Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cricetulus_20griseus_20[refseq_20GCF_5F000223135.1_202011-08-23] 109,152 sequences; 2,399,786,748 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1179 91.5 2e-13 >seq1179 Length=509559 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | || || || ||||||| || ||||| || || ||||||||||| |||||||| Sbjct 473735 TGGTATGCCATCATCGAGTCTCAGACAGAGACGGGCACCCCATACATGCTCTACAAAGAT 473794 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 ||||||| | ||||| || || |||| ||||| ||||| | ||| || ||| Sbjct 473795 TCCTGTAATCGGAAGAGCAACCAGCAGAACTTGGGAACTATCAAATGCAGCAACCTGTGT 473854 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 |||||||| | || | ||| |||||||||| Sbjct 473855 ACAGAAATAGTAGAGTATACTAGCAAAGATGAG 473887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582464998964480