Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2038 219 3e-51 seq2071 217 1e-50 seq43 159 3e-33 seq2611 129 5e-24 seq609 118 9e-21 seq323 118 9e-21 seq302 98.7 8e-15 seq1824 91.5 1e-12 >seq2038 Length=229302 Score = 219 bits (242), Expect = 3e-51 Identities = 404/588 (69%), Gaps = 6/588 (1%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | || ||||| || ||||| ||||| | || |||| || || || Sbjct 36289 GGTATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAG 36230 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||||||||| || |||||| |||| || ||| |||||| |||| || || || Sbjct 36229 ATAATTGCCAATGACCAGGGTAACCGAACCACGCCAAGCTATGTTGCTTTTACTGACACA 36170 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTA 550175 |||| ||| |||| ||||| || || |||| | || || || || ||||| || Sbjct 36169 GAACGATTAATTGGGGATGCCGCGAAGAATCAGGTTGCAATG--AACCCCACCAACACAG 36112 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 |||||||||| |||||| | || ||| | || ||| ||||| | ||||||| | |||| Sbjct 36111 TTTTTGATGCCAAACGTCTGATCGGACGTAGGTTTGATGATGCTGTTGTTCAGTCTGATA 36052 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTC 550295 ||||||| ||||| ||| | || || | | | || | || | | ||| Sbjct 36051 TGAAGCACTGGCCCTTCATGGTGGTGAACGATGCAGGCAGGCCCAAGGTCCAAGTAGAAT 35992 Query 550296 ATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAA 550355 | ||||| | ||| || | ||||| | | || ||||||||| | | || | Sbjct 35991 ACAAAGGAGAGGCAAAAAGTTTCTACCCAGAGGAGGTGTCCTCTATGGTTCTGACCAAGA 35932 Query 550356 TGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTA 550414 |||| ||| || || | | | || |||| ||||| |||| || | || || Sbjct 35931 TGAAGGAAATTGCAGAAGCCTATCTCGG-GAAGACTGTTACCAATGCTGTGGTCACAGTG 35873 Query 550415 CCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGA 550474 || || || || ||||| || || || || ||||| |||||||||||| ||||| ||| Sbjct 35872 CCGGCCTACTTCAATGATTCTCAGCGACAGGCTACAAAAGATGCTGGAACTATTGTTGGC 35813 Query 550475 CTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGAT 550534 || ||||| || || |||||||||||||| ||||||||||| |||| ||||| || ||| Sbjct 35812 CTCAATGTCCTGCGAATTATCAATGAACCAACTGCTGCTGCTATTGCTTATGGGCTAGAT 35753 Query 550535 AAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || | || ||| ||||| ||||| ||||| | |||||| Sbjct 35752 AAGAAGGTTGGAGCTGAAAGGAATGTGCTCATTTTTGACTTGGGAGGT 35705 Score = 105 bits (116), Expect = 5e-17 Identities = 203/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 ||||| |||||||| || ||||| | ||||| | ||| || | |||||| || ||| Sbjct 35428 GATGTCACTCCTCTTTCCCTTGGCATTGAAACTGCTGGTGGAGTCATGACTGTCCTCATC 35369 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 | | ||||| || || ||| || | | | || |||| ||||| || ||| Sbjct 35368 AAGCGCAATACCACCATCCCTACCAAGCAGACACAGACTTTCACTACCTATTCCGACAAT 35309 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 || ||| ||| ||||| | | |||||| ||||| | || || ||||| || Sbjct 35308 CAGCCTGGTGTGCTCATTCAGGTCTATGAAGGCGAAAGGGCCATGACCAAGGATAACAAC 35249 Query 552483 CAACTTGGTACTTTT-AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAAT 552541 | ||||| | ||| || ||| | || || ||||| || || ||||| || || || || Sbjct 35248 CTGCTTGGAAAGTTTGAACTTACA-GGCATCCCTCCAGCACCCCGTGGTGTTCCTCAGAT 35190 Query 552542 TGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 |||||| ||||| || || ||||||||||| || | ||||| ||||| ||||| Sbjct 35189 TGAAGTCACTTTTGACATTGATGCCAATGGCATCCTCAATGTCTCTGCTGTAGATAA 35133 >seq2071 Length=224109 Score = 217 bits (240), Expect = 1e-50 Identities = 405/589 (69%), Gaps = 7/589 (1%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | || ||||| || ||||| ||||| | || |||| ||||| || Sbjct 58417 GGTATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAAGTGGAG 58476 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||||||||| || |||||| |||| || ||| |||||| |||| || || || Sbjct 58477 ATAATTGCCAATGACCAGGGTAACCGAACCACGCCAAGCTATGTTGCTTTTACTGACACA 58536 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175 |||| ||| |||| ||||| || || |||| | || || || || ||||| || Sbjct 58537 GAACGATTAATTGGGGATGCCGCGAAGAATCAGGTTGCAATG--AACCCCACCAACACAG 58594 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 |||||||||| |||||| | || ||| | || ||| ||||| | ||||||| | |||| Sbjct 58595 TTTTTGATGCCAAACGTCTGATCGGACGTAGGTTTGATGATGCTGTTGTTCAGTCTGATA 58654 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTC 550295 ||||||| ||||| ||| | || || | | | || | || | | ||| Sbjct 58655 TGAAGCACTGGCCCTTCATGGTGGTGAACGATGCAGGCAGGCCCAAGGTCCAAGTAGAAT 58714 Query 550296 ATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATT-TCATCTATGGTTTTAATGAAA 550354 | ||||| | ||| || | ||||| | || || | ||||||| | | || Sbjct 58715 ACAAAGGAGAGGCAAAAAGTTTCTACCCAGAGGAGGTTGTCCTTTATGGTTCTGACCAAG 58774 Query 550355 ATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGT 550413 ||||| ||| || || | | | || |||| ||||| |||| || | || || Sbjct 58775 ATGAAGGAAATTGCAGAAGCCTATCTCGG-GAAGACTGTTACCAATGCTGTGGTCACAGT 58833 Query 550414 ACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473 || || || || ||||| || || || || ||||| |||||||||||| ||||||||| Sbjct 58834 GCCGGCCTACTTCAATGATTCTCAGCGACAGGCTACAAAAGATGCTGGAACTATTGCTGG 58893 Query 550474 ACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGA 550533 || ||||| || | |||||||||||||| ||||||||||| |||| ||||| || || Sbjct 58894 CCTGAATGTCCTGAGAATTATCAATGAACCAACTGCTGCTGCTATTGCTTATGGGCTAGA 58953 Query 550534 TAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||| | || ||| ||||| ||||| ||||| | |||||| Sbjct 58954 TAAGAAGGTTGGAGCTGAAAGGAATGTGCTCATTTTTGACTTGGGAGGT 59002 Score = 140 bits (154), Expect = 3e-27 Identities = 532/820 (65%), Gaps = 20/820 (2%) Strand=Plus/Plus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846 |||||| | || | ||||| ||||| |||||||| ||| |||| | ||| | || Sbjct 59066 TGGAGACACCCACTTGGGTGGAGAAGACTTTGATAACAGAATGGTCAACCAT--TTCATT 59123 Query 551847 GAAGATTTTAAACGAAAAAACAA--AGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC 551904 | || ||||| ||||| |||| || ||| | | | | | | |||| | | | Sbjct 59124 GCTGAGTTTAAGCGAAAGCACAAGAAGGACATC-AGCGAGAACAAG-AGAGCTGTCAGGC 59181 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964 |||| | ||||| || ||| | || || | | || || || | || || ||| || Sbjct 59182 GTCTGTGTACTGCCTGTGAACGGGCAAAGTGCACCCTCTCCTCCAGCACCCAGGCCAGTA 59241 Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 |||| | ||||| | | |||||||||||||| |||| | ||| | || || Sbjct 59242 TTGAGATTGATTCTCTCTATGAGGGAATTGATTTCTATACCTCCATTCCCCATGCTCGAT 59301 Query 552025 TTGAAGATATT---TGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT 552081 | ||||| ||| |||| || || || || || | || || ||||| | | Sbjct 59302 TCGAAGA-ATTGAATGTT--GACCTGTTCGGAGGCACTCTGGACCCTGTAGAGAAGGCCC 59358 Query 552082 TAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTA 552141 | ||||| | || | || || || | | ||||| ||||| | || |||| || | Sbjct 59359 TTCGAGATGCTAAACTAGACAAGTCACAGATCCATGACATTGTCTTGGTGGGTGATTCCA 59418 Query 552142 CAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAA 552199 | | ||| | || |||| | | | ||| ||| || |||||| ||| || | || Sbjct 59419 CCACAATCCTCAAGATTCAGAAGCTTCTGCAAGA-CTTCTT-CAATGGAAAAGAACTGAA 59476 Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259 | | || |||| | ||||| | |||||| |||||||| || | || || || ||||| Sbjct 59477 TAAGAGCATTAACTCCGATGAAGTTGTTGCTTATGGTGCAGCTGTCCAGGCGGCCATTCT 