Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2071 316 2e-80 seq2038 235 4e-56 seq43 185 7e-41 seq2611 116 3e-20 seq169 102 6e-16 seq609 98.7 7e-15 seq1313 95.1 9e-14 seq323 91.5 1e-12 >seq2071 Length=224109 Score = 316 bits (350), Expect = 2e-80 Identities = 967/1475 (66%), Gaps = 30/1475 (2%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||| | |||| ||||| || || ||||||||||| | ||||| ||||| ||||| Sbjct 59875 TTATCTACAGCAGAGACATTGAGGATGCCATTGGCATCAATGTCAAAAGTGACGTCAATC 59816 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 ||||| || || | | || || ||||| ||| | | ||| |||| || || Sbjct 59815 TGAGGAACACCACGGGGTGCTGGAGGGATGCCTGTAAGTTCAAACTTTCCAAGCAGGTTG 59756 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 ||||| || || | | ||| || || | | || || || ||| ||||| Sbjct 59755 TTATCCTTGGTCATGGCCCTTTCGCCTTCATAGACCTGAATGAGCACACCAGGCTGATTG 59696 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAAT 517488 || ||||| || || || | |||| | | || ||| || || || || | | || Sbjct 59695 TCGGAATAGGTAGTGAA-AGTCTGTGTCTGCTTGGTAGGGATGGTGGTATTGCGCTTGAT 59637 Query 517489 AATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 517548 | ||||| | ||||| || ||||| | ||||| ||||||||||||||||| | Sbjct 59636 GAGGACAGTCATGACTCCACCAGCAGTTTCAATGCCAAGGGAAAGAGGAGTGACATCCAA 59577 Query 517549 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 517608 || | | || |||| || ||| | | ||| ||||| || || || | ||| Sbjct 59576 GAGCAACAAATCCTGAACATTCTCAGACTTGTCTCCAGATAGAATGGCCGCCTGGACAGC 59517 Query 517609 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 517668 |||||||| |||||| ||||||| | |||| | | ||| |||| ||| |||||||| Sbjct 59516 TGCACCATAAGCAACAACTTCATCGGAGTTAATGCTCTTATTCAGTTCTTTTCCATTGAA 59457 Query 517669 AAAATTTGAAAGAAGTTGTCTTAC-CTT-AGGAATACGAGATGATCCTCCAACTAATACA 517726 || | | ||||| | ||| | ||| |||| | | | || | || || || ||| Sbjct 59456 GAAGTCTTGCAGAAGCT-TCTGAATCTTGAGGATTGTG-GTGGAATCACCCACCAAGACA 59399 Query 517727 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 517786 || ||||| | |||||| || || ||||| | ||| | | || || || || || Sbjct 59398 ATGTCATGGATCTGTGACTTGTCTAGTTTAGCATCTCGAAGGGCCTTCTCTACAGGGTCC 59339 Query 517787 AGACCCGCTCTAAACAAGTCTGAACAA--AGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 517844 ||| ||| |||| ||| |||| | |||||||||| ||| | || | | Sbjct 59338 AGAGTGCCTCCGAACAGGTC--AACATTCAATTCTTCGAATCGAGCATGGGGAATGGAGG 59281 Query 517845 CATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTC--GAAGA 517902 || |||||||||| || | | |||||||| ||||| | | || || | || Sbjct 59280 TATAGAAATCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGG 59221 Query 517903 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TG 517958 ||| |||||| || || |||||||| || || | || | | | ||| | | Sbjct 59220 AGAGGGTGCACTTT--GCCCGTTCACAGGCAGTACACAGACGCCTGACAGCTCTCTTGTT 59163 Query 517959 CTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--AC 518016 || |||| || | || | |||| ||| || || ||| | ||| | || Sbjct 59162 CTCGCTGATG----TCCTTCTTGTGCTTTCGCTTAAACTCAGCAATGAA--ATGGTTGAC 59109 Query 518017 AAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTG 518076 | | |||||||| ||||| || ||||| | || | ||| | || | | | |||| Sbjct 59108 CATTCTGTTATCAAAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTC 59049 Query 518077 GAAAAGT-CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAA 518135 |||| | ||||| |||| || || | || |||||| || ||||| |||| |||| Sbjct 59048 AAAAAATTCCATCCTCAATAGTGAAGATAGACACATCAAAAGTACCACCTCCCAAGTCAA 58989 Query 518136 AAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAG 518195 |||| || |||||| |||| | || ||||| || ||||| |||| |||||||| Sbjct 58988 AAATGAGCACATTCCTTTCAGCTCCAACCTTCTTATCTAGCCCATAAGCAATAGCAGCAG 58929 Query 518196 CAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAG 518255 ||||||||||||| |||||||||| ||||| || |||||||| |||| |||||||| | Sbjct 58928 CAGTTGGTTCATTGATAATTCTCAGGACATTCAGGCCAGCAATAGTTCCAGCATCTTTTG 58869 Query 518256 TGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTT 518315 | || |||| || ||||| || || || || || || || | || |||| || || Sbjct 58868 TAGCCTGTCGCTGAGAATCATTGAAGTAGGCCGGCACTGTGACCACAGCATTGGTAACAG 58809 Query 518316 CTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGA-AATT 518374 || || | ||| || ||| ||| ||||| || | | || ||| | || || Sbjct 58808 TCTTCCCGAGATAGGCTTCTGCAATTTCCTTCATCTTGGTCAGAACCATAAAGGACAACC 58749 Query 518375 TGTTCTGGGGA-ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATT 518433 | |||||| | | | | ||| | |||| ||| ||||| | | || | Sbjct 58748 TCCTCTGGGTAGAAACTTTTTGCCTCTCCTTTG-TATTCTACTTGGACCTTGGGCCTGCC 58690 Query 518434 ACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATT 518493 || | || | || | || ||||||| |||||||| || |||||| |||| Sbjct 58689 TGCATCGTTCACCACCATGAAGGGCCAGTGCTTCATATCAGACTGAACAACAGCATCATC 58630 Query 518494 AAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGC 518553 ||| | || || | ||||| |||||||||| || ||||| || || |||||| | Sbjct 58629 AAACCTACGTCCGATCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAAC 58570 Query 518554 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGG 518613 |||| || || ||||| ||||| | ||||||| || ||||| | |||||| ||| Sbjct 58569 CTGATTCTTCGCGGCATCCCCAATTAATCGTTCTGTGTCAGTAAAAGCAACATAGCTTGG 58510 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 518673 || || || ||||| || ||||| ||||| || || ||||| |||| || | ||||| Sbjct 58509 CGTGGTTCGGTTACCCTGGTCATTGGCAATTATCTCCACTTTTCCATGCTGGAAGACACC 58450 Query 518674 TACACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708 ||||| | || || || | ||||||||||| Sbjct 58449 CACACAGGAGTAGGTGGTGCCAAGATCAATACCAA 58415 >seq2038 Length=229302 Score = 235 bits (260), Expect = 4e-56 Identities = 466/686 (68%), Gaps = 3/686 (0%) Strand=Plus/Plus Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 |||||||| ||||| || ||||| | || | ||| | || | | | |||| |||| | Sbjct 35608 TTATCAAAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTC-AAAATT 35666 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 ||||| |||| || | | || |||||| || ||||| |||| |||||||| || Sbjct 35667 CCATCCTCAATAGTGAGGATAGACACATCAAAAGTACCACCTCCCAAGTCAAAAATGAGC 35726 Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 |||||| |||| | || ||||| || ||||| |||| |||||||||||||||| Sbjct 35727 ACATTCCTTTCAGCTCCAACCTTCTTATCTAGCCCATAAGCAATAGCAGCAGCAGTTGGT 35786 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 ||||| ||||||| || ||||| || ||| |||| |||| |||||||| || || ||| Sbjct 35787 TCATTGATAATTCGCAGGACATTGAGGCCAACAATAGTTCCAGCATCTTTTGTAGCCTGT 35846 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 | || ||||| || || || || || || || | || |||| || || || || Sbjct 35847 CGCTGAGAATCATTGAAGTAGGCCGGCACTGTGACCACAGCATTGGTAACAGTCTTCCCG 35906 Query 518324 ATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG 518383 | ||| || ||| ||| ||||| || | | || ||| || || | | |||||| Sbjct 35907 AGATAGGCTTCTGCAATTTCCTTCATCTTGGTCAGAACCATAGAGGACACCTCCTCTGGG 35966 Query 518384 GA-ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT 518442 | | | | ||| | |||| ||| ||||| | | || | || | || Sbjct 35967 TAGAAACTTTTTGCCTCTCCTTTG-TATTCTACTTGGACCTTGGGCCTGCCTGCATCGTT 36025 Query 518443 AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 518502 | || | || ||||||| |||||||| || |||||| |||| ||| | Sbjct 36026 CACCACCATGAAGGGCCAGTGCTTCATATCAGACTGAACAACAGCATCATCAAACCTACG 36085 Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562 || || | ||||| |||||||||| || ||||| || || |||||| | |||| || Sbjct 36086 TCCGATCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTT 36145 Query 518563 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 518622 || ||||| ||||| | ||||||| || ||||| | |||||| ||| || || || Sbjct 36146 CGCGGCATCCCCAATTAATCGTTCTGTGTCAGTAAAAGCAACATAGCTTGGCGTGGTTCG 36205 Query 518623 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACT 518682 ||||| || ||||| ||||| || || || || |||| || | ||||| ||||| Sbjct 36206 GTTACCCTGGTCATTGGCAATTATCTCCACCTTTCCATGCTGGAAGACACCCACACAGGA 36265 Query 518683 AAAAGTTGTTCCTAAATCAATACCAA 518708 | || || || | ||||||||||| Sbjct 36266 GTAGGTGGTGCCAAGATCAATACCAA 36291 >seq43 Length=4087121 Score = 185 bits (204), Expect = 7e-41 Identities = 783/1220 (64%), Gaps = 30/1220 (2%) Strand=Plus/Plus Query 517506 CACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAA 517565 |||| || ||||| | |||||| ||||||||||||||||| | || | | || |||| Sbjct 1517823 CACCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAAGAGCAACAAATCCTGAA 1517882 Query 517566 GTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAG 517625 || ||| | | |||| ||||| || | || | ||| |||||||| |||||| Sbjct 1517883 CATTCTCAGATTTGTCACCAGATAGAATGGCCTCCTGGACAGCTGCACCATAAACAACAG 1517942 Query 517626 CTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTT 517685 |||||||||| |||| | | ||| | || ||| |||| ||| || | |||||| | Sbjct 1517943 CTTCATCAGGGTTAATGCTCTTATTCACTTCTTTTCCATGGAAGAAGCCTTGAAGAAGCT 1518002 Query 517686 GTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT 517744 ||| | ||| || || | || || || || ||||| ||||| ||||| | |||||| Sbjct 1518003 -TCTGAATCTTGGGGATGCTGGAAGAGCCACCCACTAAGACAATGTCATGGATCTGTGAC 1518061 Query 517745 TTATCCAGTTTTGAATC-CAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAA 517803 || || ||||| | ||| | | | ||||| |||| || || || |||| Sbjct 1518062 TTGTCTAGTTTAGCATCTCGAGGGGTC-TTTTCTGCGGGGTCCAGCGTGCCTTGGAACAG 1518120 Query 517804 GTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTC 517863 ||| | | | |||||| ||| ||| | || | | | | |||| ||||| | Sbjct 1518121 GTCAGCATTCAATTCTTCAAATCGAGCACAGGTGATGGAGGTTTAGAAATCGATTCCCTT 1518180 Query 517864 GAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACG 517923 | | | |||||||| ||||| | | || || || || || | || || || | Sbjct 1518181 GTAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGGGTGCGCTTTGCCCC 1518240 Query 517924 TTCACATGCTGTCCTTAGTCTTC-GTAAG---GCTTTTGCTGATTGATTCAAATCTGTTT 517979 |||||| || || | |||| | | || ||| | || |||| || | | Sbjct 1518241 TTCACAGGCAGTACGCAGTCGCCTGACAGCTCTCTTGTTCTCGCTGAT----GTCCTTCT 1518296 Query 517980 TATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTC 518037 | |||| ||| || || ||| | ||| | || | | |||||||| ||||| Sbjct 1518297 TGCGCTTTCGCTTAAACTCAGCAATGAA--ATGGTTGACCATTCTGTTATCAAAGTCTTC 1518354 Query 518038 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 518097 || ||||| | ||| | || | || | | | |||| |||| |||||| |||| || Sbjct 1518355 TCCACCCAAGTGAGTGTCTCTAGCTGTTGATTTGACTTCAAAAATTCCATCCTCAATAGT 1518414 Query 518098 CAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 518157 | | || |||| | | || || |||| ||||||| || | |||| |||| Sbjct 1518415 TAGGATAGACACATTAGAAATACCTCCTCCCAAGTCAAAAACGAGCA-ATTCCTTTCAGC 1518473 Query 518158 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 | || ||||| || ||||| |||| ||||||||||||||||||||| ||||||| Sbjct 1518474 TCCAACCTTCTTATCTAGTCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTCA 1518533 Query 518218 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 518277 ||||| || |||||||| |||| ||||||| || || ||| || ||||| || Sbjct 1518534 AGGCACATTGAGGCCAGCAATAGTTCCATCATCTTTTGTAGCCTGTTGCTGAGAATCATT 1518593 Query 518278 AAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGC 518337 || || | || || || | || |||| || || | | | ||| || || Sbjct 1518594 GAAGTAGACTGGCACTGTGACCACAGCATTCGTAACAGTCATCCTGAGATAGGCCTCTGT 