Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq474 93.3 3e-14 >seq474 Length=1313924 Score = 93.3 bits (102), Expect = 3e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 ||||||| || || | ||||||| | || |||||||| ||||| || |||||||||| Sbjct 1049984 TGGCCTTCGCCGCCGGAGAAGGCGGTTTCTTCTCTGGGTCGTTTGCTGCTATATTCTGGC 1049925 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||| | ||||||||||| | ||||||| |||||| |||| ||| | |||| Sbjct 1049924 TGAAGAAGAGAGGCCTCATGCCAGGACTCACGTTTTCAAACGAGCTGATCAGCAGGGACG 1049865 Query 22868 A 22868 | Sbjct 1049864 A 1049864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355759706004256