Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq22 212 5e-49 seq1 192 4e-43 seq11 122 7e-22 seq43 93.3 3e-13 seq50 91.5 1e-12 >seq22 Length=29017954 Score = 212 bits (234), Expect = 5e-49 Identities = 789/1224 (64%), Gaps = 32/1224 (3%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||||||| ||||| | ||||||||||||| |||| ||||| | | | Sbjct 15739334 GTCATGACTCCACCAGCAGTTTCAATACCAAGAGAAAGAAGAGTTACATCCAAAGGCAGC 15739275 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || ||| | |||||| | | ||| ||||| ||||| |||| ||| | |||| Sbjct 15739274 AAATCTTGCACATTTTCAGACTTGTCTCCAGATAGAATGGCTGCCTGAACAGCTGTACCA 15739215 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || ||||||||||| ||||| || | | | ||||| |||||| ||||| || || | | Sbjct 15739214 TAAGCAACAGCTTCTTCAGGGTTGATGCTCTTATTTAATTTTTTTCCATTAAAGAAGTCT 15739155 Query 281843 GAAAGAAGTTGTCT-TACCTTAGGAATAC-GAGATGATCCTCCAACTAATACAATTTCAT 281900 | ||||| | ||| | ||| || |||| | | | || || || | ||||| |||| Sbjct 15739154 TACAGAAGCT-TCTGGATCTTGGGGATACAGGTAGAAACCACCCACCAGGACAATGTCAT 15739096 Query 281901 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAG 281960 | | |||||| || ||||| || | ||| | | | || || | || || ||| Sbjct 15739095 GGATCTGTGACTTGTCCAGCTTAGCATCTCGAAGAGCCTTCTCTGCAGGGTCCAGAGTGC 15739036 Query 281961 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAAT 282020 | | |||| ||| | | ||||| ||| ||| | ||||| | | || | | Sbjct 15739035 CACAGAACAGGTCAGCGTTCAACTCTTCAAATCGAGCACAAGTAATGGAGGTATAGAATT 15738976 Query 282021 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 282080 | |||||||| | | ||||| | ||||| | | ||| || ||||| || | | Sbjct 15738975 CGATTCCTTCATAAAGGGAATCTATCTCAATGCTGGCTTGGGTGCTGGAAGAGAGGGTTC 15738916 Query 282081 GTTTAGCACGTTCACATGCTGTCCTTAGTC-TTCGTAAG---GCTTTTGCTGATTGATTC 282136 || || ||||||||||| || | || | | | || ||| | || | |||| Sbjct 15738915 TCTTTGCTCGTTCACATGCAGTACAAAGACAGTGGACAGCTCTCTTGTTCTCACTGAT-- 15738858 Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTAT 282194 || | |||| || | |||||| || ||| | | ||| | || | | ||| | Sbjct 15738857 --GTCCTTCTTATGCTTGCACTTGAATTCAACAATAAA--ATGATTGACCATTCTATTGT 15738802 Query 282195 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 282254 ||||| ||| || || | | || | ||| | ||| | | |||| || | |||| Sbjct 15738801 CAAAACGTTCTCCACCTATGTGGGTGTCTCCAGCTATAGATTTCACTTCAAAGATCCCAT 15738742 Query 282255 CTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 282314 |||||| || | | | |||||| || ||||| || | || |||||| || |||| Sbjct 15738741 CTTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCTAAATAAAAAATCAGCACAT 15738682 Query 282315 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374 | |||| | ||||| || | ||||| |||| || |||||| ||||| ||| Sbjct 15738681 TTCTTTCAGCTCCAACCTTTTTGTCTAAGCCATAAGCAATAGTAGCAGCTGTTGGCTCAC 15738622 Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434 | |||||||| | |||||||||||| || | |||| ||||||| || || || | Sbjct 15738621 TGATAATTCTAAGTACATTAAGACCATCAGTGGTTCCAGCATCTTAGGTTGCCTGATGCT 15738562 Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATAT 282494 | || || ||||| || || || ||||| | || |||| || || || |||| || Sbjct 15738561 GAGAGTCATTAAAGTAAGCTGGCACAGTCACCACAGCATTGGTAACAGTCTTCCCAAGAT 15738502 Query 282495 AAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT--GGAGA 282552 |||| || ||| ||||| || | | | ||| || || | |||| | | ||| Sbjct 15738501 