Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1138 91.5 2e-13 >seq1138 Length=537340 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| || ||||| | |||||||| || ||||| | || || || |||||||||||||| Sbjct 330894 CATCACCCCCATCCTCTGATATTCCCCCACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTC 330953 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATT 36964 |||||| || |||||||| || ||||||||||| Sbjct 330954 TAGTGAAATGTTTTCCATGAAGTCAAATGGATT 330986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591508642958080