59536 Query 552260 TTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATC 552319 |||||| | | ||| || | || || | | || | ||||| |||||||| || Sbjct 59537 ATCTGGAGACAAGTCTGAGAATGTTCAGGATTTGTTGCTCTTGGATGTCACTCCTCTTTC 59596 Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTAT 552379 ||||| | ||||| | ||| || | |||||| || ||| | | ||||| || || Sbjct 59597 CCTTGGCATTGAAACTGCTGGTGGAGTCATGACTGTCCTCATCAAGCGCAATACCACCAT 59656 Query 552380 TCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAAT 552439 ||| || | | | || |||| ||||| || ||||| ||| ||| || Sbjct 59657 CCCTACCAAGCAGACACAGACTTTCACTACCTATTCCGACAATCAGCCTGGTGTGCTCAT 59716 Query 552440 TCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT-A 552498 ||| | | |||||| ||||| | || || ||||| || | ||||| | ||| | Sbjct 59717 TCAGGTCTATGAAGGCGAAAGGGCCATGACCAAGGATAACAACCTGCTTGGAAAGTTTGA 59776 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 | ||| | || || ||||| || || ||||| || || || ||||| || ||||| || | Sbjct 59777 ACTTACA-GGCATCCCTCCAGCACCCCGTGGTGTTCCTCAGATTGACGTCACTTTTGACA 59835 Query 552559 TCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 | ||||||||||| || | ||||| ||||| ||||| Sbjct 59836 TTGATGCCAATGGCATCCTCAATGTCTCTGCTGTAGATAA 59875 >seq43 Length=4087121 Score = 159 bits (176), Expect = 3e-33 Identities = 370/551 (67%), Gaps = 19/551 (3%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | || |||| || ||||| ||||| | || |||| || || || Sbjct 1519027 GGTATTGATCTTGGCACCATGTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAG 1518968 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||||||||| || |||||| |||| || | | |||||| |||| || || || Sbjct 1518967 ATAATTGCCAATGACCAGGGTAACCGAACCACGCTAAACTATGTTGCTTTTACTGACACA 1518908 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTA 550175 ||| ||| |||| ||||| | || |||| | || || || || ||||| || Sbjct 1518907 GAATGATTAATTGG-GATGCTTCGAAGAATCAGGTTGCAATG--AACCCCACCAACACAG 1518851 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 ||||| |||| ||| || | | |||| | | ||| ||||| | ||||||| | |||| Sbjct 1518850 TTTTTTATGCCAAATGTCTGACTGGACGTAAGTTTGATGATGCTGTTGTTCAGTCTGATA 1518791 Query 550236 ------TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 | |||| ||||| ||| | || |||| | | || | || | | ||| Sbjct 1518790 CTGTTGTTCAGCACTGGCCCTTCATGGTGGTGAATGATGCAGGGAGGCCCAAGGTCCAAG 1518731 Query 550290 CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | ||||| | ||| | || | ||||| | | || ||||||||| | | Sbjct 1518730 CAGAATACAAAGGAAAGGCAAAAAATTTGTACCCAGAGGAGGTGTCCTCTATGGTTCTGA 1518671 Query 550350 TGAAAATGAAACAA---ACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTA 550405 || ||||| || |||| || || | || | || |||||| |||| || Sbjct 1518670 CCAAGATGAAGGAACTCACAG--AGGCCTATCTCAGG--ATGACTGTTACGAATGCTGTG 1518615 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 | || || |||| || || ||||| || || | || ||||| ||||||| |||| | Sbjct 1518614 GTCACAGTGCCAGTCTACTTCAATGATTCTCAGCAACAGGCTACAAAAGATGATGGAACT 1518555 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 |||||||| || ||||| | | | |||||||||||||| ||||||||||| |||| ||| Sbjct 1518554 ATTGCTGGCCTCAATGTGCCTTGAATTATCAATGAACCAACTGCTGCTGCTATTGCTTAT 1518495 Query 550526 GGACTTGATAA 550536 ||||| ||||| Sbjct 1518494 GGACTAGATAA 1518484 >seq2611 Length=146480 Score = 129 bits (142), Expect = 5e-24 Identities = 116/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | || || ||||| || || ||||| || || || || ||||| Sbjct 62418 GTTACCAATGCTGTGGTCACAGTGCCAGCCTACTTCAATGATTCTCAGCGACAGGCTACA 62477 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||||||| || ||||| || || |||||||||||||| |||||| Sbjct 62478 