Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 1e-12 >seq13 Length=33879094 Score = 89.7 bits (98), Expect = 1e-12 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || |||||||| || || | | |||| |||| ||| |||||||||||||| | | Sbjct 14752926 ATGTTGTAATCAGACAAAGTACATCCATCTTCCAGTTGCTTACCAGCAAAGATCAGCCAT 14752985 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || |||||||| | |||||||| ||||| || || || |||||||| |||||| Sbjct 14752986 TGCTGATCAGGAGCAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGAG 14753045 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGT-TTTACCAGTTAATG-TTTTAATAAATATCT 192532 || || | ||| | | || | ||||| ||| ||| || | ||||| ||| |||| Sbjct 14753046 TCCGAGGGTTCACCCTTGAGCATGATGGTCTTTCCCA--TAGGGTTTTTACAAAAAATCT 14753103 Query 192533 GCATTTT 192539 |||| || Sbjct 14753104 GCATGTT 14753110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984444189847650