AAGCTTCTGAAATTTCCTTCATCTTTGTCAGCAACATAGAAGACACCTGTTTTAGGTAGA 15738442 Query 282553 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 282612 | ||| |||| ||| | ||| || | || | || |||| | Sbjct 15738441 A----GCT--------GTTTG-TATTCTGCTTGAACCTTGGGCCTGCCTGCATCATTCAC 15738395 Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTAC 282671 || | || ||||||| ||||||| || || | ||| | |||||| | | Sbjct 15738394 CACCATGAAGGGCCAATGCCTCATATCAGACTGGATGACAGCATCA-TCAAATCTACATC 15738336 Query 282672 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGG 282731 |||| | | || ||||||| || || ||||| || || ||| |||||| || | Sbjct 15738335 CAATCAGACACTTGGCATCAACAACTGTGTTGGTGGGGTTCGTTGCCACTTGATTTTCTG 15738276 Query 282732 CTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 | |||||||| ||||| ||| || || || || | || || |||||| || |||| Sbjct 15738275 CAGCATCTCCTATCAGTCGTTAGGTGTCAGTGAAAGCGACTTAACTTGGAGTGGTTCGAT 15738216 Query 282792 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 282851 | || | |||||| ||||| || || ||||| |||| || | ||||| ||||| Sbjct 15738215 TTCCCTTATCATTGGCAATTATCTCCACTTTTCCATGCTGGAAGACACCCACACAGGAGT 15738156 Query 282852 AAGTTGTTCCTAAATCAATACCAA 282875 | || || || | |||||| |||| Sbjct 15738155 AGGTGGTGCCAAGATCAATGCCAA 15738132 >seq1 Length=63520090 Score = 192 bits (212), Expect = 4e-43 Identities = 789/1232 (64%), Gaps = 23/1232 (2%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| || |||||||| ||||| ||||||||||||||||||||||| || | Sbjct 47213143 GTCATGATTCCACCAGCAGTTTCAGTGCCAAGAGAAAGAGGAGTGACATCCGAAAGCAGC 47213084 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || ||||| || || | | ||| ||||| ||||| |||| ||| |||||| Sbjct 47213083 AAATCTTGAACACTTGCAGACTTGTCTCCAGATAGAATGGCTGCCTGAACAGCTGCACCA 47213024 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || |||||||| || |||| || | | | | ||| || ||| | ||| ||||| | | Sbjct 47213023 TAAGCAACAGCCACAACAGGGTTGATATTCTTATTCCATTCTTTTCTATTAAAAAAGTCT 47212964 Query 281843 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 ||||| | | ||| || ||| | || | || || | ||||| ||||| Sbjct 47212963 TGTAGAAGCTCCTGGATCTTGGGGGTACAGGTAGAACTACCCACCAGGACAATGTCATGG 47212904 Query 281903 ACCTGTGATTTATCCAGTTTTGAATC-CAATAAAACTTTTTCAACGGGTTCAAGA--CCA 281959 | |||||| || |||||||| | ||| ||| | ||| | || |||| || | ||| Sbjct 47212903 ATCTGTGACTTGTCCAGTTTAGTATCTCAAGGAGCCTTCTCCACAGGGTCCAGGGTGCCA 47212844 Query 281960 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA 282019 | | || ||| | | | ||||| ||| ||| ||||| | | || | Sbjct 47212843 ---CAGACCAGGTCAGCATTCAACTCTTCAAATCGAGCATGAGTAATGGAGGTATAGAAG 47212787 Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079 || |||| ||| | ||||||| ||||| | | ||| || ||||| || | Sbjct 47212786 TCCATTCTTTCATAGCGGGAATCAATCTCAATACTGGCTTGGGTGCTGGAAGAGAGGGGT 47212727 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGCTGATTGATT 282135 | || || ||||||||||| | || | | ||| | | || | |||| Sbjct 47212726 CTCTTGGCTCGTTCACATGCAATATGAAGATGGCAGATAGCTCTCTTGTTCTCACTGATG 47212667 Query 282136 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 282195 || | |||| || | |||||| || ||| | | || | || | | || || Sbjct 47212666 ----TCCTTCTTATGCTTGCACTTGAATTCAGCAATAAAACAATTGACTATTCAGTTGTC 47212611 Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255 ||||||||| || || |||| || | || | ||| | | |||| ||| | |||||| Sbjct 47212610 