Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq40 159 4e-34 seq1045 150 2e-31 seq97588 140 3e-28 seq370 125 7e-24 seq1071 120 3e-22 seq130 105 7e-18 seq1138 102 8e-17 seq59 100 3e-16 seq474 95.1 1e-14 seq263 89.7 5e-13 seq420 87.8 2e-12 seq302 87.8 2e-12 seq9 87.8 2e-12 seq8911 84.2 2e-11 >seq40 Length=4171579 Score = 159 bits (176), Expect = 4e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||| || || || || ||||| ||||||||| | || || || || Sbjct 2179605 AAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAGCCC 2179664 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| |||||| || || | || ||||||||||||||| | ||| Sbjct 2179665 AGTGACACCATCGAAAATGTCAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCCGAC 2179724 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| |||||||||| || ||||| |||||||| || | ||||| || || ||| Sbjct 2179725 CAGCAGCGACTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 2179784 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| ||| |||| ||||| || || | ||| | ||||| ||| Sbjct 2179785 AACATCCAGAAAGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGGGGTGGC 2179835 Score = 145 bits (160), Expect = 8e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || ||| ||| Sbjct 2179836 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAACCCAGT 2179895 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | || || |||||||||||| | |||||| Sbjct 2179896 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAG 2179955 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||||| || ||||| |||||||| || | ||||| || || |||||| Sbjct 2179956 CAGCGACTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 2180015 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| ||| |||| ||||| || || | ||| | ||||| ||| Sbjct 2180016 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGGGGTGGC 2180063 >seq1045 Length=604390 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || || ||||| ||||||||| | || ||||| ||| Sbjct 14797 AATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAG 14738 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| ||| || | ||||| |||||||||||| | ||||| Sbjct 14737 TGACACCATCGAGAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 14678 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 14677 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 14618 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| ||||| || || | ||| | ||||| || Sbjct 14617 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGGGGTGG 14570 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || ||||| ||| Sbjct 14568 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTCGAGCCCAGT 14509 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| |||||||||||| | |||||| Sbjct 14508 GACACCATCGAGAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 14449 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| |||||||| || | ||| |||| |||||||||| Sbjct 14448 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCCCCCTGTCCGACTACAAC 14389 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || ||||| || || | ||| | ||||| || Sbjct 14388 ATCCAGAAGGAGTCTACCCTGCACCTGGTCCTCCGCCTCAGGGGTGG 14342 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||||||||||||| | || ||||| || Sbjct 13884 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACCCTGGAGGTCGAGCCCCGT 13825 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| | || | ||||| |||||||||||| | |||||| Sbjct 13824 GACACCATCGAGAATGTCAAGGCATGGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 13765 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| |||||||| || | ||| |||| |||||||||| Sbjct 13764 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCCCCCTGTCCGACTACAAC 13705 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || ||||| || || | ||| | ||||| || Sbjct 13704 ATCCAGAAGGAGTCTACCCTGCACCTGGTCCTCCGCCTCAGGGGTGG 13658 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||||||||||||| | || ||||| || Sbjct 14112 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACCCTGGAGGTCGAGCCCCGT 14053 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| | || | ||||| |||||||||||| | |||||| Sbjct 14052 GACACCATCGAGAATGTCAAGGCATGGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 13993 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| |||||||| || | ||| |||| |||||||||| Sbjct 13992 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCCCCCTGTCCGACTACAAC 13933 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || ||||| || || | ||| | ||||| || Sbjct 13932 ATCCAGAAGGAGTCTACCCTGCACCTGGTCCTCCGCCTCAGGGGTGG 13886 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||||||||||||| | || ||||| || Sbjct 14340 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACCCTGGAGGTCGAGCCCCGT 14281 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| | || | ||||| |||||||||||| | |||||| Sbjct 14280 GACACCATCGAGAATGTCAAGGCATGGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 14221 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| |||||||| || | ||| |||| |||||||||| Sbjct 14220 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCCCCCTGTCCGACTACAAC 14161 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || ||||| || || | ||| | ||||| || Sbjct 14160 ATCCAGAAGGAGTCTACCCTGCACCTGGTCCTCCGCCTCAGGGGTGG 14114 >seq97588 Length=222 Score = 140 bits (154), Expect = 3e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755 || ||||| || || || || ||||| ||||||||| | || || ||| ||| |||| | Sbjct 222 ATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAACCCAGTGACACC 163 Query 40756 GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGA 40815 | | | |||||| || || | || || |||||||||||| | |||||||| ||| Sbjct 162 ATCGAGAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAGCAGCGA 103 Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875 ||||||| || ||||| |||||||| || | ||||| || || |||||||||||| Sbjct 102 CTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAG 43 Query 40876 AAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || ||| |||| ||||| || || | ||| | ||||| ||| Sbjct 42 AAAGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGGGGTGGC 1 >seq370 Length=1552371 Score = 125 bits (138), Expect = 7e-24 Identities = 166/229 (72%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| ||||| | || || || ||||||||| | || ||||| ||| Sbjct 217892 AATGCAGATCTTCGTGAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAGCCCAG 217951 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATC-CCCGCGGACC 40807 |||| | | | | | |||| ||| || | ||||| ||||||||| ||| | ||| Sbjct 217952 TGACACCATTGAGAATGTAAAGGCAAAGATCCAGGACAAGGAGGGCATCACCCCCTGACA 218011 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | || | || || ||||| |||||||| || | |||||||| ||||||| Sbjct 218012 AGCAGAGGCTGAACTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACA 218071 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||| ||| ||||| || || | ||| | ||||| || Sbjct 218072 ACATCCAGAAGGAGTGCACCCTGCACCTGGTCGTCCGCCTCAGGGGTGG 218120 >seq1071 Length=588399 Score = 120 bits (132), Expect = 3e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||| | ||||| | || || || | ||||| | | || ||||| ||| Sbjct 406121 AATGCAGATCTTCCTGAAAACCTTAACTGGTAAGATCATCAACCTAGAGGTCGAGCCCAG 406062 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| ||| || | ||||| |||||||||||| | ||||| Sbjct 406061 TGACACCATTGAGAGTGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 406002 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || || |||||||| || | |||||| ||||||||| Sbjct 406001 GCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCTGCACCCAGTCCGACTACAA 405942 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGG 40912 |||||||||||| |||| ||||| || || | ||| | |||| Sbjct 405941 TATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGGG 405898 Score = 104 bits (114), Expect = 2e-17 Identities = 150/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || ||||||||| | || ||||| ||| Sbjct 405892 ATGCAGATCTTTGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTCGAGCCCAGG 405833 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCAT-CCCCGCGGACCA 40808 |||| | | | | |||||| ||| || ||||| |||||||| |||| | ||||| Sbjct 405832 GACACCATTGAGAATGTCAAGGCAAAGATCTAGGACAAGGAGGGCATACCCCCCTGACCA 405773 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || | || |||| || || || |||||||| || | |||||||| ||||||||| Sbjct 405772 GCTGAGGCTAATCTTTGCCGGTAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 405713 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| ||||| |||| | ||| || || Sbjct 405712 CATCC---AGGAGTCCACCCGGCACCTGGT 405686 >seq130 Length=2658597 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || || |||||||| |||||||| | || ||||| || Sbjct 942088 AACATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCC 942147 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||||| || || | || || || ||||| || | ||| Sbjct 942148 AGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCATCTGAC 942207 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| |||| || | || ||||| |||||||| || | ||||||| || ||| Sbjct 942208 CAGCAGAGACTGATATTTGCCGGCAAGCAGCTGGAGGATGGCTGCACCCTGTCAGATTAC 942267 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||| ||| |||| |||| || ||| Sbjct 942268 AACATCCAGAAAGAGTCCACCTTGCACCTGGTG 942300 >seq1138 Length=537340 Score = 102 bits (112), Expect = 8e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091 || |||||| | |||||||| || ||||| ||||| ||||||| || || ||| || Sbjct 332878 GGAGAGCGCGTTGTGGCCTTTGCTGCCGTGGAGGGGATCTTCTTCTCTGGTTCTTTTGCA 332819 Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151 | ||||| ||||||||||| || || || ||||||||||| || || ||| |||||| Sbjct 332818 TCAATATTCTGGCTCAAGAAGCGGGGACTGATGCCCGGCCTCACCTTTTCCAATGAGCTC 332759 Query 117152 ATCTCCAGGGACGAGG 117167 || ||| ||||||| Sbjct 332758 ATTAGCAGAGACGAGG 332743 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | || | || || |||||||| ||||| | || ||||| |||||| ||| Sbjct 335544 GAGCCGTTATTGAGAGAAAATCCCCGCCGCTTCGTTGTCTTTCCCATCGAATACCATGAC 335485 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || ||| ||||||||||| || ||||| || |||||||||| |||||||| Sbjct 335484 ATCTGGAAGATGTACAAAAAAGCTGAGGCCTCCTTCTGGACCGCTGAGGAGGT 335432 >seq59 Length=3472997 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || || |||||||| |||||||| | || ||||| || Sbjct 2114220 AACATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCC 2114161 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||| | | | | |||||| || || | || || || ||||| || | ||| Sbjct 2114160 AGTCACACCATCGAGAATGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCTGAC 2114101 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || || |||| || | || ||||| |||||||| || | | |||||| |||||| Sbjct 2114100 CAACAGAGACTGATATTTGCCGGCAAGCAGCTGGAGGATGGCCCCACCCTGTCAGACTAC 2114041 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||| ||| |||| |||| || ||| Sbjct 2114040 AACATCCAGAAAGAGTCCACCTTGCACCTGGTG 2114008 >seq474 Length=1313924 Score = 95.1 bits (104), Expect = 1e-14 Identities = 101/129 (78%), Gaps = 6/129 (5%) Strand=Plus/Minus Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTC-GGGCAGTTTCGCCGCCATATTT 117100 ||||||||||||| |||| || |||| ||||| || ||| |||| || || ||||| Sbjct 1049987 TGGTGGCCTTCGCCGCCGGAGAAGGCGGTTTCTTCTCTGGGTCGTTT-GCTGCTATATTC 1049929 Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCTCCA 117158 ||||| ||||| | ||||||||||| || || || ||||| |||||||| ||| || Sbjct 1049928 TGGCTGAAGAAGAGAGGCCTCATGCCAGGACTCACGTTTTCA--AACGAGCTGATCAGCA 1049871 Query 117159 GGGACGAGG 117167 ||||||||| Sbjct 1049870 GGGACGAGG 1049862 Score = 82.4 bits (90), Expect = 8e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862 ||| |||||||| ||| ||||||||||| | ||||| || || ||||| |||||||| Sbjct 1057252 GGTGGAGCGTTTTAGTCAAGAGGTGCAGGTCCCAGAGGCTCGATGTTTCTATGGCTTTCA 1057193 Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTA 116895 || ||| |||||||| |||||||| ||||| Sbjct 1057192 AATTCTCATCGAGAACGTTCACTCGGAGATGTA 1057160 >seq263 Length=1906157 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || || || ||||| |||| ||| | || ||| | || Sbjct 1272392 AACATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCACCACTCTTGAGGTCAAGCCC 1272451 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | || || ||||| || || | || || || ||||| | | || Sbjct 1272452 AGTGACACCATAGAGAATGC-CAAGGCCAAGATCCAAGATAAGGAAGGCATTCTATCTGA 1272510 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 || ||| |||| || | || ||||| |||||||| |||| |||||||| ||||| Sbjct 1272511 CCGGCAGAGACTGATATTTGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCAGACTA 1272570 Query 40866 CAACATCCAGAAGGAGGCCAC 40886 |||||||||||| ||| |||| Sbjct 1272571 CAACATCCAGAAAGAGTCCAC 1272591 >seq420 Length=1427458 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||| | || || || ||||| ||||||||||| |||| || ||| || Sbjct 1349897 AAGATGCAGATTTTCATGAAGACCCTTACGGGGAAAACCATCACGATCGAGGTTGAACCC 1349838 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | ||| | |||| || || | | || || || || ||| | ||| Sbjct 1349837 TCGGACACTATAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCCCCTGAC 1349778 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 | ||| | || |||| || || || || ||||| || | | || | |||||| Sbjct 1349777 CGGCAGAGGCTGATCTTTGCTGGTAAGCAACTGGAAGATGGCCATACTTTGTCTGACTAC 1349718 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||||||| |||||| |||| || ||||| |||||| Sbjct 1349717 AACATCCAAAAGGAGTCCACCCTTCATCTTGTGTTG 1349682 >seq302 Length=1732574 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || ||||| |||||||||| |||| || ||| || Sbjct 218266 AAGATGCAGATTTTCGTGAAGACCCTTACGGGGAAAACCATCATGATCGAAGTTGAACCC 218325 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | ||| | |||| || || | || || || || || || | ||| Sbjct 218326 TCAGACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAC 218385 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | || |||| || || || || ||||| || | | || | || ||| Sbjct 218386 CAGCAGAGGCTGATCTTTGCTGGTAAGCAACTGGAAGATGGCTGTACTTT----GATTAC 218441 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||||||| |||||| |||| || ||||| |||||| Sbjct 218442 AACATCCAAAAGGAGTCCACCCTTCATCTTGTGTTG 218477 >seq9 Length=5865362 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || | ||||| || |||||||| | || ||||| || Sbjct 1316050 AACATGCAGATCTTTGTGAAGACCATGACGGGAAAGACCATCACTCTTGAGGTCGAGCCC 1315991 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | || | | | || || ||||| || || | || || || ||||| || | || Sbjct 1315990 AGTGGCACCATCAAGAATGC-CAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCTGA 1315932 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| |||| || | || ||||| |||||||| || | | || ||| ||||| Sbjct 1315931 CCAGCAGAGACTGATATTTGCCGGCAAGCAGCTGGAGGATGGCCACATCCTGTCAGACTA 1315872 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||||||||| ||| |||| |||| | ||| | ||| Sbjct 1315871 CAACATCCAGAAAGAGTCCACCTTGCACTTGGTGCTTCGC 1315832 >seq8911 Length=5159 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/227 (68%), Gaps = 8/227 (4%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATC-ACCGTCGACGTCGAAGC 40745 |||| |||||| ||||| ||||| || || ||||| || || ||| | || || || | Sbjct 1430 AAAAGGCAAATCTTCGTGAAAACCCTGACTGGCAAGACAGTCCACCTTAGAGGTGGAGCC 1371 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 || |||| | | | | |||||| || || | || |||||||||||| || | Sbjct 1370 CAGTGACACCATCGAGAATGTCAAGGCCAAGATCCGGGATAAAGAGGGCATCACCCCCCC 1311 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| || |||||||||| || |||| || ||||| || | || ||| || Sbjct 1310 CCAACATCGACTCATCTCTGCCAGCAAGCAACTGGAAGATG-------GCTTTCCGATTA 1258 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGG 40912 |||||||||| | | | |||| ||||| || || | || |||||| Sbjct 1257 CAACATCCAGGAAGGGTCCACCCTGCACCTGGTCCTCCGTGTGAGGG 1211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514516234923520