Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2071 477 1e-129 seq969 318 7e-82 seq149 315 9e-81 seq2038 297 2e-75 seq43 266 4e-66 seq2611 221 2e-52 >seq2071 Length=224109 Score = 477 bits (528), Expect = 1e-129 Identities = 1064/1588 (67%), Gaps = 12/1588 (1%) Strand=Plus/Minus Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||| ||||||||| |||| ||||| || || || ||||| || | |||||| || || || Sbjct 59990 CTTCTCATCTTCAGCTTTGTACTTCTCAGCTTCCTGGACAATGTGTTCAATATCCTCCTT 59931 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684 || | ||| ||||||| || || | ||||| | || || | | |||||| Sbjct 59930 GCTCAAGCGGCCCGTATCATTGGTGATAATGATCTTGTTCTCCTTGCCTGTGCTCTTATC 59871 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 | ||||| ||||| | || ||||| ||||||| || || | || | ||| || || Sbjct 59870 TACAGCAGAGACATTGAGGATGCCATTGGCATCAATGTCAAAAGTGACGTCAATCTGAGG 59811 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 ||| | ||||| | || || || || | ||||| | ||||| | ||||||| Sbjct 59810 AACACCACGGGGTGCTGGAGGGATGCCTGTAAGTTCAAACTTTCCAAGCAGGTTGTTATC 59751 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 | | | | | | ||| ||||||||||| | ||| ||| |||| ||||| || Sbjct 59750 CTTGGTCATGGCCCTTTCGCCTTCATAGACCTGAATGAGCACACCAGGCTGATTGTCGGA 59691 Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 || | ||| | ||| | ||| | || || || ||||| | | || | Sbjct 59690 ATAGGTAGTGAAAGTCTGTGTCTGCTTGGTAGGGATGGTGGTATTGCGCTTGATGAGGAC 59631 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 ||||| | ||||| |||||| | ||||| || ||||| || || |||||||| || Sbjct 59630 AGTCATGACTCCACCAGCAGTTTCAATGCCAAGGGAAAGAGGAGTGACATCCAAGAGCAA 59571 Query 6985 CAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044 || || |||||| || | || || | || ||||| || ||||| | || || Sbjct 59570 CAAATCCTGAACATTCTCAGACTTGTCTCCAGATAGAATGGCCGCCTGGACAGCTGCACC 59511 Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC 7104 || || || | ||||||| |||||| | |||||||||||||| || || || | || Sbjct 59510 ATAAGCAACAACTTCATCGGAGTTAATGCTCTTATTCAGTTCTTTTCCATTGAAGAAGTC 59451 Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164 | | | ||||| || ||||| || || |||| ||||| || || |||| Sbjct 59450 TTGCAGAAGCTTCTGAATCTTGAGGATTGTGGTGGAATCACCCACCAAGACAATGTCATG 59391 Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTT 7224 | | || || || | || | |||||||| | || || ||||| |||| | Sbjct 59390 GATCTGTGACTTGTCTAGTTTAGCATCTCGAAGGGCCTTCTCTACAGGGTCCAGAGTGCC 59331 Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATC 7284 | ||||| ||| | | || ||| || || || ||| ||| |||||| ||||||||||| Sbjct 59330 TCCGAACAGGTCAACATTCAATTCTTCGAATCGAGCATGGGGAATGGAGGTATAGAAATC 59271 Query 7285 AACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCG 7344 || || || || | |||||||| ||||| | | || | | || || | || | Sbjct 59270 AATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGGGTGCA 59211 Query 7345 CTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC 7404 |||||| || ||||| || || | | ||| | | || | | ||| || || || Sbjct 59210 CTTTGCCCGTTCACAGGCAGTACACAGACGCCTGACAGCTCTCTTGTTCTCGCTGATGTC 59151 Query 7405 TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATC 7464 ||||| || || || |||||||| || ||| || | | ||| ||| || || Sbjct 59150 CTTCTTGTGCTTTCGCTTAAACTCAGCAATGAAATGGTTGACCATTCTGTTATCAAAGTC 59091 Query 7465 TTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGA-TACCTCCTTCAA 7523 ||| ||||||||||| || || || || || | |||||||||||| | | || | |||| Sbjct 59090 TTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTCAAAAAATTCCATCCTCAA 59031 