Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2476 87.8 2e-12 >seq2476 Length=158986 Score = 87.8 bits (96), Expect = 2e-12 Identities = 103/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 20263 AGTTAAG-AGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACC 20321 || |||| |||| ||||||||||||||| || || || |||| ||||| ||||| |||| Sbjct 45724 AGGTAAGCAGGGCATAGCTGGCAATGTTGAAGGGCACACCCAGGCCCATATCTCCTGACC 45665 Query 20322 TCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGAC 20381 |||| || || || || || ||||| || | | ||||| |||||||| | || | Sbjct 45664 TCTGGTAAAGTTGGCAAGACAGCTCCCCATTTTCCACATAGAATTGACAGAGGGCATGGC 45605 Query 20382 AGGGCGGAAGCGCCATCA 20399 | || || || ||||||| Sbjct 45604 AAGGAGGCAGTGCCATCA 45587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440770590951680