Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2071 311 6e-79 seq2038 224 7e-53 seq43 178 1e-38 seq2611 116 3e-20 seq609 102 6e-16 seq169 96.9 3e-14 seq323 91.5 1e-12 seq1313 89.7 4e-12 >seq2071 Length=224109 Score = 311 bits (344), Expect = 6e-79 Identities = 966/1476 (65%), Gaps = 32/1476 (2%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||| | |||| ||||| || || ||||||||||| | ||||| ||||| ||||| Sbjct 59875 TTATCTACAGCAGAGACATTGAGGATGCCATTGGCATCAATGTCAAAAGTGACGTCAATC 59816 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| || || | | || || ||||| ||| | | ||| |||| || || Sbjct 59815 TGAGGAACACCACGGGGTGCTGGAGGGATGCCTGTAAGTTCAAACTTTCCAAGCAGGTTG 59756 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 ||||| || || | | ||| || || | | || || || ||| ||||| Sbjct 59755 TTATCCTTGGTCATGGCCCTTTCGCCTTCATAGACCTGAATGAGCACACCAGGCTGATTG 59696 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAAT 281655 || ||||| || || || | |||| | | || ||| || || || || | | || Sbjct 59695 TCGGAATAGGTAGTGAA-AGTCTGTGTCTGCTTGGTAGGGATGGTGGTATTGCGCTTGAT 59637 Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 281715 | ||||| | |||||||| ||||| | ||||| ||||||||||||||||| | Sbjct 59636 GAGGACAGTCATGACTCCACCAGCAGTTTCAATGCCAAGGGAAAGAGGAGTGACATCCAA 59577 Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 281775 || | | || |||| || ||| | | ||| ||||| || || || | ||| Sbjct 59576 GAGCAACAAATCCTGAACATTCTCAGACTTGTCTCCAGATAGAATGGCCGCCTGGACAGC 59517 Query 281776 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 281835 |||||||| |||||| ||||||| | |||| | | ||| |||| ||| |||||||| Sbjct 59516 TGCACCATAAGCAACAACTTCATCGGAGTTAATGCTCTTATTCAGTTCTTTTCCATTGAA 59457 Query 281836 AAAATTTGAAAGAAGTTGTCTTAC-CTT-AGGAATACGAGATGATCCTCCAACTAATACA 281893 || | | ||||| | ||| | ||| |||| | | | || | || || || ||| Sbjct 59456 GAAGTCTTGCAGAAGCT-TCTGAATCTTGAGGATTGTG-GTGGAATCACCCACCAAGACA 59399 Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 281953 || ||||| | |||||| || || ||||| | ||| | | || || || || || Sbjct 59398 ATGTCATGGATCTGTGACTTGTCTAGTTTAGCATCTCGAAGGGCCTTCTCTACAGGGTCC 59339 Query 281954 AGACCAGCTCTAAACAAGTCTGAACAA--AGTTCTTCGAATTTAGCTCTAGTAAGAGTGA 282011 ||| ||| |||| ||| |||| | |||||||||| ||| | || | | Sbjct 59338 AGAGTGCCTCCGAACAGGTC--AACATTCAATTCTTCGAATCGAGCATGGGGAATGGAGG 59281 Query 282012 CATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTC--GAAGA 282069 || |||||||||| || | | |||||||| ||||| | | || || | || Sbjct 59280 TATAGAAATCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGG 59221 Query 282070 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TG 282125 ||| |||||| || || |||||||| || || | || | | | ||| | | Sbjct 59220 AGAGGGTGCACTTT--GCCCGTTCACAGGCAGTACACAGACGCCTGACAGCTCTCTTGTT 59163 Query 282126 CTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--AC 282183 || |||| || | || | |||| ||| || || ||| | ||| | || Sbjct 59162 CTCGCTGATG----TCCTTCTTGTGCTTTCGCTTAAACTCAGCAATGAA--ATGGTTGAC 59109 Query 282184 AAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTG 282243 | | |||||||| ||||| || ||||| | || | ||| | || | | | |||| Sbjct 59108 CATTCTGTTATCAAAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTC 59049 Query 282244 GAAAAGT-CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAA 282302 |||| | ||||| |||| || || | || |||||| || ||||| |||| |||| Sbjct 59048 AAAAAATTCCATCCTCAATAGTGAAGATAGACACATCAAAAGTACCACCTCCCAAGTCAA 58989 Query 282303 AAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAG 282362 |||| || |||||| |||| | || ||||| || ||||| |||| |||||||| Sbjct 58988 AAATGAGCACATTCCTTTCAGCTCCAACCTTCTTATCTAGCCCATAAGCAATAGCAGCAG 58929 Query 282363 CAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAG 282422 ||||||||||||| |||||||||| ||||| || |||||||| |||| |||||||| | Sbjct 58928 CAGTTGGTTCATTGATAATTCTCAGGACATTCAGGCCAGCAATAGTTCCAGCATCTTTTG 58869 Query 282423 TGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTT 282482 | || |||| || ||||| || || || || || || || | || |||| || || Sbjct 58868 TAGCCTGTCGCTGAGAATCATTGAAGTAGGCCGGCACTGTGACCACAGCATTGGTAACAG 58809 Query 282483 CTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGA-AATT 282541 || || | ||| || ||| ||| ||||| || | | || ||| | || || Sbjct 58808 TCTTCCCGAGATAGGCTTCTGCAATTTCCTTCATCTTGGTCAGAACCATAAAGGACAACC 58749 Query 282542 TGTTCTGG--AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTAT 282599 | ||||| |||| || || | || || ||| ||||| | | || | Sbjct 58748 TCCTCTGGGTAGAAACTT--TTTGCCTCTCCTTTGTATTCTACTTGGACCTTGGGCCTGC 58691 Query 282600 TACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCAT 282659 || | || | || | || ||||| | |||||||| || |||||| |||| Sbjct 58690 CTGCATCGTTCACCACCATGAAGGGCCAGTGCTTCATATCAGACTGAACAACAGCATCAT 58631 Query 282660 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAG 282719 ||| | || || | ||||| |||||||||| || ||||| || || | |||| Sbjct 58630 CAAACCTACGTCCGATCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAA 58571 Query 282720 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 282779 | |||| || || ||||| ||||| | ||||||| || ||||| | |||||| || Sbjct 58570 CCTGATTCTTCGCGGCATCCCCAATTAATCGTTCTGTGTCAGTAAAAGCAACATAGCTTG 58511 Query 282780 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACAC 282839 | || || || ||||| || ||||| ||||| || || ||||| |||| || | |||| Sbjct 58510 GCGTGGTTCGGTTACCCTGGTCATTGGCAATTATCTCCACTTTTCCATGCTGGAAGACAC 58451 Query 282840 CTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 282875 | ||||| | || || || | ||||||||||| Sbjct 58450 CCACACAGGAGTAGGTGGTGCCAAGATCAATACCAA 58415 >seq2038 Length=229302 Score = 224 bits (248), Expect = 7e-53 Identities = 464/687 (68%), Gaps = 5/687 (1%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 |||||||| ||||| || ||||| | || | ||| | || | | | |||| |||| | Sbjct 35608 TTATCAAAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTC-AAAATT 35666 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 ||||| |||| || | | || |||||| || ||||| |||| |||||||| || Sbjct 35667 CCATCCTCAATAGTGAGGATAGACACATCAAAAGTACCACCTCCCAAGTCAAAAATGAGC 35726 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 |||||| |||| | || ||||| || ||||| |||| |||||||||||||||| Sbjct 35727 ACATTCCTTTCAGCTCCAACCTTCTTATCTAGCCCATAAGCAATAGCAGCAGCAGTTGGT 35786 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 ||||| ||||||| || ||||| || ||| |||| |||| |||||||| || || ||| Sbjct 35787 TCATTGATAATTCGCAGGACATTGAGGCCAACAATAGTTCCAGCATCTTTTGTAGCCTGT 35846 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490 | || ||||| || || || || || || || | || |||| || || || || Sbjct 35847 CGCTGAGAATCATTGAAGTAGGCCGGCACTGTGACCACAGCATTGGTAACAGTCTTCCCG 35906 Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG- 282549 | ||| || ||| ||| ||||| || | | || ||| || || | | ||||| Sbjct 35907 AGATAGGCTTCTGCAATTTCCTTCATCTTGGTCAGAACCATAGAGGACACCTCCTCTGGG 35966 Query 282550 -AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACAT 282608 |||| || || | || || ||| ||||| | | || | || | | Sbjct 35967 TAGAAACTT--TTTGCCTCTCCTTTGTATTCTACTTGGACCTTGGGCCTGCCTGCATCGT 36024 Query 282609 TAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTC 282668 | | || | || ||||| | |||||||| || |||||| |||| ||| | Sbjct 36025 TCACCACCATGAAGGGCCAGTGCTTCATATCAGACTGAACAACAGCATCATCAAACCTAC 36084 Query 282669 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATT 282728 || || | ||||| |||||||||| || ||||| || || | |||| | |||| | Sbjct 36085 GTCCGATCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCT 36144 Query 282729 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 282788 | || ||||| ||||| | ||||||| || ||||| | |||||| ||| || || | Sbjct 36145 TCGCGGCATCCCCAATTAATCGTTCTGTGTCAGTAAAAGCAACATAGCTTGGCGTGGTTC 36204 Query 282789 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 282848 | ||||| || ||||| ||||| || || || || |||| || | ||||| ||||| Sbjct 36205 GGTTACCCTGGTCATTGGCAATTATCTCCACCTTTCCATGCTGGAAGACACCCACACAGG 36264 Query 282849 TAAAAGTTGTTCCTAAATCAATACCAA 282875 | || || || | ||||||||||| Sbjct 36265 AGTAGGTGGTGCCAAGATCAATACCAA 36291 >seq43 Length=4087121 Score = 178 bits (196), Expect = 1e-38 Identities = 785/1223 (64%), Gaps = 36/1223 (3%) Strand=Plus/Plus Query 281673 CACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAA 281732 ||||||| ||||| | |||||| ||||||||||||||||| | || | | || |||| Sbjct 1517823 CACCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAAGAGCAACAAATCCTGAA 1517882 Query 281733 GTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAG 281792 || ||| | | |||| ||||| || | || | ||| |||||||| |||||| Sbjct 1517883 CATTCTCAGATTTGTCACCAGATAGAATGGCCTCCTGGACAGCTGCACCATAAACAACAG 1517942 Query 281793 CTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTT 281852 |||||||||| |||| | | ||| | || ||| |||| ||| || | |||||| | Sbjct 1517943 CTTCATCAGGGTTAATGCTCTTATTCACTTCTTTTCCATGGAAGAAGCCTTGAAGAAGCT 1518002 Query 281853 GTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT 281911 ||| | ||| || || | || || || || ||||| ||||| ||||| | |||||| Sbjct 1518003 -TCTGAATCTTGGGGATGCTGGAAGAGCCACCCACTAAGACAATGTCATGGATCTGTGAC 1518061 Query 281912 TTATCCAGTTTTGAATC-CAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAA 281970 || || ||||| | ||| | | | ||||| |||| || || || |||| Sbjct 1518062 TTGTCTAGTTTAGCATCTCGAGGGGTC-TTTTCTGCGGGGTCCAGCGTGCCTTGGAACAG 1518120 Query 281971 GTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTC 282030 ||| | | | |||||| ||| ||| | || | | | | |||| ||||| | Sbjct 1518121 GTCAGCATTCAATTCTTCAAATCGAGCACAGGTGATGGAGGTTTAGAAATCGATTCCCTT 1518180 Query 282031 GAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACG 282090 | | | |||||||| ||||| | | || || || || || | || || || | Sbjct 1518181 GTAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGGGTGCGCTTTGCCCC 1518240 Query 282091 TTCACATGCTGTCCTTAGTCTTC-GTAAG---GCTTTTGCTGATTGATTCAAATCTGTTT 282146 |||||| || || | |||| | | || ||| | || |||| || | | Sbjct 1518241 TTCACAGGCAGTACGCAGTCGCCTGACAGCTCTCTTGTTCTCGCTGAT----GTCCTTCT 1518296 Query 282147 TATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTC 282204 | |||| ||| || || ||| | ||| | || | | |||||||| ||||| Sbjct 1518297 TGCGCTTTCGCTTAAACTCAGCAATGAA--ATGGTTGACCATTCTGTTATCAAAGTCTTC 1518354 Query 282205 ACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGA 282264 || ||||| | ||| | || | || | | | |||| |||| |||||| |||| || Sbjct 1518355 TCCACCCAAGTGAGTGTCTCTAGCTGTTGATTTGACTTCAAAAATTCCATCCTCAATAGT 1518414 Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 | | || |||| | | || || |||| ||||||| || | |||| |||| Sbjct 1518415 TAGGATAGACACATTAGAAATACCTCCTCCCAAGTCAAAAACGAGCA-ATTCCTTTCAGC 1518473 Query 282325 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 | || ||||| || ||||| |||| ||||||||||||||||||||| ||||||| Sbjct 1518474 TCCAACCTTCTTATCTAGTCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTCA 1518533 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 ||||| || |||||||| |||| ||||||| || || ||| || ||||| || Sbjct 1518534 AGGCACATTGAGGCCAGCAATAGTTCCATCATCTTTTGTAGCCTGTTGCTGAGAATCATT 1518593 Query 282445 AAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGC 282504 || || | || || || | || |||| || || | | | ||| || || | Sbjct 1518594 GAAGTAGACTGGCACTGTGACCACAGCATTCGTAACAGTCATCCTGAGATAGGC-CT--C 