Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= AC_000002.1 Length=34446 Score E Sequences producing significant alignments: (Bits) Value seq4931 482 5e-132 >seq4931 Length=27746 Score = 482 bits (534), Expect = 5e-132 Identities = 1449/2210 (66%), Gaps = 79/2210 (4%) Strand=Plus/Plus Query 18629 CTCAGCACGCAGCTCCCAACAGGCCGAACTTTATCGGCTTTCGGGACTGCTTTGTAGGCT 18688 ||||||| || || |||||||| || | ||| || ||| |||| |||| | || | Sbjct 16131 CTCAGCAAAGCGCGCCAAACAGGCCAAATTATATAGGTTTTAGGGATAACTTTATCGGGT 16190 Query 18689 TGATGTATTATAACAGCGGGGGCAACCTGGGCGTCTTAGCGGGTCAATCCTCTCAGCTGA 18748 | |||| ||||||||| |||| |||| || ||||| |||||||| || ||||| | Sbjct 16191 TAATGTTTTATAACAGTAATAGCAATTTGGGTGTATTAGCCGGTCAATCGTCACAGCTTA 16250 Query 18749 ATGCCGTGGTAGACCTGCAAGACCGCAACACTGAGCTTTCCTATCAGATGCTTCTTGCAA 18808 |||| || | ||||| |||||| | || || || | || |||||| | | | | | Sbjct 16251 ATGCTGTCATCGACCTTCAAGACAGAAATACAGAATTGTCATATCAGCTTATGTTAGATA 16310 Query 18809 AC--ACGACGGACAGATCCCGCTATTTTAGCATGTGGAACCAAGCCATGGACTCGTACGA 18866 | || ||| | ||| | || |||| ||| ||||||| |||||| |||| || || || Sbjct 16311 ATTTAC-ACG-ATAGAACTCGATATTACAGCTTGTGGAATCAAGCCGTGGATTCATATGA 16368 Query 18867 CCCGGAGGTCAGGGTGATAGATAACGTGGGCGTAGAGGACGAGATGCCTAATTACTGCTT 18926 || |||||| | | ||||| || | || ||||| ||||| | || ||||| ||||| Sbjct 16369 TCCAGAGGTCCGAATCATAGACAATATTGGAGTAGAAGACGAACTTCCAAATTATTGCTT 16428 Query 18927 TCCGTTGTCGGGG-GTTCAGAT-TGGAAACCGTAGCCACGAGGTTCAAAGAAACCAACAA 18984 |||||| || || |||| | | || || | | ||| | ||| |||| Sbjct 16429 TCCGTTATCTGGATGTTCTCCTATTGAT----TATACT-GCTGTTAATCAAAATGGACAA 16483 Query 18985 -CAGTGGCAAAATGTAGCTAATAGTGACAACAATTACATAGGCAAGGGGAACCTACCGGC 19043 || | ||| | | ||| || | | |||||||| || || | Sbjct 16484 GCAAT--CAATAACAA--TAACCCTGCGCAGGTTCTTATAGGCAAAGGAAATGTTGAATG 16539 Query 19044 CATGGAGATAAATCTAGCGGCCAATCTCTGGCGTTCCTTTTTGTACAGTAATGTGGCGTT 19103 |||||| || || |||||||||| || ||| ||| |||| |||| | ||| | Sbjct 16540 CATGGAAATCAACATAGCGGCCAACCTGTGGAAGAATTTTCTGTATTCTAATATCGCGCT 16599 Query 19104 GTACTTGCCAGACAACCTTAAATTCAC-CCCTCACAACATTCAACTCCCGCCTAACACGA 19162 ||| |||| || ||| ||||| ||| ||| || || | | | |||| | || Sbjct 16600 GTATCTGCCCGATAACTTTAAAACCACTCCCGCA-AATGTGGTATTGCCGC-----AGGA 16653 Query 19163 ACACC-----TACGAGTACATGAACGGGCGAATCCCCGTTAGCGGCCTTATTGATACGTA 19217 || | || | |||||||| || || || | | || || | || || Sbjct 16654 TCAGCGGCTATATGCTTACATGAATTCTCGCATTCCAGCCGGGGGTCTGGTAGAGGATTA 16713 Query 19218 CGTAAATATAGGCACGCGGTGGTCGCCCGATGTGATGGACAACGTGAATCCCTTTAACCA 19277 | || ||||| || ||||||| ||||||||||||| || ||||| ||||| || Sbjct 16714 TATCAACATAGGAACCAGGTGGTCAATAGATGTGATGGACACGGTTAATCCATTTAATCA 16773 Query 19278 CCACCGCAACTCGGGCCTGCGTTACCGCTCCCAGCTGCTGGGCAACGGCCGCTTCTGC-G 19336 ||| | || | || || | ||| | || ||||| | || || || ||| | ||| Sbjct 16774 TCACAGAAATACTGGTTTGAGGTACAGGTCTCAGCTATTAGGAAATGGTCGC-TATGCTT 16832 Query 19337 ACTTTCACATTCAGGTGCCACAAAAGTTTTTTGCTATTCGAAACCTGCTTCTCCTGCCCG 19396 |||||| |||||||| || |||||||||||||| || || ||||||| || || | Sbjct 16833 CCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTCTGCTACCGG 16892 Query 19397 GCACGTACACTTACGAGTGGTCCTTTAGAAAGGACGTAAACATGATCCTTCAGAGCACTC 19456 | |||||| |||||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct 16893 GATCGTACAGTTACGAATGGTCTTTTAGAAAAGATGTAAACATGATTTTGCAGAGTACTC 16952 Query 19457 TGGGCAATGATCTGCGGGTCGATGGGGCCACTGTTAATATTACCAGCGTCAACCTCTACG 19516 | |||||||||||| ||| || || || | || | || |||| | | ||| | | Sbjct 16953 TTGGCAATGATCTGAGGGAGGACGGAGCGTCAGTAACATTTGACAGCATTAGCCTATTTG 17012 Query 19517 CCAGCTTCTTTCCCATGTCACATAACACCGCTTCCACTTTGGAAGCTATGCTCCGCAACG 19576 | | |||||||| ||||| |||||||| ||||| ||| ||||| ||||||| ||||| | Sbjct 17013 CTACTTTCTTTCCGATGTCTCATAACACTGCTTCTACTCTGGAAACTATGCTTCGCAATG 17072 Query 19577 ACACTAATGACCAGTCTTTTAATGACTATCTCTCGGCGGCTAACATGTTGTATCCCATTC 19636 | ||| || ||||| || |||||||| || | ||||||| | ||| | |||| Sbjct 17073 AGGTTAACGATCAGTCCTTCGGCGACTATCTTTCCAGCGTTAACATGCTTTATGCTATTC 17132 Query 19637 CGCCCAATGCCACCCAAC--TGCCCATC------CCCTCACGCAACTGGGCAGCGTTCCG 19688 | || || || |||| |||| ||| || || | || ||||| || || | Sbjct 17133 CTCCGCAT--CAAACAACAGTGCCTATCTCTATTCCAGCAAGGAATTGGGCGGCCTTTAG 17190 Query 19689 TGGCTGGAGTCTCACCCGGCTAAAACAGAGGGAGACACCGGCGCTGGGGTCCCCGTTCGA 19748 || ||| | || | |||||||| ||| ||||| | | || || | || || Sbjct 17191 AGGTTGGGCATTTACTAGACTAAAACAACAGGAAACACCAACCATTGGCTCTGCATTTGA 17250 Query 19749 TCCCTATTTCACCTATTCGGGCACCATCCCGTACCTGGACGGCACTTTTTACCTCAGCCA 19808 || || || | || |||||| | |||||||| ||| | || ||||| | || Sbjct 17251 CCCATACTTTAGGTACTCGGGCTCAATCCCGTATTGGGATGCGACCTTTTATTTATCTCA 17310 Query 19809 CACCTTTCGCAAGGTGGCCATCCAGTTTGACTCTTCTGTGACCTGGCCCGGCAATGACAG 