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 | | || | || |||||||| |||||||| |||| |||||||||||| || ||| | | Sbjct 59030 TAGTGAAGATAGACACATCAAAAGTACCACCTCCCAAGTCAAAAATGAGCACATTCCTTT 58971 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | | | |||||||| || || || || ||||| || || ||||||||||| |||| Sbjct 58970 CAGCTCCAACCTTCTTATCTAGCCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAA 58911 Query 7644 TACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 | | || ||| |||||||||||||||||| | |||||||| || || ||||| || ||| Sbjct 58910 TTCTCAGGACA-TTCAGGCCAGCAATAGTTCCAGCATCTTTTGTAGCCTGTCGCTGAGAA 58852 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 || || ||||||||||| || || || || || | || || |||| |||||||| | | Sbjct 58851 TCATTGAAGTAGGCCGGCACTGTGACCACAGCATTGGTAACAGTCTTCCCGAGATAGGCT 58792 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA-AATCTCTTC-AGCCGCAAACT 7820 || || || || ||||| ||||| |||||||| | || || ||| || | ||||| Sbjct 58791 TCTGCAATTTCCTTCATCTTGGTCAGAACCATAAAGGACAACCTCCTCTGGGTAGAAACT 58732 Query 7821 GTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAA 7880 ||| | || || || | || |||| | | |||| | | ||| || | | Sbjct 58731 -TTTTGCCTCTCCTTTGTATTCTACTTGGACCTTGGGCCT---GCCTGCATCGTTCACCA 58676 Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 || | | | ||| | |||||||| || || || |||| | | ||||| Sbjct 58675 CCATGAAGGGCCAGTGCTTCATATCAGACTGAACAACAGCATCATCAAACCTACGTCCGA 58616 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 | ||||| || ||||||||||||||||| |||||||||| || || |||||||| | Sbjct 58615 TCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTCGCGG 58556 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 | ||||| || | ||||| | || ||||| || || || ||| || ||||| | Sbjct 58555 CATCCCCAATTAATCGTTC---TGTGTCAGTAAAAGCAACATAGCTTGGCGTGGTTCGGT 58499 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120 | || ||||| || ||||| || || || | | || |||| || || || || | Sbjct 58498 TACCCTGGTCATTGGCAATTATCTCCACTTTTCCATGCTGGAAGACACCCACACAGGAGT 58439 Query 8121 ACGTTGTTCCTAAATCAATACCGATTGC 8148 | || || || | ||||||||| | ||| Sbjct 58438 AGGTGGTGCCAAGATCAATACCAACTGC 58411 >seq969 Length=663344 Score = 318 bits (352), Expect = 7e-82 Identities = 810/1228 (66%), Gaps = 16/1228 (1%) Strand=Plus/Minus Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | || ||| || || ||||| |||||||| || | ||||||||| | | | Sbjct 366125 GTCATCACGCCGCCCGCCGTCTCCAGTCCTAGAGACAGGGGAGCCACGTCCAACAAAAGC 366066 Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | ||||| || ||| | |||||| |||| || || || || |||| ||||||| Sbjct 366065 AAATCTTGTACCTTTTCAGACTTGTCACCCATTAAAATAGCCGCCTGCACCGCCGCCCCG 366006 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || |||||||| || ||||| || | || || || || |||||||| || ||| Sbjct 366005 TAGGCCACCGCCTCGTCCGGGTTGATGCTCTTGTTGAGGTCCCGTCCGTTAAAGTAGTCC 365946 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | || | || | || ||||| || || || || || |||| || || |||| Sbjct 365945 TGCAGCAGCTTCTGCACCTTGGGGATGCGCGTGGAGCCGCCCACCAGGACAATGTCATGG 365886 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACAT 7222 | ||| | || || ||||| | ||| ||||| | || || || || |||| | | | Sbjct 365885 ATTTTAGCCTTGTCCATCTTGGCGTCCCGAAGGGACTTCTCCACGGGCTCCAGGGTGCCT 365826 Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAA 7282 | ||| | ||| |||||| ||||| || || || || || ||||| || ||||| Sbjct 365825 CT---GAATAGGTCTGCACACAGCTCCTCGAACCGCGCCCGCGTGATGGACGTGTAGAAG 365769 Query 7283 TCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTT 7342 || | ||| ||| | | || || || || | | | | || | | || || | || Sbjct 365768 TCGATGCCCTCGAACAGGGAGTCGATCTCCAGGCTGGCCTGGGTGCTGGACGACAGGGTC 365709 Query 7343 CGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATA 7402 | ||| |||||||| || ||||| || | || || | || ||| ||| | || Sbjct 365708 CTCTTGGCGCGCTCGCAGGCCGTGCGCAGCCGCCGCACCGCGCGCTTGTTCTGGCTGATG 365649 Query 7403 TCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462 || ||||| || || | || ||||| || |||||| | | || | ||||| Sbjct 365648 TCCTTCTTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAGCCGGTTGTCGAAG 365589 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || || || |||| ||| || |||||||| || || || || || ||||| || | || Sbjct 365588 TCCTCGCCGCCCAGGTGGGTGTCCCCCGCCGTGGCCTTCACCTCGAAGATGCCGTCGTCG 365529 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 || | | | || || || ||||| || || |||||||| || ||||| |||| | | Sbjct 365528 ATCGTCAGGATGGACACGTCGAACGTGCCGCCCCCCAGGTCGAAGATGAGCACGTGCCTC 365469 Query 7583 TCGTCGT--CTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAA 7640 || | | ||| || |||| | ||||| ||||| || |||||||| || || || | Sbjct 365468 TCCCCATGACTTCCTT--TATCCAACCCGTAGGCGATGGCGGCCGCCGTGGGCTCGTTGA 365411 Query 7641 TAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCG 7700 |||| | || ||| || || || || |||| || || || || || || |||| Sbjct 365410 TAATTCTGAGCACGTTGAGTCCGGCGATGACACCCGCGTCCTTGGTGGCCTGGCGCTGCG 365351 Query 7701 AATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACG 7760 | || || || ||||| || ||||| | ||||||| ||||| || | ||| ||| | | Sbjct 365350 AGTCATTGAAATAGGCGGGCACCGTGATCACCGCGTTGGTGACATTGTGACCCAGAAAAG 365291 Query 7761 ATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACT 7820 || || | || ||||| || || || ||||| || || ||||| || | || Sbjct 365290 CCTCTGCAGTCTCCTTCATCTTCGTCAGCACCATGGACGAGATCTCCTCGGGGTAGAAGG 365231 Query 7821 GTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAA 7880 |||| | || || || | || | | |||| || |||| | | ||| | Sbjct 365230 CTTTCTTCTCTCCTTTGTAGGACACCAGCACCTTGGGCTTGCCCGCTTC---GTTGATCA 365174 Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 | | | | | |||| ||||| || || || | || |||||| || || | Sbjct 365173 CTTGAAATGGCCAAAGCTTCATGTCCGACTGTACAACAGGATCATTAAACTTCCTGCCAA 365114 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 | ||||| || ||||||||||| ||||| | |||||||||||| |||||||| || | Sbjct 365113 TTAGACGTTTGGCATCAAAAACAGTGTTCTGGGGGTTCATGGCCACCTGGTTCTTGGCGG 365054 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 |||| ||||| || || || | || || || || ||||| |||||||| || | Sbjct 365053 CGTCTCCGATCAGCCGCTC---GGTGTCGGTGAAGGCCACGTAGCTGGGGGTCGTGCGGT 364997 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120 | || |||||||| || || || || || | ||| || | ||||| |||||||| | Sbjct 364996 TGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACGCCCACGCACGAGT 364937 Query 8121 ACGTTGTTCCTAAATCAATACCGATTGC 8148 | || || |||| || || || || || Sbjct 364936 AGGTGGTGCCTAGGTCGATGCCTATGGC 364909 >seq149 Length=2479310 Score = 315 bits (348), Expect = 9e-81 Identities = 840/1270 (66%), Gaps = 34/1270 (3%) Strand=Plus/Minus Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955 || ||||| || || ||| || | ||||||||| | || || ||||||| ||| Sbjct 2206886 GGGATCGTGGTGTTCCTCTTGATGAGCGGGGTCATGACCCCGCCAGCGGTTTCGATACCA 2206827 Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGG---TCTTGAACAGATTCGTTCCCTT-- 7010 || ||||| || |||||||| ||||||||| || || ||| ||| | ||| Sbjct 2206826 AGCGACAGTGGAGTCACGTC---GAGTAACAGCAGATCCTGCACA--TTCTCTGACTTGT 