Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq15 84.2 2e-11 >seq15 Length=31830809 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 137208 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTT 137266 ||||| || || || ||||| ||||||||||| || || | || | | ||| |||| Sbjct 647127 ATGAAGAGTGGACTCCTTTTGAATGTTGTAATCAGACAAAGTACATCCA-TTTTCCAGTT 647185 Query 137267 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTT 137326 | |||||||| ||||||| | ||||||||| ||||| |||||||| || || || | Sbjct 647186 GCTTACCAGCGAAGATCAGCCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGGATCT 647245 Query 137327 TTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGG 137386 | |||| | || | ||||||| |||||| || || | | | ||||| || | Sbjct 647246 TGGCCTTTACATTTTTTATAGTGTCTGAGGGTTCAACCTCGAGCATGATGGTCTTCCCCG 647305 Query 137387 TCAATGTTTTTACGAATATTTGC 137409 | |||||||| || || ||| Sbjct 647306 AGAGGGTTTTTACAAAAATGTGC 647328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488526662794800