Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1138 84.2 3e-11 >seq1138 Length=537340 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 ||||||| | | ||||| ||||| || ||| || || ||||| || |||||||||| Sbjct 332743 CCTCGTCTCTGCTAATGAGCTCATTGGAAAAGGTGAGGCCGGGCATCAGTCCCCGCTTCT 332802 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 | | |||||| || | ||| || ||||||||||||||||||||||| Sbjct 332803 TGAGCCAGAATATTGATGCAAAAGAACCAGAGAAGAAGATCCCCTCCAC 332851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617591407013120