Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1138 114 2e-20 >seq1138 Length=537340 Score = 114 bits (126), Expect = 2e-20 Identities = 109/137 (80%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| | || ||||||||||| |||||||| ||||| ||| ||||| ||||| Sbjct 332878 GGAGAGCGCGTTGTGGCCTTTGCTGCCGTGGAGGGGATCTTCTTCTCTGGTTCTTTTGCA 332819 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 | || |||||||||||| || |||||| |||||||| || ||||||||| ||||| Sbjct 332818 TCAATATTCTGGCTCAAGAAG-CGGGGACTGATGCCCGGCCTCACCTTTTCCAATGAGCT 332760 Query 25992 CATCAGCAGGGACGAGG 26008 ||| ||||| ||||||| Sbjct 332759 CATTAGCAGAGACGAGG 332743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927577484154880