Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq4348 84.2 2e-11 >seq4348 Length=50416 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 130717 ATGTCCAATTTTTTGAATCTTCAGAAAAGTAAAAGCATTTATATCCAAATCCAATCCATC 130776 ||||||| ||| ||| |||||||||||||||||| |||||| ||||||||||||||| Sbjct 39872 ATGTCCAGTTTCTTGTATCTTCAGAAAAGTAAAAACATTTACTTCCAAATCCAATCCAGT 39931 Query 130777 CCTTTGGGCAAGTAACATA 130795 | ||||||| || |||| Sbjct 39932 CTCTTGGGCAGGTGGCATA 39950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531175074548480