGTTTG-TATTCTGCTTGAACCTTGGGCCTGCCTGCATCATTCACCA 15738393 Query 518448 CTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCA 518506 | | || ||||| | ||||||| || || | ||| | |||||| | ||| Sbjct 15738392 CCATGAAGGGCCAATGCCTCATATCAGACTGGATGACAGCATCA-TCAAATCTACATCCA 15738334 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566 || | | || ||||||| || || ||||| || || |||| |||||| || || Sbjct 15738333 ATCAGACACTTGGCATCAACAACTGTGTTGGTGGGGTTCGTTGCCACTTGATTTTCTGCA 15738274 Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626 |||||||| ||||| ||| || || || || | || || |||||| || ||||| Sbjct 15738273 GCATCTCCTATCAGTCGTTAGGTGTCAGTGAAAGCGACTTAACTTGGAGTGGTTCGATTT 15738214 Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 518686 || | |||||| ||||| || || ||||| |||| || | ||||| ||||| | Sbjct 15738213 CCCTTATCATTGGCAATTATCTCCACTTTTCCATGCTGGAAGACACCCACACAGGAGTAG 15738154 Query 518687 GTTGTTCCTAAATCAATACCAA 518708 || || || | |||||| |||| Sbjct 15738153 GTGGTGCCAAGATCAATGCCAA 15738132 >seq1 Length=63520090 Score = 190 bits (210), Expect = 2e-42 Identities = 785/1228 (64%), Gaps = 15/1228 (1%) Strand=Plus/Minus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| || ||||| || ||||| ||||||||||||||||||||||| || | Sbjct 47213143 GTCATGATTCCACCAGCAGTTTCAGTGCCAAGAGAAAGAGGAGTGACATCCGAAAGCAGC 47213084 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || ||||| || || | | ||| ||||| ||||| |||| ||| |||||| Sbjct 47213083 AAATCTTGAACACTTGCAGACTTGTCTCCAGATAGAATGGCTGCCTGAACAGCTGCACCA 47213024 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675 || |||||||| || |||| || | | | | ||| || ||| | ||| ||||| | | Sbjct 47213023 TAAGCAACAGCCACAACAGGGTTGATATTCTTATTCCATTCTTTTCTATTAAAAAAGTCT 47212964 Query 517676 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 ||||| | | ||| || ||| | || | || || | ||||| ||||| Sbjct 47212963 TGTAGAAGCTCCTGGATCTTGGGGGTACAGGTAGAACTACCCACCAGGACAATGTCATGG 47212904 Query 517736 ACCTGTGATTTATCCAGTTTTGAATC-CAATAAAACTTTTTCAACGGGTTCAAGACCCGC 517794 | |||||| || |||||||| | ||| ||| | ||| | || |||| || | | | Sbjct 47212903 ATCTGTGACTTGTCCAGTTTAGTATCTCAAGGAGCCTTCTCCACAGGGTCCAGGGTGC-C 47212845 Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 517854 | | || ||| | | | ||||| ||| ||| ||||| | | || | || Sbjct 47212844 ACAGACCAGGTCAGCATTCAACTCTTCAAATCGAGCATGAGTAATGGAGGTATAGAAGTC 47212785 Query 517855 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 |||| ||| | ||||||| ||||| | | ||| || ||||| || | | Sbjct 47212784 CATTCTTTCATAGCGGGAATCAATCTCAATACTGGCTTGGGTGCTGGAAGAGAGGGGTCT 47212725 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGCTGATTGATTCA 517970 || || ||||||||||| | || | | ||| | | || | |||| Sbjct 47212724 CTTGGCTCGTTCACATGCAATATGAAGATGGCAGATAGCTCTCTTGTTCTCACTGATG-- 47212667 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 518030 || | |||| || | |||||| || ||| | | || | || | | || |||| Sbjct 47212666 --TCCTTCTTATGCTTGCACTTGAATTCAGCAATAAAACAATTGACTATTCAGTTGTCAA 47212609 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 ||||||| || || |||| || | || | ||| | | |||| ||| | |||||||| Sbjct 47212608 AATCTTCTCCACCTAATTGGGTGTCCCCAGCTATAGATTTCACTTTGAAGATTCCATCTT 47212549 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 ||| || | | | ||| || || ||||| || | || |||||| || ||||| Sbjct 47212548 CAATAGGAAGGATTGACACACCAAAAGTGCCACCTCCTAAATAAAAAATCAGCACATTTC 47212489 Query 518151 TTTCTTTGTCTTGG-TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 |||| | ||| ||||| || | ||||| |||| ||||||||| ||||| ||| | Sbjct 47212488 TTTCAGT-TCTGACCTTTTTGTCTAAGCCATAAGCAATAGCAGCAGCCGTTGGCTCACTG 47212430 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 |||| ||| | ||||||||||||||||| |||| ||||| || || || || | || Sbjct 47212429 ATAACTCTAAGTACATTAAGACCAGCAATGGTTCCAGCATCCTTGGTTGCCTGACCCTGA 47212370 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 || || ||||| || | || ||||| | | | | || || || |||| |||| Sbjct 47212369 GAGTCATTAAAGTAAACTGGCACAGTCACCATAGTACTGGTAACGGTCTTCCCAAGATAA 47212310 Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389 || || ||| ||||| || | | | ||| || || | | ||||||| | | Sbjct 47212309 GCTTCAGCAATTTCCTTCATCTTTGTCAGCACCATAGAAGACACCTCTTCTGGGTAGAAG 47212250 Query 518390 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACT 518449 ||| | || | |||| ||||| || | || | || | || || | Sbjct 47212249 CTCTTTGTCTCTCCCTTATATTCTACTTGAACCTTGGGCCTGCCTGCATCGTTCATCCCC 47212190 Query 518450 TTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAAT 518508 | || |||| | |||||||| || || ||| ||| | |||||| | |||| Sbjct 47212189 ATGAAGAGCCAATGCTTCATATCAGACTGGACAACAGCATCACT-AAATCTACATCCAAC 47212131 Query 518509 TAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGC 518568 | | || |||||||||| | ||||| || || ||||| ||| || || || || Sbjct 47212130 CAGATGCTTGGCATCAAAAACTATGTTGGTGGGGTTCATTGCCACTTAATTGTTTGCAGC 47212071 Query 518569 ATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACC 518628 || ||| ||||| ||||| || || || || | | || | |||||| || | || || Sbjct 47212070 ATTTCCGATCAGTTGTTCGGTGTCAGTGAAAGTGATGTAAGCTGGAGTGGTTCAGTTTCC 47212011 Query 518629 TTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGT 518688 |||| | ||||| | || ||||| |||| || | ||||||||||| | || Sbjct 47212010 -CCATCACTGGCAATTCTCTCCACTTTTCCATGCTGGAAGACACCTACACAGGAGTAGGT 47211952 Query 518689 TGTTCCTAAATCAATACCAATAGCAATT 518716 || || | |||||| |||| ||| || Sbjct 47211951 GGTGCCAAGATCAATGCCAACTGCAGTT 47211924 Score = 140 bits (154), Expect = 2e-27 Identities = 399/605 (66%), Gaps = 10/605 (2%) Strand=Plus/Minus Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 || ||||||||||| || || | | |||||| || ||||| || | ||||||||| Sbjct 44402441 AATTCCATCTTCAATAGTGAAGATTGACACATCAAAAGTGCCACCTCCTAAATCAAAAAT 44402382 Query 518140 AAGTACATTCATTTCTTTGTCTTGG---TTTTTATCAAGACCATACGCAAAAGCAGCAGC 518196 || | ||| | ||| | || | ||||| || | ||||| |||| ||||||||| Sbjct 44402381 CAGCAAATT--TCTCTCAG-CTCCGACCTTTTTGTCTAAGCCATAAGCAATAGCAGCAGC 44402325 Query 518197 AGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 518256 ||||| ||||| ||| ||| | |||||||||||||||||| || | ||||| || || Sbjct 44402324 TGTTGGCTCATTGGTAACTCTGAGAACATTAAGACCAGCAATGGTTGCAGCATCCTTGGT 44402265 Query 518257 GGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTAC-TT 518315 || || | || | || ||||| || || || ||||| | || |||| | || | Sbjct 44402264 TGCCTGACGCTGGCAGTCATTAAAGTAAGCTGGCACAGTCACCACAGCATTGCTAACAGT 44402205 Query 518316 CTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375 | || ||| |||||| ||| ||| ||||| || | | | ||| || || | | Sbjct 44402204 CCTT-CCAGGATAAGCTTCTGCAATTTCCTTCATCTTTGTCAGTACCATAGAAGACACCT 44402146 Query 518376 GTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTAC 518435 ||| ||| | | | ||| || || || ||||| || || || || Sbjct 44402145 CTTCCGGGTAGAAGTTCTTTTTCTCTCCTTTGTAGTCTACTTTAACATTGGGCCTACCTG 44402086 Query 518436 CAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAA 518495 || | || | | | || |||| | || ||||| || || ||| ||| | | Sbjct 44402085 CATCGTTCACCCCCATGAAGAGCCAATGCTTTATATCAGACTGGACAACAGCATCA-TCA 44402027 Query 518496 AATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCT 518554 ||||| | ||||| | | || |||||||||| || ||||| || || ||| | ||| Sbjct 44402026 AATCTACATCCAATCAGATGCTTGCCATCAAAAATTGTGTTGGTGGGGTTCATTACCGCT 44401967 Query 518555 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 518614 |||| ||| || ||||||| ||||| ||| || || || || | | || |||| Sbjct 44401966 TGATTTTTTGCAGCATCTCTGATCAGTCCTTCAGTGTCAGTGAAAGTGATGTAAATTGGA 44401907 Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 518674 || || | ||| || |||||||| || || | || ||||| |||| || | | ||| Sbjct 44401906 GTGGTTCAATTTCCCTGATCATTGGCGATTCTCTCCACTTTTCCATGCTGGAAGATACCC 44401847 Query 518675 ACACA 518679 ||||| Sbjct 44401846 ACACA 44401842 Score = 120 bits (132), Expect = 2e-21 Identities = 206/295 (70%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | ||||| || ||||| | |||||||||||||||||||||||| || | Sbjct 44403124 GTCATGACTCCACCAGCAGTTTCAATACCAAGAGAAAGAGGAGTGACATCCGAAAGCAGC 44403065 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || ||||| || || | | ||| ||||| ||||| |||| ||| |||||| Sbjct 44403064 AAATCTTGAACACTTGCAGACTTGTCTCCAGATAGAATGGCTGCCTGAACAGCTGCACCA 44403005 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675 || ||||||||||||||||| | | | | ||||| || ||| |||||||| || | | Sbjct 44403004 TAAGCAACAGCTTCATCAGGGTGGATGCTCTTATTTAATTCTTTCCCATTGAAGAAGTCT 44402945 Query 517676 GAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 517734 ||||| | ||| | ||| || | | | || || || || | ||||| ||||| Sbjct 44402944 TGTAGAAGCT-TCTGGATCTT-GGGGTGCAGGTAGAACCACCCACCAGGACAATGTCATG 44402887 Query 517735 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGA 517789 | |||||| || ||||| || | ||| | | ||| || || || || || ||| Sbjct 44402886 GATCTGTGACTTGTCCAGCTTAGCATCTCAAAGAACCTTCTCCACAGGGTCCAGA 44402832 >seq11 Length=36051385 Score = 122 bits (134), Expect = 7e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || | ||||| |||| ||||||||| ||||| ||||| |||||||| | ||| Sbjct 23866095 TTTTTGTCTAAGCCATAAGCAATAGCAGCAGCTGTTGGCTCATTGATAATTCTGAGTACA 23866154 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 |||||||||||||| |||| |||||||| || || || | ||| || || |||||||| Sbjct 23866155 TTAAGACCAGCAATGGTTCCAGCATCTTTGGTTGCCTGACGTTGAGAGTCATTAAAATAA 23866214 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || ||||| | || |||| Sbjct 23866215 GCTGGCACAGTCACCACAGCAT 23866236 Score = 116 bits (128), Expect = 3e-20 Identities = 361/552 (65%), Gaps = 14/552 (3%) Strand=Plus/Plus Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 |||||||| ||||| ||||||||||| || | | ||| ||||| || || |||||||| Sbjct 23865464 GCACCATAAGCAACTGCTTCATCAGGGTTGATACTTTTATTTAATTCCTTCCCATTGAAG 23865523 Query 517670 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 || | | ||||||| ||| | ||| || ||||| | || || || || | ||||| Sbjct 23865524 AAGTCTTGTAGAAGTT-TCTGGATCTTGGGGATACGGGTAGAACCACCCACCAGGACAAT 23865582 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||||| | |||||| || || || || | ||| | | | || || || || || || Sbjct 23865583 GTCATGGATCTGTGACTTGTCAAGCTTAGCATCTCGAAGAGCCTTCTCCACAGGGTCCAG 23865642 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848 | | | |||| || | | | ||||| ||| ||| | ||||| | | || Sbjct 23865643 AGTGCCACGGAACAGATCAGCATTCAACTCTTCAAATCGAGCACGAGTAATGGAGGTATA 23865702 Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908 | || |||||||| | | ||||||| ||||| | | ||| || ||||| || Sbjct 23865703 GAAGTCGATTCCTTCATAGAGGGAATCAATCTCAATACTGGCTTGGGTGCTGGAAGAGAG 23865762 Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATT 517964 | | || || ||||||||||| || | || | || | || ||| | || | | Sbjct 23865763 GGTTCTCTTGGCTCGTTCACATGCAGTACGAAGGCGGCGGACAGCTCTCTTGTTCTCACT 23865822 Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 518022 ||| || | |||| || | |||||| || ||| | | ||| | || | || Sbjct 23865823 GAT----GTCCTTCTTATGCTTGCGCTTGAATTCAGCAATAAA--ATGATTGACCATTCG 23865876 Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 || ||||||||||| || || || | || | || | |||| | | |||| ||| | Sbjct 23865877 GTTGTCAAAATCTTCTCCACCTAAGTGGGTGTCCCCAGCTGTAGATTTCACTTCGAAGAT 23865936 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 |||||||||| || | | | |||||| || ||||| || | ||||||||| || Sbjct 23865937 GCCATCTTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCTAAATCAAAAATCAG 23865996 Query 518143 TACATTCATTTC 518154 ||||| |||| Sbjct 23865997 CACATTTCTTTC 23866008 >seq43 Length=19904821 Score = 89.7 bits (98), Expect = 4e-12 Identities = 183/267 (69%), Gaps = 9/267 (3%) Strand=Plus/Plus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | ||||| || ||| | |||||||||||||| ||||||| | || | Sbjct 12514105 GTCATGACTCCACCAGCAGTTCTGACTTCAAGAGAAAGAGGAATGACATCCAAGAGCAGC 12514164 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || |||| ||||||| | | ||| ||||| ||||| |||| ||| |||||| Sbjct 12514165 AAATCGTGAACATTTTCATACTTGTCTCCAGAGAGAATGGCTGCCTGAACAGCTGCACCA 12514224 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATT-TAGTTTTTTACCATTGAAAAAATT 517674 || |||||||| ||||| || || | | | ||| ||| |||| ||| |||| |||| Sbjct 12514225 TAAGCAACAGCCTCATCGGGGTTGATGCTCTTATTCCAGTCTTTT-CCACTGAAGAAATC 12514283 Query 517675 TGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAA-----T 517728 | ||||| | ||| | ||| || |||| | || || || || | |||| Sbjct 12514284 TTGTAGAAGCT-TCTGGATCTTGGGCATACTGGTAGAACCACCCACCAGGACAACTCTGG 12514342 Query 517729 TTCATGCACCTGTGATTTATCCAGTTT 517755 | |||| | |||||| || |||||||| Sbjct 12514343 TGCATGGATCTGTGACTTGTCCAGTTT 12514369 >seq62 Length=14661113 Score = 86.0 bits (94), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 366998 TAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATT 367057 |||| || |||| ||||| ||||| ||||||||| | || || | || ||||||| Sbjct 7590106 TAGCTACTGTAGCTTTTGGAATGGGCATTAATAAATCAGACATTCGCAAGGTCATTCATT 7590165 Query 367058 ATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATG 367117 |||| || || || | || ||| ||| || || |||||||||||||| || ||||||| Sbjct 7590166 ATGGTGCACCTAAAGAAATGGAATCTTACTACCAGGAAATTGGTAGAGCTGGCCGTGATG 7590225 Query 367118 GA 367119 || Sbjct 7590226 GA 7590227 >seq50 Length=18100965 Score = 86.0 bits (94), Expect = 5e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 ||||| || ||| |||| ||||| || ||||| ||||| || ||| | || || || | Sbjct 14948167 TGTACACTTATTCTGACTGAGGGGGACTCAGCCAAAACTTTGGCTGTTTCAGGCCTCGGT 14948108 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 || |||||||||| | || || |||||||| |||||||||||| | | ||||| | Sbjct 14948107 GTGGTTGGAAGAGACAAATACGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTCCGA 14948048 Query 635561 GATGCTAGTCCTAAA 635575 || ||| || |||| Sbjct 14948047 GAAGCTTCTCATAAA 14948033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780681519468334