19868 ||| | | ||||||||||| |||||||| ||||| || | ||||| || |||||||| Sbjct 17311 CACTATCAGAAAGGTGGCCATACAGTTTGATTCTTCAGTAAGTTGGCCTGGAAATGACAG 17370 Query 19869 GCTTTTAACCCCTAACGAGTTCGAAATAAAAATAAGTGTGGACGGTGAAGGCTACAACGT 19928 ||||||| ||||| || || | ||||||| | ||||||| |||||||| ||| Sbjct 17371 ACTTTTAATACCTAATGAATTTCACATAAAAAGAGAGGTGGACGCGGAAGGCTATAACAC 17430 Query 19929 GGCTCAGAGCAATATGACTAAGGACTGGTTCCTGGTGCAGATGCTAGCGAATTACAACAT 19988 ||||||||| || |||||||| |||| || | || ||||| || | ||||| || Sbjct 17431 CTCTCAGAGCATAATTACTAAGGATTGGTATATGATTCAAATGCTCGCTCACTACAATAT 17490 Query 19989 AGGCTACCAGGGATATCACCTGCCCCCGGACTACAAGGACAGGACATTTTCCTTCCTGCA 20048 || ||||| || | |||||| ||| | || || || || || | |||||| | Sbjct 17491 CGGATACCAAGGTTTTCACCTACCCACAGATTATAAAGATAGATTGTATTCCTTTTTAAG 17550 Query 20049 TAACTTCATACCCATGTGCCGACAGGTTCCCAACCCAGCAACCGAGGGCTACTTTGGAC- 20107 || || ||||||||| |||| ||| | || | | || | | | || Sbjct 17551 AAATTTTGAACCCATGTGTAGACAAGTTGTGGATCCTGGTAAGACGGAAAAATATCAACC 17610 Query 20108 ---TAGGCATAGTGAACCATAGAACAACTCCGGCTTATTGGTTTCGATTCT-GCCGCGCT 20163 | | || | | | || || || || | || | ||| | | | | | Sbjct 17611 CGTTGCTCTTAAATATCAGCATAATAATTCAGG--TTTTAAAAACCATTATGGACCCTTT 17668 Query 20164 CCGCGCGAGGGCCACCCCTACCCC--CAACTGGCCTTACCCCCTCATTGGGACCCACGCC 20221 ||| | ||||| || || ||| |||||||||| ||| ||||| || || || Sbjct 17669 GGGCGACAAGGCCATCCTTATCCCTGTAACTGGCCTTTCCCGCTCATCGGAGAACAGGCA 17728 Query 20222 ATGCCCTCCGTGACCCAGAGAGAAAGTTTCTCTGCGACCGCACCCTCTGGCGAATCCCCT 20281 || | || | ||||||| ||| | || ||| | || || ||| | || || | Sbjct 17729 GGTAAAACCATTACTC--AGAGAAAATTTTTATGTGACAGAACACTGTGGAGGATTCCGT 17786 Query 20282 TCTCCTCGAACTTCATGTCCATGGGGTCCCTCACAGATCTCGGACAGAACCTACTGTATG 20341 ||||||| ||||| ||||||||||| | || |||||||| ||||| || | || |||| Sbjct 17787 TCTCCTCCAACTTTATGTCCATGGGAACACTAACAGATCTGGGACAAAATTTGCTATATG 17846 Query 20342 CCAATGCCGCGCATGCCCTAGACATGACTTTTGAGATGGATCCCATCAATGAGCCCACTC 20401 | ||| | || ||||| |||||||||| | || | ||| | || | || || ||| Sbjct 17847 CAAATTCAGCTCATGCTTTAGACATGACAGTCGAAGTAGATTCAATGGAGGAACCAACTT 17906 Query 20402 TGCTGTACGTTCTGTTTGAGGTGTTTGACGTGGCCCGCGTTCACCAGCCCCACAGAGGCG 20461 || | || ||||| || |||||| || | | || || ||||| || |||| | Sbjct 17907 ATCTCATGATGCTATTTGAAGTATTTGACATGTGCAGAGTGCATCAGCCTCAACGAGGTG 17966 Query 20462 