Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1138 86.0 9e-12 >seq1138 Length=537340 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 ||||| || || ||||| ||||| |||||||| || ||| |||||| | || || ||| Sbjct 332866 GTGGCCTTTGCTGCCGTGGAGGGGATCTTCTTCTCTGGTTCTTTTGCATCAATATTCTGG 332807 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521 ||||||||||| ||||| |||||||| || || Sbjct 332806 CTCAAGAAGCGGGGACTGATGCCCGGCCTCAC 332775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740048098827520