1518653 Query 518338 CGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGA-ATATTGCTTGG 518396 || ||||| || | | || ||| || || | | |||||| | | ||| ||| Sbjct 1518654 GAGTTCCTTCATCTTGGTCAGAACCATAGAGGACACCTCCTCTGGGTACAAATTTTTTGC 1518713 Query 518397 ATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATG 518456 || |||| ||| | ||| | | || | || |||| | || | || | Sbjct 1518714 CTTTCCTTTG-TATTCTGCTTGGACCTTGGGCCTCCCTGCATCATTCACCACCATGAAGG 1518772 Query 518457 GCCAGTATTTCA------TATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTA 518510 |||||| | | |||| || |||||| |||| ||| | | ||| | | Sbjct 1518773 GCCAGTGCTGAACAACAGTATCAGACTGAACAACAGCATCATCAAACTTACGTCCAGTCA 1518832 Query 518511 ATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCAT 518570 | ||| |||| ||||| || ||||| || || |||||| | |||| || | |||| Sbjct 1518833 GACATTTGGCATAAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTCGAAGCAT 1518892 Query 518571 CTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTT 518630 | ||||| | |||||| || ||||| | |||||| | | || || || ||||| | Sbjct 1518893 C-CCAATTAATCATTCTGTGTCAGTAAAAGCAACATAGTTTAGCGTGGTTCGGTTACCCT 1518951 Query 518631 GATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA--ACTAAAAGT 518688 | ||||| ||||| || || || || |||| || | ||||| ||||| | || | | Sbjct 1518952 GGTCATTGGCAATTATCTCCACCTTTCCATGCTGGAAGACACCCACACAGGAGTACA--T 1519009 Query 518689 TGTTCCTAAATCAATACCAA 518708 || || | ||||||||||| Sbjct 1519010 GGTGCCAAGATCAATACCAA 1519029 >seq2611 Length=146480 Score = 116 bits (128), Expect = 3e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || ||||| || ||||| |||| ||||||||||||||||||||| ||||||| || ||| Sbjct 62566 TTCTTATCTAGCCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTCGCAGGACA 62507 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || |||||||| |||| |||||||| || || |||| || ||||| || || || Sbjct 62506 TTCAGGCCAGCAATAGTTCCAGCATCTTTTGTAGCCTGTCGCTGAGAATCATTGAAGTAG 62447 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 || || || || | || |||| Sbjct 62446 GCTGGCACTGTGACCACAGCAT 62425 Score = 111 bits (122), Expect = 1e-18 Identities = 360/552 (65%), Gaps = 14/552 (3%) Strand=Plus/Minus Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 |||||||| |||||||||||||| || |||| | | ||| |||| ||| |||||||| Sbjct 63203 GCACCATAAGCAACAGCTTCATCGGGGTTAATGCTCTTATTCAGTTCTTTTCCATTGAAG 63144 Query 517670 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 || | | ||||| | ||| | ||| || || | | || || || || || ||||| Sbjct 63143 AAGTCTTGCAGAAGCT-TCTGAATCTTGGGGATTCTGGTGGAACCACCCACCAAGACAAT 63085 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||||| | |||||| || || ||||| | ||| | | || || || || || || Sbjct 63084 GTCATGGATCTGTGACTTGTCTAGTTTAGCATCTCGAAGGGCCTTCTCTACAGGGTCCAG 63025 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848 | ||| |||| ||| | | | |||||||||| ||| | |||| | | || Sbjct 63024 AGTGCCTCGGAACAGGTCAGCATTCAATTCTTCGAATCGAGCACGGGTAATGGAGGTATA 62965 Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908 |||||||||| || | | |||||||| ||||| | | || || || || || Sbjct 62964 GAAATCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAG 62905 Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTC-GTAAG---GCTTTTGCTGATT 517964 | || || || |||||||| || || | || | | | || ||| | || | Sbjct 62904 GGTGCGCTTTGCCCGTTCACAGGCAGTACGCAGACGCCTGACAGCTCTCTTGTTCTCGCT 62845 Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 518022 ||| || | || | |||| ||| || || ||| | ||| | || | | Sbjct 62844 GAT----GTCCTTCTTGTGCTTTCGCTTAAACTCAGCAATGAA--ATGGTTGACCATTCT 62791 Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 |||||||| ||||| || ||||| | || | ||| | || | | | |||| |||| Sbjct 62790 GTTATCAAAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTCAAAAAT 62731 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 |||||| |||| || | | || |||||| || ||||| |||| |||||||| || Sbjct 62730 TCCATCCTCAATAGTGAGGATAGACACATCAAAAGTACCACCTCCCAAGTCAAAAATGAG 62671 Query 518143 TACATTCATTTC 518154 |||||| |||| Sbjct 62670 CACATTCCTTTC 62659 Score = 102 bits (112), Expect = 6e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||| || ||||| || || |||||| | |||| || || ||||| ||||| | Sbjct 61832 CAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTCGCGGCATCCCCAATTAATC 61773 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 ||||||| || ||||| | |||||| ||| || || || ||||| || ||||| |||| Sbjct 61772 GTTCTGTGTCAGTAAAAGCAACATAGCTTGGCGTGGTTCGGTTACCCTGGTCATTGGCAA 61713 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | || || || || |||| || | ||||| ||||| | || || || | ||||| Sbjct 61712 TTATCTCCACCTTTCCATGCTGGAAGACACCCACACAGGAGTAGGTGGTGCCAAGATCAA 61653 Query 518703 TACCAA 518708 |||||| Sbjct 61652 TACCAA 61647 >seq169 Length=2346696 Score = 102 bits (112), Expect = 6e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052 ||| ||||| || ||||| ||||| ||||| ||||||||| | || || | ||||| Sbjct 838488 TGTTGTAGCTACTATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAAAGTTAT 838429 Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 ||||||||| ||||| ||| | || ||| ||||| || ||||| |||||||| || || Sbjct 838428 TCATTATGGCGCTCCTAAGGAAATGGAATCCTATTACCAGGAAATCGGTAGAGCTGGCCG 838369 Query 367113 TGATGG 367118 |||||| Sbjct 838368 TGATGG 838363 >seq609 Length=1049191 Score = 98.7 bits (108), Expect = 7e-15 Identities = 141/197 (72%), Gaps = 5/197 (3%) Strand=Plus/Plus Query 518110 ATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTT 518169 |||| |||||||||||| | |||| | | | || | |||| || |||| ||| Sbjct 131904 ATCAAAGGTTCCACCACCTAAATCATACACAG---CAATGATTT--TTATCTTCAGATTT 131958 Query 518170 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 518229 || |||||||| || | |||||||| || ||||||||||| | || | ||||| || Sbjct 131959 GTCCAGACCATAGGCCAGGGCAGCAGCTGTAGGTTCATTAATCACTCGAAGTACATTTAG 132018 Query 518230 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 518289 |||| || || ||||| ||||| || |||| |||||| || || ||||| ||||| Sbjct 132019 CCCAGATATCTGGCCAGCATCCTTAGTAGCCTGTCGTTGTGAGTCATTGAAATAAGCAGG 132078 Query 518290 AACAGTAATAACGGCAT 518306 || || || || |||| Sbjct 132079 GACTGTGATCACAGCAT 132095 >seq1313 Length=439396 Score = 95.1 bits (104), Expect = 9e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 635439 AATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTA 635498 ||||||| || || | || |||||||| ||||| |||||| | || | || |||||| Sbjct 263461 AATGTACACTTATCCTAACTGAGGGAGACTCAGCCAAAACACTGGCAGTTTCAGGTCTTG 263402 Query 635499 ATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTA 635558 |||| ||||||||||| | ||||| || || || |||||||||||| | | ||||| Sbjct 263401 GTGTTGTTGGAAGAGATAAATATGGGGTATTTCCTCTTAGAGGAAAAATACTCAATGTGC 263342 Query 635559 GGGATGCTAGTCCTAAA 635575 | || ||| || |||| Sbjct 263341 GAGAAGCTTCTCATAAA 263325 >seq323 Length=1674160 Score = 91.5 bits (100), Expect = 1e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 518167 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 518226 ||| || |||||||| || | |||||||| || ||||||||||| | || | ||||| Sbjct 474219 TTTGTCCAGACCATAGGCCAGGGCAGCAGCTGTAGGTTCATTAATCACTCGAAGTACATT 474160 Query 518227 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 || |||| || || ||||| ||||| || |||| |||||| || || ||||| || Sbjct 474159 TAGCCCAGATATCTGGCCAGCATCCTTAGTAGCCTGTCGTTGTGAGTCATTGAAATAAGC 474100 Query 518287 AGGAACAGTAATAACGGCAT 518306 ||| || || || || |||| Sbjct 474099 AGGGACTGTGATCACAGCAT 474080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3775405918213312