TGATCGAAGTGGTGTACTTGAGAACGCCATTCTCAGCCGGCAACGCTACCACATAAGTGC 20521 | || ||||| | || | ||||| || || || || || ||||| | |||||| | Sbjct 17967 TCATAGAAGTTATTTATCTAAGAACCCCCTTTTCGGCAGGTAACGCCGCAACATAAATAT 18026 Query 20522 CGGCTTCCCTCTCAGGCCCCGCGATGGGTTCTCGGGAAGAGGAGCTGAGATTCATCCTTC 20581 || |||| ||| || || || | || ||| ||| || Sbjct 18027 GGG--GACCTCAGAGG--ACGAAAT-----------AAAACGA------ATT-ATC--TC 18062 Query 20582 ACGATCTCGGTGTGGGGCCATACTTCCTCGGCACTTTCGATAAACACTTTCCGGGGTTCA 20641 |||| | ||| || | || | || || | ||||||| |||||||||||| | Sbjct 18063 -CGATTTGAATGT---ACCTTGTTTTTTGGGTACCTATGATAAACGCTTTCCGGGGTTTA 18118 Query 20642 TCTCCAAAGACCGAATGAGCTGTGCCATAGTCAACACTGCCGGACGCGAAACCGGGGGCG 20701 || || ||| | | |||||||||| || ||||| | |||||| || || | Sbjct 18119 TCCGAAAGGACAGGTTATGCTGTGCCATTGTAAACACCGGGCTTCGCGAAGAGGGCGGTG 18178 Query 20702 TGCATTGGCTGGCCATGGCTTGGCACCCAGCCTCGCAGACCTTTTACATGTTTGACCCTT 20761 | |||||| | || | |||||| | || | || |||||||||||||| || | Sbjct 18179 TCCATTGGATTGCGTTTGCTTGGAATCCCTATATTAAAACATTTTACATGTTTGATCCAT 18238 Query 20762 TCGGTTTCTCGGATCAAAAGCTAAAGCAAATTTACAACTTTGAGTATCAG 20811 |||| |||||||||||| | | || || |||||||||| || ||| || Sbjct 18239 TCGGATTCTCGGATCAAGATTTGAAAAAAGTTTACAACTTCGAATATGAG 18288 Score = 172 bits (190), Expect = 1e-38 Identities = 269/383 (70%), Gaps = 4/383 (1%) Strand=Plus/Plus Query 3787 GGTGTTGTAAATAATCCAGTCATAC--TGACTGTGCTGGGCGTGGAAGGAAAAGATGTCT 3844 |||| |||| | ||||| ||||| ||| ||| || ||| ||| |||||| ||| Sbjct 3627 GGTGGTGTACACGATCCAATCATAAGATGAGTGTAA--GGAATGGTAGGCAAAGATATCT 3684 Query 3845 TTTAGAAGAAGGGTGATTGGCAAAGGGAGGCTCTTAGTGTAGGTATTGATAAATCTGTTC 3904 |||| | |||||||||| || || |||| ||||| || ||||| ||||||||||| Sbjct 3685 TTTAATAATAGGGTGATTGCTAAGGGTAGGCCTTTAGTATAAGTATTAATAAATCTGTTT 3744 Query 3905 AGTTGGGAGGGATGCATTCGGGGGCTAATAAGGTGGAGTTTAGCCTGAATCTTAAGGTTG 3964 || || | ||| |||||| |||||| | | || |||||| ||||| || || || Sbjct 3745 AGCTGAGCGGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAATTTTTAGTGTG 3804 Query 3965 GCAATGTTGCCCCCTAGGTCTTTGCGAGGATTCATGTTGTGCAGTACCACAAAAACAGAG 4024 | || || || | || ||||| || || ||||| || || | ||||||||| | | || Sbjct 3805 GATATATTTCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCACAAACAGATAG 3864 Query 4025 TAGCCTGTGCATTTGGGGAATTTATCATGAAGCTTGGAGGGGAAGGCATGAAAAAATTTT 4084 || || |||| ||| |||| ||| || || || || || || |||||||||||| Sbjct 