Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq259 100 3e-16 >seq259 Length=1927424 Score = 100 bits (110), Expect = 3e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| ||| | || ||||| || | |||||||||||||| || ||||||| ||||| | Sbjct 1895391 AGGGTTACTTGGGTTGCCAAACCTTATCAGAAATGATCCAGTTTTACCTGGTAGAAGTGA 1895332 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 |||| ||||| || ||||| | ||| ||| ||| || ||| | || ||| |||| || | Sbjct 1895331 TGCCCCAGGCAGAGAACCATGGCCCAGAAATCAAGGAGCATTTGAACTCTCTGGGAGAGA 1895272 Query 9981 ATCTAAAGACCCT 9993 | || |||||||| Sbjct 1895271 AGCTGAAGACCCT 1895259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551962673198080