AAAATCTTCTCCACCTAATTGGGTGTCCCCAGCTATAGATTTCACTTTGAAGATTCCATC 47212551 Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315 ||||| || | | | ||| || || ||||| || | || |||||| || ||||| Sbjct 47212550 TTCAATAGGAAGGATTGACACACCAAAAGTGCCACCTCCTAAATAAAAAATCAGCACATT 47212491 Query 282316 CATTTCTTTGTCTTGG-TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374 |||| | ||| ||||| || | ||||| |||| ||||||||| ||||| ||| Sbjct 47212490 TCTTTCAGT-TCTGACCTTTTTGTCTAAGCCATAAGCAATAGCAGCAGCCGTTGGCTCAC 47212432 Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434 | |||| ||| | ||||||||||||||||| |||| ||||| || || || || | | Sbjct 47212431 TGATAACTCTAAGTACATTAAGACCAGCAATGGTTCCAGCATCCTTGGTTGCCTGACCCT 47212372 Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATAT 282494 | || || ||||| || | || ||||| | | | | || || || |||| || Sbjct 47212371 GAGAGTCATTAAAGTAAACTGGCACAGTCACCATAGTACTGGTAACGGTCTTCCCAAGAT 47212312 Query 282495 AAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGA 282552 |||| || ||| ||||| || | | | ||| || || | | |||||| ||| Sbjct 47212311 AAGCTTCAGCAATTTCCTTCATCTTTGTCAGCACCATAGAAGACACCTCTTCTGGGTAGA 47212252 Query 282553 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 282612 | | ||| | || | |||| ||||| || | || | || | || || Sbjct 47212251 AGCT--CTTTGTCTCTCCCTTATATTCTACTTGAACCTTGGGCCTGCCTGCATCGTTCAT 47212194 Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTAC 282671 | | || |||||| |||||||| || || ||| ||| | |||||| | | Sbjct 47212193 CCCCATGAAGAGCCAATGCTTCATATCAGACTGGACAACAGCATCACT-AAATCTACATC 47212135 Query 282672 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGG 282731 ||| | | || |||||||||| | ||||| || || | ||| ||| || || | Sbjct 47212134 CAACCAGATGCTTGGCATCAAAAACTATGTTGGTGGGGTTCATTGCCACTTAATTGTTTG 47212075 Query 282732 CTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 | |||| ||| ||||| ||||| || || || || | | || | |||||| || | | Sbjct 47212074 CAGCATTTCCGATCAGTTGTTCGGTGTCAGTGAAAGTGATGTAAGCTGGAGTGGTTCAGT 47212015 Query 282792 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 282851 | || |||| | ||||| | || ||||| |||| || | ||||||||||| Sbjct 47212014 TTCC-CCATCACTGGCAATTCTCTCCACTTTTCCATGCTGGAAGACACCTACACAGGAGT 47211956 Query 282852 AAGTTGTTCCTAAATCAATACCAATAGCAATT 282883 | || || || | |||||| |||| ||| || Sbjct 47211955 AGGTGGTGCCAAGATCAATGCCAACTGCAGTT 47211924 Score = 136 bits (150), Expect = 3e-26 Identities = 396/604 (66%), Gaps = 8/604 (1%) Strand=Plus/Minus Query 282247 AAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAAT 282306 || ||||||||||| || || | | |||||| || ||||| || | ||||||||| Sbjct 44402441 AATTCCATCTTCAATAGTGAAGATTGACACATCAAAAGTGCCACCTCCTAAATCAAAAAT 44402382 Query 282307 AAGTACATTCATTTCTTTGTCTTGG---TTTTTATCAAGACCATACGCAAAAGCAGCAGC 282363 || | ||| | ||| | || | ||||| || | ||||| |||| ||||||||| Sbjct 44402381 CAGCAAATT--TCTCTCAG-CTCCGACCTTTTTGTCTAAGCCATAAGCAATAGCAGCAGC 44402325 Query 282364 AGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 282423 ||||| ||||| ||| ||| | |||||||||||||||||| || | ||||| || || Sbjct 44402324 TGTTGGCTCATTGGTAACTCTGAGAACATTAAGACCAGCAATGGTTGCAGCATCCTTGGT 44402265 Query 282424 GGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTC 282483 || || | || | || ||||| || || || ||||| | || |||| | || Sbjct 44402264 TGCCTGACGCTGGCAGTCATTAAAGTAAGCTGGCACAGTCACCACAGCATTGCTAACAGT 44402205 Query 282484 TTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTG 282543 ||||| |||||| ||| ||| ||||| || | | | ||| || || | | Sbjct 44402204 CCTTCCAGGATAAGCTTCTGCAATTTCCTTCATCTTTGTCAGTACCATAGAAGACACCTC 44402145 Query 282544 TTCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACC 282603 ||| || | | | ||| || || || ||||| || || || || | Sbjct 44402144 TTCCGGGTAGAAGTTCTTTTTCTCTCCTTTGTAGTCTACTTTAACATTGGGCCTACCTGC 44402085 Query 282604 AACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAA 282663 | | || | | | || |||||| || ||||| || || ||| ||| | || Sbjct 44402084 ATCGTTCACCCCCATGAAGAGCCAATGCTTTATATCAGACTGGACAACAGCATCA-TCAA 44402026 Query 282664 ATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTT 282722 |||| | ||||| | | || |||||||||| || ||||| || || | | | |||| Sbjct 44402025 ATCTACATCCAATCAGATGCTTGCCATCAAAAATTGTGTTGGTGGGGTTCATTACCGCTT 44401966 Query 282723 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 282782 ||| ||| || ||||||| ||||| ||| || || || || | | || ||||| Sbjct 44401965 GATTTTTTGCAGCATCTCTGATCAGTCCTTCAGTGTCAGTGAAAGTGATGTAAATTGGAG 44401906 Query 282783 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 282842 | || | ||| || |||||||| || || | || ||||| |||| || | | ||| | Sbjct 44401905 TGGTTCAATTTCCCTGATCATTGGCGATTCTCTCCACTTTTCCATGCTGGAAGATACCCA 44401846 Query 282843 CACA 282846 |||| Sbjct 44401845 CACA 44401842 Score = 125 bits (138), Expect = 5e-23 Identities = 207/295 (70%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||||||| ||||| | |||||||||||||||||||||||| || | Sbjct 44403124 GTCATGACTCCACCAGCAGTTTCAATACCAAGAGAAAGAGGAGTGACATCCGAAAGCAGC 44403065 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || ||||| || || | | ||| ||||| ||||| |||| ||| |||||| Sbjct 44403064 AAATCTTGAACACTTGCAGACTTGTCTCCAGATAGAATGGCTGCCTGAACAGCTGCACCA 44403005 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || ||||||||||||||||| | | | | ||||| || ||| |||||||| || | | Sbjct 44403004 TAAGCAACAGCTTCATCAGGGTGGATGCTCTTATTTAATTCTTTCCCATTGAAGAAGTCT 44402945 Query 281843 GAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 281901 ||||| | ||| | ||| || | | | || || || || | ||||| ||||| Sbjct 44402944 TGTAGAAGCT-TCTGGATCTT-GGGGTGCAGGTAGAACCACCCACCAGGACAATGTCATG 44402887 Query 281902 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGA 281956 | |||||| || ||||| || | ||| | | ||| || || || || || ||| Sbjct 44402886 GATCTGTGACTTGTCCAGCTTAGCATCTCAAAGAACCTTCTCCACAGGGTCCAGA 44402832 >seq11 Length=36051385 Score = 122 bits (134), Expect = 7e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||||| |||| ||||||||| ||||| ||||| |||||||| | ||| Sbjct 23866095 TTTTTGTCTAAGCCATAAGCAATAGCAGCAGCTGTTGGCTCATTGATAATTCTGAGTACA 23866154 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 |||||||||||||| |||| |||||||| || || || | ||| || || |||||||| Sbjct 23866155 TTAAGACCAGCAATGGTTCCAGCATCTTTGGTTGCCTGACGTTGAGAGTCATTAAAATAA 23866214 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || ||||| | || |||| Sbjct 23866215 GCTGGCACAGTCACCACAGCAT 23866236 Score = 116 bits (128), Expect = 3e-20 Identities = 361/552 (65%), Gaps = 14/552 (3%) Strand=Plus/Plus Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 |||||||| ||||| ||||||||||| || | | ||| ||||| || || |||||||| Sbjct 23865464 GCACCATAAGCAACTGCTTCATCAGGGTTGATACTTTTATTTAATTCCTTCCCATTGAAG 23865523 Query 281837 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895 || | | ||||||| ||| | ||| || ||||| | || || || || | ||||| Sbjct 23865524 AAGTCTTGTAGAAGTT-TCTGGATCTTGGGGATACGGGTAGAACCACCCACCAGGACAAT 23865582 Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955 ||||| | |||||| || || || || | ||| | | | || || || || || || Sbjct 23865583 GTCATGGATCTGTGACTTGTCAAGCTTAGCATCTCGAAGAGCCTTCTCCACAGGGTCCAG 23865642 Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 282015 | | | |||| || | | | ||||| ||| ||| | ||||| | | || Sbjct 23865643 AGTGCCACGGAACAGATCAGCATTCAACTCTTCAAATCGAGCACGAGTAATGGAGGTATA 23865702 Query 282016 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 | || |||||||| | | ||||||| ||||| | | ||| || ||||| || Sbjct 23865703 GAAGTCGATTCCTTCATAGAGGGAATCAATCTCAATACTGGCTTGGGTGCTGGAAGAGAG 23865762 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATT 282131 | | || || ||||||||||| || | || | || | || ||| | || | | Sbjct 23865763 GGTTCTCTTGGCTCGTTCACATGCAGTACGAAGGCGGCGGACAGCTCTCTTGTTCTCACT 23865822 Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 282189 ||| || | |||| || | |||||| || ||| | | ||| | || | || Sbjct 23865823 GAT----GTCCTTCTTATGCTTGCGCTTGAATTCAGCAATAAA--ATGATTGACCATTCG 23865876 Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 || ||||||||||| || || || | || | || | |||| | | |||| ||| | Sbjct 23865877 GTTGTCAAAATCTTCTCCACCTAAGTGGGTGTCCCCAGCTGTAGATTTCACTTCGAAGAT 23865936 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 |||||||||| || | | | |||||| || ||||| || | ||||||||| || Sbjct 23865937 GCCATCTTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCTAAATCAAAAATCAG 23865996 Query 282310 TACATTCATTTC 282321 ||||| |||| Sbjct 23865997 CACATTTCTTTC 23866008 >seq43 Length=19904821 Score = 93.3 bits (102), Expect = 3e-13 Identities = 184/267 (69%), Gaps = 9/267 (3%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||||||| ||| | |||||||||||||| ||||||| | || | Sbjct 12514105 GTCATGACTCCACCAGCAGTTCTGACTTCAAGAGAAAGAGGAATGACATCCAAGAGCAGC 12514164 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || |||| ||||||| | | ||| ||||| ||||| |||| ||| |||||| Sbjct 12514165 AAATCGTGAACATTTTCATACTTGTCTCCAGAGAGAATGGCTGCCTGAACAGCTGCACCA 12514224 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATT-TAGTTTTTTACCATTGAAAAAATT 281841 || |||||||| ||||| || || | | | ||| ||| |||| ||| |||| |||| Sbjct 12514225 TAAGCAACAGCCTCATCGGGGTTGATGCTCTTATTCCAGTCTTTT-CCACTGAAGAAATC 12514283 Query 281842 TGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAA-----T 281895 | ||||| | ||| | ||| || |||| | || || || || | |||| Sbjct 12514284 TTGTAGAAGCT-TCTGGATCTTGGGCATACTGGTAGAACCACCCACCAGGACAACTCTGG 12514342 Query 281896 TTCATGCACCTGTGATTTATCCAGTTT 281922 | |||| | |||||| || |||||||| Sbjct 12514343 TGCATGGATCTGTGACTTGTCCAGTTT 12514369 >seq50 Length=18100965 Score = 91.5 bits (100), Expect = 1e-12 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| || ||| |||| ||||| || ||||| ||||| || ||| | || ||||| | Sbjct 14948167 TGTACACTTATTCTGACTGAGGGGGACTCAGCCAAAACTTTGGCTGTTTCAGGCCTCGGT 14948108 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||||||||| | || || |||||||| |||||||||||| | | ||||| | Sbjct 14948107 GTGGTTGGAAGAGACAAATACGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTCCGA 14948048 Query 400417 GATGCTAGTCCTAAA 400431 || ||| || |||| Sbjct 14948047 GAAGCTTCTCATAAA 14948033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740491017097614