Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq55 102 1e-16 >seq55 Length=3648298 Score = 102 bits (112), Expect = 1e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 214080 TACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCA 214139 |||| || || |||| | ||| | ||||| || ||||| ||| | ||| |||| || | Sbjct 3163387 TACGGTTTGCTGTGGGGCAGGAGGTCTTTGGGCTGGTGCCTGGTCTGATGATGTATGCTA 3163446 Query 214140 TTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAAT 214199 |||||||| | ||||||||||| || || || ||||| ||||| ||||| || || | Sbjct 3163447 CCATCTGGCTTCGGGAGCACAACAGAGTGTGTGATGTGCTTAAACAGGAGCATCCTGAGT 3163506 Query 214200 GGAACGACGAACAGCTGTTCCAGA 214223 || |||| || ||||| ||||||| Sbjct 3163507 GGGACGATGAGCAGCTATTCCAGA 3163530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722353873812480