Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq86 91.5 1e-13 >seq86 Length=9768497 Score = 91.5 bits (100), Expect = 1e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| ||||| || | ||||| ||| | || ||||||| |||| || || ||| Sbjct 5604834 TCCAGCATCTGGGGCCCCACGTGCGACGGCCTGGACCGCATTGTGGAGCGCTGCGACCTG 5604775 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGC-TTGGT 21240 || ||||| || ||||| |||||| | | || || ||||||||||| |||| | ||| | Sbjct 5604774 CCCGAGCTGCATGTGGGTGACTGGATGCTTTTCGAGAACATGGGCGCCTACACCGTTGCT 5604715 Query 21241 CAGCTCTTCAACCTTTAACGGCTTCCCAAAGCCA 21274 | | || ||||| |||||||||| | |||| Sbjct 5604714 GCG-GCCTCCACCTTCAACGGCTTCCAGAGGCCA 5604682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463529149925520