2206772 Query 7011 CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAA 7070 | || | | ||| || || || || | || || || || |||||||| |||||||| | Sbjct 2206771 CGCCAATGAGGATAGCCGCCTGCACGGCGGCGCCATAGGCCACCGCCTCGTCGGGGTTGA 2206712 Query 7071 TCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGA 7130 | | |||||||| || || ||||| || ||||| | | | || || || |||| Sbjct 2206711 TGCTCTTATTCAGCTCCTTGCCGTTGAAGAAATCCTGCAGGAGCTTCTGGATCTTAGGGA 2206652 Query 7131 TTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGT 7190 | || || || || || |||| || || || | | | || || | ||| | | Sbjct 2206651 TGCGGGTGGAGCCGCCCACCAGCACAATCTCCTGGATCTGGCCCTTGTCCAGCTTGGCAT 2206592 Query 7191 CTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTT 7247 | || || | ||||| || || |||| | | | ||||| | ||| || | Sbjct 2206591 CGCGCAGCGCCTTTTCCACCGGCTCCAGGGTCCCT---CGGAAGAGGTCGGCGTTGAGCT 2206535 Query 7248 CCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAA 7307 |||| || || || ||||| ||||| || |||||||| ||||| ||||| | ||| || | Sbjct 2206534 CCTCGAAGCGGGCGCGGGTGATGGACGTGTAGAAATCCACGCCCTCGTAGAGCGAGTCGA 2206475 Query 7308 TTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTC 7367 | || ||| | | || | | ||| | || ||||| |||||||| || || || | Sbjct 2206474 TCTCGATGCTGGCCTGCGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCAGGCGGTGC 2206415 Query 7368 GTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACT 7427 | | || || | ||| ||| ||| ||| || ||||| ||||| || || |||| Sbjct 2206414 GCAGCCGGCGCACGGCGCGCTTGTTGGGCCCAATGTCCTTCTTGTGTTTGCGCTTGAACT 2206355 Query 7428 CTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCC 7487 | || | | ||| | | | | ||||| ||||| ||||||| |||||| || | Sbjct 2206354 CCTCCGCCAGGTGGCTCACCATACGGTTGTCGAAGTCTTCGCCACCCAGGTGTGTGTCTC 2206295 Query 7488 CCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACG 7547 | || || | || || || ||||| || | || ||| | | | || || || || | Sbjct 2206294 CGGCCGTGGACTTCACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAAGG 2206235 Query 7548 TACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTAT 7601 | || || ||||||||||| ||||| |||||| | ||| || || | ||||| | Sbjct 2206234 TGCCGCCGCCCAGGTCAAAGATGAGCACGTTCTTCTCGCCGCCTGCGCAGCCTTTCTTGT 2206175 Query 7602 CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGG 7660 | || || || ||||| ||||| ||||| || || || || || || || ||| || || Sbjct 2206174 CCAGGCCATAGGCGATGGCCGCTGCCGTGGGCTCGTTGATGATGCGCAGCACA-TTGAGC 2206116 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || | || || |||| ||||| || || || || ||||| ||||| || ||||| ||| Sbjct 2206115 CCCGTGATGGTGCCCGCGTCTTTGGTGGCCTGGCGCTGCGAGTCGTTGAAATAGGCGGGG 2206056 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || | ||||||| | || || || || || | ||| ||||| |||||||| Sbjct 2206055 ACGGTGATGACCGCGCTCTGCACCTTGCCCCCCAGGTAGGCTTCGGCGATCTCTTTCATC 2205996 Query 7781 TTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAA 7839 || || || ||||| || || ||||| || | | | | || ||| | || || ||| | Sbjct 2205995 TTCGTGAGGACCATGGAGGAGATCTCCTC-GGGGAAGAAGGTCTTCATCTCCCCTTTATA 2205937 Query 7840 ATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTT 7899 || || | | |||| || | || | || | || | ||| ||| | || Sbjct 2205936 TTCCACCTGCACTTTGGGCTT---CCCACCCTCGCTCACCACTCTGAACGGCCAGTGCTT 2205880 Query 7900 CATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAA 7958 ||| || || ||| || | |||| ||||| | ||||| || | ||| ||||| | Sbjct 2205879 CATGTCTGACTGCACC-GTGGCGTCCTCGAACTTCCGCCCGATCAGCCTCTTGGCATCGA 2205821 