Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq56 86.0 8e-12 >seq56 Length=3632611 Score = 86.0 bits (94), Expect = 8e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 |||||| || || | |||||||||||| ||||||||| |||| || | |||||||| || Sbjct 2747486 ACCATAGGGCGACCTTGGATAGAAAGGGGTGGTCTCTTTCTGGGGTATTTCTTGCACTTT 2747545 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 ||||| |||||||| || || || || |||| Sbjct 2747546 TCCATACAGTTCACTAGTTGAGGCCTGGTAGA 2747577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664586399440640