Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq66 86.0 2e-11 >seq66 Length=13365902 Score = 86.0 bits (94), Expect = 2e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || |||||||| ||||| || || ||||||| ||||| ||||| Sbjct 9432436 ACCAGTCTCAGCAGTCTTCACAGCTGTGTCAATGAGCCCCTCACGACCCCCCATGGCATG 9432495 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 |||||| | ||| ||| || || | | | ||| |||| || || || || Sbjct 9432496 GAAGAAGAACTCAGTGGGTGTGAGGCCGGCCAGGTAAGAGTTCTCCACAAAGCCGCGGCT 9432555 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||| ||| || ||| |||| | ||||| ||||| || | || || | | || |||| Sbjct 9432556 CTCAGGCCCATAATCGTCCTTGATGAAGTGAGGCAGAGTGCGGTGCTTAAATCCAAATGG 9432615 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCC 302816 ||| || || || || || |||||||| || Sbjct 9432616 GATCCGTTTGCCCTCCACATTCTGCTGCCC 9432645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471764063094743