Query 7959 AAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTT 8018 | | ||||| ||||||||||||| ||||||||| || ||||| ||||| || || | Sbjct 2205820 AGATAGTGTTCGTGGGGTTCATGGCCACTTGGTTCTTGGCGGCGTCGCCGATGAGGCGCT 2205761 Query 8019 CATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAA 8078 | | || || || || ||||| ||||| || || || || |||||||| || | Sbjct 2205760 C---CGTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGA 2205704 Query 8079 TAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAA 8138 | || || || | | | ||| |||| || ||||| || || || || || | || | Sbjct 2205703 TGATCTCCACCTTGCCATGTTGGAAGACCCCCACGCAGGAGTATGTGGTGCCCAGGTCGA 2205644 Query 8139 TACCGATTGC 8148 | ||||| || Sbjct 2205643 TGCCGATAGC 2205634 >seq2038 Length=229302 Score = 297 bits (328), Expect = 2e-75 Identities = 521/751 (69%), Gaps = 11/751 (1%) Strand=Plus/Plus Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||| || || || |||||||| || ||| || | | ||| ||| Sbjct 35554 ATGTCCTTCTTGTGCTTTCGCTTAAACTCAGCAATGAAATGGTTGACCATTCTGTTATCA 35613 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||| ||||||||||| || || || || || | |||||||||||| | | |||| Sbjct 35614 AAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTCAAAATTCCATCCT 35673 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 |||| | | | || |||||||| |||||||| |||| |||||||||||| || ||| Sbjct 35674 -CAATAGTGAGGATAGACACATCAAAAGTACCACCTCCCAAGTCAAAAATGAGCACATTC 35732 Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639 | || | | |||||||| || || || || ||||| || || ||||||||||| Sbjct 35733 CTTTCAGCTCCAACCTTCTTATCTAGCCCATAAGCAATAGCAGCAGCAGTTGGTTCATTG 35792 Query 7640 ATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 ||||| || | |||| || |||||| |||||||| | |||||||| || || ||||| || Sbjct 35793 ATAATTCGCAGGACA-TTGAGGCCAACAATAGTTCCAGCATCTTTTGTAGCCTGTCGCTG 35851 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 ||||| || ||||||||||| || || || || || | || || |||| |||||||| Sbjct 35852 AGAATCATTGAAGTAGGCCGGCACTGTGACCACAGCATTGGTAACAGTCTTCCCGAGATA 35911 Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC-AGCCGCAA 7817 | ||| || || || ||||| ||||| |||||||| || || | ||| || | || Sbjct 35912 GGCTTCTGCAATTTCCTTCATCTTGGTCAGAACCATAGAGGACACCTCCTCTGGGTAGAA 35971 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 ||| ||| | || || || | || |||| | | |||| | | ||| || | Sbjct 35972 ACT-TTTTGCCTCTCCTTTGTATTCTACTTGGACCTTGGGCCT---GCCTGCATCGTTCA 36027 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 ||| | | | ||| | |||||||| || || || |||| | | || Sbjct 36028 CCACCATGAAGGGCCAGTGCTTCATATCAGACTGAACAACAGCATCATCAAACCTACGTC 36087 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 |||| ||||| || ||||||||||||||||| |||||||||| || || ||||||| Sbjct 36088 CGATCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTCG 36147 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || ||||| || | ||||| | || ||||| || || || ||| || |||| Sbjct 36148 CGGCATCCCCAATTAATCGTTC---TGTGTCAGTAAAAGCAACATAGCTTGGCGTGGTTC 36204 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || || ||||| || ||||| || || || | | || |||| || || || | Sbjct 36205 GGTTACCCTGGTCATTGGCAATTATCTCCACCTTTCCATGCTGGAAGACACCCACACAGG 36264 Query 8118 AATACGTTGTTCCTAAATCAATACCGATTGC 8148 | || || || || | ||||||||| | ||| Sbjct 36265 AGTAGGTGGTGCCAAGATCAATACCAACTGC 36295 Score = 109 bits (120), Expect = 7e-19 Identities = 284/433 (66%), Gaps = 0/433 (0%) Strand=Plus/Plus Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||| ||||||||| |||| ||||| || || || |||||||| |||||| || || || Sbjct 