Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chinchilla_20lanigera_20[refseq_20GCF_5F000276665.1_202012-08-28] 2,839 sequences; 2,390,868,971 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq15 82.4 7e-11 >seq15 Length=31830809 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 26990 GCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGA 27049 ||| || ||||||||||| || | || ||| | || | || || || ||||| || || Sbjct 647328 GCACATTTTTGTAAAAACCCTCTCGGGGAAGACCATCATGCTCGAGGTTGAACCCTCAGA 647269 Query 27050 CTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACA 27109 | | || | | || || || || || || || |||||||| || || ||||| || Sbjct 647268 CACTATAAAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAGCA 647209 Query 27110 GCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACAT 27169 | | || | ||| || || ||| ||||| | | | || | || ||||||||||| Sbjct 647208 AAGGCTGATCTTCGCTGGTAAGCAACTGGAAAATGGATGTACTTTGTCTGATTACAACAT 647149 Query 27170 TCAAAAGGAGTCGAC 27184 |||||||||||| || Sbjct 647148 TCAAAAGGAGTCCAC 647134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434902965833280