Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1138 84.2 2e-11 >seq1138 Length=537340 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954 || || || || ||||| | |||||||| | |||| || ||||||||||| || || Sbjct 330889 TTCGACATCACCCCCATCCTCTGATATTCCCCCACTCGCTTCTCAAAGAAGTTTGTCTTT 330948 Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13993 ||||| ||||| || |||||||| || |||||||||||| Sbjct 330949 CCTTCTAGTGAAATGTTTTCCATGAAGTCAAATGGATTT 330987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481687487663360