35018 CTTCTCATCTTCAGCTTTGTACTTCTCAGCTTCCTGGACCATGCGTTCAATATCCTCCTT 35077 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684 || ||||| || || || || || ||||| | || || | | |||||| Sbjct 35078 GCTCAAGAGGCCCTTGTCGTTGGTGATAGTGATCTTGTTCTCCTTGCCTGTGCTCTTATC 35137 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 | ||||| ||||| | || ||||| ||||||| || || | || | ||| || || Sbjct 35138 TACAGCAGAGACATTGAGGATGCCATTGGCATCAATGTCAAAAGTGACTTCAATCTGAGG 35197 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 ||| | ||||| | || || || || | ||||| | ||||| | ||||||| Sbjct 35198 AACACCACGGGGTGCTGGAGGGATGCCTGTAAGTTCAAACTTTCCAAGCAGGTTGTTATC 35257 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 | | | | | | ||| ||||||||||| | ||| ||| |||| ||||| || Sbjct 35258 CTTGGTCATGGCCCTTTCGCCTTCATAGACCTGAATGAGCACACCAGGCTGATTGTCGGA 35317 Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 || | ||| | ||| | ||| | || || || ||||| | | || | Sbjct 35318 ATAGGTAGTGAAAGTCTGTGTCTGCTTGGTAGGGATGGTGGTATTGCGCTTGATGAGGAC 35377 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 ||||| | ||||| |||||| | ||||| || ||||| || || |||||||| || Sbjct 35378 AGTCATGACTCCACCAGCAGTTTCAATGCCAAGGGAAAGAGGAGTGACATCCAAGAGCAA 35437 Query 6985 CAGGTCTTGAACA 6997 || || |||||| Sbjct 35438 CAAATCCTGAACA 35450 >seq43 Length=4087121 Score = 266 bits (294), Expect = 4e-66 Identities = 587/872 (67%), Gaps = 11/872 (1%) Strand=Plus/Plus Query 6943 AGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTC 7002 |||||| | ||||| || ||||| || || |||||||| |||| || |||||| || Sbjct 1517830 AGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAAGAGCAACAAATCCTGAACATTCTC 1517889 Query 7003 GTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATC 7062 ||||| | || ||||| | ||||| | || || || | || || ||||| Sbjct 1517890 AGATTTGTCACCAGATAGAATGGCCTCCTGGACAGCTGCACCATAAACAACAGCTTCATC 1517949 Query 7063 GGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGT-TGAA 7121 |||||||| | ||||||| |||||| || | || || || || | | |||| Sbjct 1517950 AGGGTTAATGCTCTTATTCACTTCTTTTCCATGGAAG-AAGCCTTGAAGAAGCTTCTGAA 1518008 Query 7122 TTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGA 7181 | || ||||| | | || ||||| || || || || |||| | | || || || | Sbjct 1518009 TCTTGGGGATGCTGGAAGAGCCACCCACTAAGACAATGTCATGGATCTGTGACTTGTCTA 1518068 Query 7182 TCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCA 7238 || | |||||| | || ||||| | || |||| | | || |||||| ||| Sbjct 1518069 GTTTAGCATCTCGAGGGGTCTTTTCTGCGGGGTCCAGCGTGCCTT---GGAACAGGTCAG 1518125 Query 7239 TACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATA 7298 | || ||| ||||| || |||| ||| ||||| || |||||||| | || | ||| | Sbjct 1518126 CATTCAATTCTTCAAATCGAGCACAGGTGATGGAGGTTTAGAAATCGATTCCCTTGTAGA 1518185 Query 7299 ACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 |||||||| ||||| | | || | | || || | || |||||||| | |||| Sbjct 1518186 GAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGGGTGCGCTTTGCCCCTTCAC 1518245 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 | || || || | || | | || | | ||| || || || ||||| | || | Sbjct 1518246 AGGCAGTACGCAGTCGCCTGACAGCTCTCTTGTTCTCGCTGATGTCCTTCTTGCGCTTTC 1518305 Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 | |||||||| || ||| || | | ||| ||| || ||||| |||||||||| Sbjct 1518306 GCTTAAACTCAGCAATGAAATGGTTGACCATTCTGTTATCAAAGTCTTCTCCACCCAAGT 1518365 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538 | || || | || || | |||||||||||| || || | ||||| ||| | || | Sbjct 