1518650 Query 282505 TGT---TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA-ATATTGCT 282560 ||| || ||||| || | | || ||| || || | | ||||| | | ||| | Sbjct 1518651 TGTGAGTTCCTTCATCTTGGTCAGAACCATAGAGGACACCTCCTCTGGGTACAAATTTTT 1518710 Query 282561 TGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAA 282620 || || |||| ||| | ||| | | || | || |||| | || | | Sbjct 1518711 TGCCTTTCCTTTG-TATTCTGCTTGGACCTTGGGCCTCCCTGCATCATTCACCACCATGA 1518769 Query 282621 ATGGCCAATATTTCA------TATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAA 282674 | ||||| | | | |||| || |||||| |||| ||| | | ||| Sbjct 1518770 AGGGCCAGTGCTGAACAACAGTATCAGACTGAACAACAGCATCATCAAACTTACGTCCAG 1518829 Query 282675 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTG 282734 | | | ||| |||| ||||| || ||||| || || | |||| | |||| || | | Sbjct 1518830 TCAGACATTTGGCATAAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTCGAAG 1518889 Query 282735 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 282794 |||| ||||| | |||||| || ||||| | |||||| | | || || || |||| Sbjct 1518890 CATC-CCAATTAATCATTCTGTGTCAGTAAAAGCAACATAGTTTAGCGTGGTTCGGTTAC 1518948 Query 282795 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA--ACTAAA 282852 | || ||||| ||||| || || || || |||| || | ||||| ||||| | || | Sbjct 1518949 CCTGGTCATTGGCAATTATCTCCACCTTTCCATGCTGGAAGACACCCACACAGGAGTACA 1519008 Query 282853 AGTTGTTCCTAAATCAATACCAA 282875 | || || | ||||||||||| Sbjct 1519009 --TGGTGCCAAGATCAATACCAA 1519029 >seq2611 Length=146480 Score = 116 bits (128), Expect = 3e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || ||||| || ||||| |||| ||||||||||||||||||||| ||||||| || ||| Sbjct 62566 TTCTTATCTAGCCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTCGCAGGACA 62507 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || |||||||| |||| |||||||| || || |||| || ||||| || || || Sbjct 62506 TTCAGGCCAGCAATAGTTCCAGCATCTTTTGTAGCCTGTCGCTGAGAATCATTGAAGTAG 62447 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || || || | || |||| Sbjct 62446 GCTGGCACTGTGACCACAGCAT 62425 Score = 111 bits (122), Expect = 1e-18 Identities = 360/552 (65%), Gaps = 14/552 (3%) Strand=Plus/Minus Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 |||||||| |||||||||||||| || |||| | | ||| |||| ||| |||||||| Sbjct 63203 GCACCATAAGCAACAGCTTCATCGGGGTTAATGCTCTTATTCAGTTCTTTTCCATTGAAG 63144 Query 281837 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895 || | | ||||| | ||| | ||| || || | | || || || || || ||||| Sbjct 63143 AAGTCTTGCAGAAGCT-TCTGAATCTTGGGGATTCTGGTGGAACCACCCACCAAGACAAT 63085 Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955 ||||| | |||||| || || ||||| | ||| | | || || || || || || Sbjct 63084 GTCATGGATCTGTGACTTGTCTAGTTTAGCATCTCGAAGGGCCTTCTCTACAGGGTCCAG 63025 Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 282015 | ||| |||| ||| | | | |||||||||| ||| | |||| | | || Sbjct 63024 AGTGCCTCGGAACAGGTCAGCATTCAATTCTTCGAATCGAGCACGGGTAATGGAGGTATA 62965 Query 282016 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 |||||||||| || | | |||||||| ||||| | | || || || || || Sbjct 62964 GAAATCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAG 62905 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTC-GTAAG---GCTTTTGCTGATT 282131 | || || || |||||||| || || | || | | | || ||| | || | Sbjct 62904 GGTGCGCTTTGCCCGTTCACAGGCAGTACGCAGACGCCTGACAGCTCTCTTGTTCTCGCT 62845 Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 282189 ||| || | || | |||| ||| || || ||| | ||| | || | | Sbjct 62844 GAT----GTCCTTCTTGTGCTTTCGCTTAAACTCAGCAATGAA--ATGGTTGACCATTCT 62791 Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 |||||||| ||||| || ||||| | || | ||| | || | | | |||| |||| Sbjct 