AAAGATGCTGGAACTATTGCTGGCCTGAATGTCCTGCGAATTATCAATGAACCAACTGCT 62537 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 ||||| |||| ||||| || ||||| Sbjct 62538 GCTGCTATTGCTTATGGGCTAGATAA 62563 Score = 91.5 bits (100), Expect = 1e-12 Identities = 133/186 (72%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | || ||||| || ||||| ||||| | || |||| || || || Sbjct 61649 GGTATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAG 61708 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||||||||| || |||||| |||| || ||| |||||| |||| || || || Sbjct 61709 ATAATTGCCAATGACCAGGGTAACCGAACCACGCCAAGCTATGTTGCTTTTACTGACACA 61768 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175 |||| ||| |||| ||||| || || |||| | || || || || ||||| || Sbjct 61769 GAACGATTAATTGGGGATGCCGCGAAGAATCAGGTTGCAATG--AACCCCACCAACACAG 61826 Query 550176 TTTTTG 550181 |||||| Sbjct 61827 TTTTTG 61832 >seq609 Length=1049191 Score = 118 bits (130), Expect = 9e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || || || || || ||||| |||||||||||||| || |||||||| |||| Sbjct 132095 ATGCTGTGATCACAGTCCCTGCTTATTTCAATGACTCACAACGACAGGCTACTAAGGATG 132036 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| | || |||| || ||||| ||||| | || ||||||||||| |||||||| | Sbjct 132035 CTGGCCAGATATCTGGGCTAAATGTACTTCGAGTGATTAATGAACCTACAGCTGCTGCCC 131976 Query 550518 TTGCATATGGACTTGATAAA 550537 | || ||||| || || ||| Sbjct 131975 TGGCCTATGGTCTGGACAAA 131956 >seq323 Length=1674160 Score = 118 bits (130), Expect = 9e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || || || || || ||||| |||||||||||||| || |||||||| |||| Sbjct 474080 ATGCTGTGATCACAGTCCCTGCTTATTTCAATGACTCACAACGACAGGCTACTAAGGATG 474139 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| | || |||| || ||||| ||||| | || ||||||||||| |||||||| | Sbjct 474140 CTGGCCAGATATCTGGGCTAAATGTACTTCGAGTGATTAATGAACCTACAGCTGCTGCCC 474199 Query 550518 TTGCATATGGACTTGATAAA 550537 | || ||||| || || ||| Sbjct 474200 TGGCCTATGGTCTGGACAAA 474219 >seq302 Length=1732574 Score = 98.7 bits (108), Expect = 8e-15 Identities = 152/213 (71%), Gaps = 12/213 (6%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 |||||||||||||| ||| ||||| || ||||||||| ||| | ||||| Sbjct 218473 ACAAGATGAAGGGTGGACTCCTTTTGG--ATGTTGTAATCAA----AGTACAGCCATCTT 218420 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || || || ||||| ||||||||||||||||| ||||| | Sbjct 218419 CCAGTTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 218360 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGT 563441 | || || ||||| || || || || || | || || ||||| | | || Sbjct 218359 GGATCTTGGCCTTTACATTTTCTATAGTGTC--TGAGGGTTCAACTTCGATCATGATGGT 218302 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| || ||||| || || |||||||| ||||| Sbjct 218301 TTTCCCCGTAAGGGTCTTCACGAAAATCTGCAT 218269 >seq1824 Length=278459 Score = 91.5 bits (100), Expect = 1e-12 Identities = 148/211 (70%), Gaps = 8/211 (4%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 |||||||||||||| ||| ||||| || ||||| ||| ||| ||||| Sbjct 166978 ACAAGATGAAGGGTGGACTCCTTTTGG--ATGTTGTAGTCAA----AGTATGGCCATCTT 167031 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| | ||||| || || ||||||||||||||||| |||| | Sbjct 167032 CCAGTTGCTTACCAGCAAAGACCAGTCTCTGTTGGTCAGGAGGAATTCCTTCCTTATTCT 167091 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || || || |||| | | | ||||| || || |||| Sbjct 167092 GCATCTTGGCCTTTACATTTTCTATAGTGTCAGAGGGTTCAACCTCGAGCGTGACGGTTT 167151 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || ||||| || || |||||||| ||||| Sbjct 167152 TTCCTGTAAGGGTCTTCACGAAAATCTGCAT 167182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4023523549964480