1518366 GAGTGTCTCTAGCTGTTGATTTGACTTCAAAAATTCCATCCTCAATAGTTAGGATAGACA 1518425 Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCT 7598 ||| | | |||| || |||| |||||||| ||| | ||| | || | | |||| Sbjct 1518426 CATTAGAAATACCTCCTCCCAAGTCAAAAACGAGCAA-TTCCTTTCAGCTCCAACCTTCT 1518484 Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA-GTTC 7657 |||| || || || || ||||| || || ||||||||||| ||||| | ||| || || Sbjct 1518485 TATCTAGTCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTC-AAGGCACATTG 1518543 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 ||||||||||||||| | ||||||| || || ||| | || ||||| || |||||| | Sbjct 1518544 AGGCCAGCAATAGTTCCATCATCTTTTGTAGCCTGTTGCTGAGAATCATTGAAGTAGACT 1518603 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777 || || || || || || | ||| || || | | |||||| | || | || || ||| Sbjct 1518604 GGCACTGTGACCACAGCATTCGTAACAGTCATCCTGAGATAGGCCTCTGTGAGTTCCTTC 1518663 Query 7778 ATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || ||||| |||||||| || || | ||| || Sbjct 1518664 ATCTTGGTCAGAACCATAGAGGACACCTCCTC 1518695 >seq2611 Length=146480 Score = 221 bits (244), Expect = 2e-52 Identities = 373/540 (69%), Gaps = 0/540 (0%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || |||||||||||||| | |||||||||||||| || || || Sbjct 63203 GCACCATAAGCAACAGCTTCATCGGGGTTAATGCTCTTATTCAGTTCTTTTCCATTGAAG 63144 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | || | | | ||||| || ||||||| || || ||||| ||||| || || Sbjct 63143 AAGTCTTGCAGAAGCTTCTGAATCTTGGGGATTCTGGTGGAACCACCCACCAAGACAATG 63084 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | || || || | || | |||||||| | || || ||||| |||| | Sbjct 63083 TCATGGATCTGTGACTTGTCTAGTTTAGCATCTCGAAGGGCCTTCTCTACAGGGTCCAGA 63024 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 ||||||| ||| | || ||| || || || |||||||||||||| |||||| Sbjct 63023 GTGCCTCGGAACAGGTCAGCATTCAATTCTTCGAATCGAGCACGGGTAATGGAGGTATAG 62964 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 ||||||| || || || | |||||||| ||||| | | || | | || || | Sbjct 62963 AAATCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGG 62904 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| || ||||| || || || | ||| | | || | | ||| || Sbjct 62903 GTGCGCTTTGCCCGTTCACAGGCAGTACGCAGACGCCTGACAGCTCTCTTGTTCTCGCTG 62844 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||| || || || |||||||| || ||| || | | ||| ||| Sbjct 62843 ATGTCCTTCTTGTGCTTTCGCTTAAACTCAGCAATGAAATGGTTGACCATTCTGTTATCA 62784 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||| ||||||||||| || || || || || | |||||||||||| || || | Sbjct 62783 AAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTCAAAAATTCCATCC 62724 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | | | || |||||||| |||||||| |||| |||||||||||| || ||| Sbjct 62723 TCAATAGTGAGGATAGACACATCAAAAGTACCACCTCCCAAGTCAAAAATGAGCACATTC 62664 Score = 122 bits (134), Expect = 1e-22 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653 |||||||| || || || || ||||| || || ||||||||||| ||||| || || ||| Sbjct 62566 TTCTTATCTAGCCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTCGCAGGACA 62507 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 |||||||||||||||||| | |||||||| || || ||||| || ||||| || ||||| Sbjct 62506 -TTCAGGCCAGCAATAGTTCCAGCATCTTTTGTAGCCTGTCGCTGAGAATCATTGAAGTA 62448 Query 7714 GGCCGGGACCGTTACGACCGC 7734 ||| || || || || || || Sbjct 62447 GGCTGGCACTGTGACCACAGC 62427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634266224807680