62790 GTTATCAAAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTCAAAAAT 62731 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 |||||| |||| || | | || |||||| || ||||| |||| |||||||| || Sbjct 62730 TCCATCCTCAATAGTGAGGATAGACACATCAAAAGTACCACCTCCCAAGTCAAAAATGAG 62671 Query 282310 TACATTCATTTC 282321 |||||| |||| Sbjct 62670 CACATTCCTTTC 62659 Score = 96.9 bits (106), Expect = 3e-14 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||||| || ||||| || || | |||| | |||| || || ||||| ||||| | Sbjct 61832 CAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTCGCGGCATCCCCAATTAATC 61773 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 ||||||| || ||||| | |||||| ||| || || || ||||| || ||||| |||| Sbjct 61772 GTTCTGTGTCAGTAAAAGCAACATAGCTTGGCGTGGTTCGGTTACCCTGGTCATTGGCAA 61713 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 | || || || || |||| || | ||||| ||||| | || || || | ||||| Sbjct 61712 TTATCTCCACCTTTCCATGCTGGAAGACACCCACACAGGAGTAGGTGGTGCCAAGATCAA 61653 Query 282870 TACCAA 282875 |||||| Sbjct 61652 TACCAA 61647 >seq609 Length=1049191 Score = 102 bits (112), Expect = 6e-16 Identities = 150/211 (71%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330 || || |||| |||||||||||| | |||| | | | || | |||| || |||| Sbjct 131898 AGAAATATCAAAGGTTCCACCACCTAAATCATACACAG---CAATGATTT--TTATCTTC 131952 Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 ||| || |||||||| || | |||||||| || ||||||||||| | || | || Sbjct 131953 AGATTTGTCCAGACCATAGGCCAGGGCAGCAGCTGTAGGTTCATTAATCACTCGAAGTAC 132012 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 ||| || |||| || || ||||| ||||| || |||| |||||| || || ||||| Sbjct 132013 ATTTAGCCCAGATATCTGGCCAGCATCCTTAGTAGCCTGTCGTTGTGAGTCATTGAAATA 132072 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTTACT 282481 ||||| || || || || |||| | || || Sbjct 132073 AGCAGGGACTGTGATCACAGCATTTTTTGCT 132103 >seq169 Length=2346696 Score = 96.9 bits (106), Expect = 3e-14 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235 ||| ||||| || ||||| ||||| ||||| ||||||||| | || || | ||||| Sbjct 838488 TGTTGTAGCTACTATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAAAGTTAT 838429 Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295 |||||| || ||||| ||| | || ||| ||||| || ||||| |||||||| || || Sbjct 838428 TCATTATGGCGCTCCTAAGGAAATGGAATCCTATTACCAGGAAATCGGTAGAGCTGGCCG 838369 Query 131296 TGATGG 131301 |||||| Sbjct 838368 TGATGG 838363 >seq323 Length=1674160 Score = 91.5 bits (100), Expect = 1e-12 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 ||| || |||||||| || | |||||||| || ||||||||||| | || | ||||| Sbjct 474219 TTTGTCCAGACCATAGGCCAGGGCAGCAGCTGTAGGTTCATTAATCACTCGAAGTACATT 474160 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 || |||| || || ||||| ||||| || |||| |||||| || || ||||| || Sbjct 474159 TAGCCCAGATATCTGGCCAGCATCCTTAGTAGCCTGTCGTTGTGAGTCATTGAAATAAGC 474100 Query 282454 AGGAACAGTAATAACGGCATCTGTTACT 282481 ||| || || || || |||| | || || Sbjct 474099 AGGGACTGTGATCACAGCATTTTTTGCT 474072 >seq1313 Length=439396 Score = 89.7 bits (98), Expect = 4e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 400295 AATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTA 400354 ||||||| || || | || |||||||| ||||| |||||| | || | || || ||| Sbjct 263461 AATGTACACTTATCCTAACTGAGGGAGACTCAGCCAAAACACTGGCAGTTTCAGGTCTTG 263402 Query 400355 ATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTA 400414 |||| ||||||||||| | ||||| || || || |||||||||||| | | ||||| Sbjct 263401 GTGTTGTTGGAAGAGATAAATATGGGGTATTTCCTCTTAGAGGAAAAATACTCAATGTGC 263342 Query 400415 GGGATGCTAGTCCTAAA 400431 | || ||| || |||| Sbjct 263341 GAGAAGCTTCTCATAAA 263325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3735271498076352