Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq101 91.5 3e-13 >seq101 Length=7975195 Score = 91.5 bits (100), Expect = 3e-13 Identities = 119/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 || || |||||||||| | |||||||||| | || || || |||||||||||||| || Sbjct 7770190 GCTTTGTGGTGGTACTTTGTATCTAAAGGAGTGGAGTATTTGGATACAGTGTTTTTTATC 7770131 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTC-TACACGTATATCATCATTTTACTATGTT 58497 || ||||| || || || ||| ||||| | || || |||||||| | || ||||| Sbjct 7770130 CTGAGGAAGAAAAACAACCAAGTT-TCTTTCTTGCATGTGTATCATCACTGCACCATGTT 7770072 Query 58498 TACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || | | ||| | || ||||| ||| |||| ||||| || Sbjct 7770071 CACACTGTGGTGGATTGGAATTAAGTGGGTTGCGGGAGGACA 7770030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903379140195040