3865 TACCCGCTGCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGTGAAAAAATTTT 3924 Query 4085 GAGATGGCTTTATGGCGCCCCAGGTCTTCCATGCATTCGTCCATAATAATAGCAATAGGC 4144 | || | | | | || | | |||||| || || || || ||||| || || || Sbjct 3925 GCAATAGGGCTGTTCCCTCCTAAATTTTCCATACACTCATCAATGATAATGGCTATGGGT 3984 Query 4145 CCGGTTTTGGCTGCCTGGGCAAA 4167 ||||||||||| ||||| |||| Sbjct 3985 CCGGTTTTGGCCGCCTGTACAAA 4007 Score = 134 bits (148), Expect = 3e-27 Identities = 407/620 (66%), Gaps = 13/620 (2%) Strand=Plus/Plus Query 5773 TTGTCTAGCTTAGTGGCAAAGCTGCCATACAGGGCATTGGACAGCAGTTTGGCAATGCTT 5832 || |||| | | ||||||||| || ||||| || || |||| |||||| || |||||| Sbjct 5601 TTATCTAACCTGGTGGCAAAGGAACCGTACAGTGCGTTTGACAACAGTTTAGCGATGCTT 5660 Query 5833 CTGAGAGTTTGGTTTTTCTCTTTATCCGCCCTTTCCTTGGGCGCAATGTTAAGTTGC-AC 5891 | | || ||| | | ||| ||||| || || | ||| || ||| || || || Sbjct 5661 CGCTGTGTGCTGTTGTGGTTTTTTTCCGCGGCCTCTTTTGCCGCTATATTA-GTGGCTAC 5719 Query 5892 GTAGTCTCTAGCCAGACACTCCCACTGGGGAAATACTGTGGTGCGGGGGTCGTTGAG-AA 5950 ||| ||||| |||| || | |||||| ||||||||| || || || || Sbjct 5720 GTATTCTCTTGCCACGCAATTCCACTGCTCAAATACTGTAACTCGCTCATCTGGGACCAA 5779 Query 5951 TTTGGACTCTCCAGCCGCGGTTATGAAGCGTGATGGCATCCAAACAAGTTACCACTTCCC 6010 | || |||| || || ||||| | || |||||||| | | || ||||| | Sbjct 5780 CCTAATCT-TCCATCCTCGATTATGCAAAGTAATGGCATCGATGGACGTGCATACTTCGC 5838 Query 6011 CCCGTAGTGTCTCGTTGGTCCAGCAGAGGCGACCTCCTTTTCTGGAGCAGAAGGGCGGTA 6070 | | || | || || |||||||| || || || |||||||| || || || ||||||| Sbjct 5839 CTCTTAAATTTTCATTTGTCCAGCAAAGACGCCCGCCTTTTCTCGAACAAAATGGCGGTA 5898 Query 6071 TAACGTCCAAGAATGCTTCTGGGGGTGGGTCTGCATCAATGGTGAATATCGCGGGCAGTA 6130 ||| || ||| || |||| | || | ||| |||||||| | || || || | | Sbjct 5899 AAACATCTAAGTATTCTTCGGCAGGGGCGTCAGCATCAATTACAACAATGGCCGGTAACA 5958 Query 6131 GGGTGCGATCAAAATAGTCAATGGGTCTGTGCAACTGGGTT---AGGCGGTCTTGCCAGT 6187 ||| | ||||||||| ||| | ||| || | |||| | ||| | | | | Sbjct 5959 GGGCAGGGTCAAAATAGGAAAT---TTTGT-CACC--GGTTGCAAAGCGTTTTGAATACT 6012 Query 6188 TTTTAATTGCAAGCGCTCGATCAAAGGGGTTCAAAGGTTTTCCCGCTGGGAAAGGATGGG 6247 | | || | || |||||||| || | ||| || || | ||||| | Sbjct 6013 GATAGAGAGCCAAGTTTCTGTCAAAGGGATTAAGTGGTGGGCCAAAGGGCATGGGATGCG 6072 Query 6248 TGAGGGCGCTGGCATACATGCCGCAGATGTCATACACATAGATGGCTTCTGTTAGGACGC 6307 | | |||||||||||||| ||| | || ||||| ||||| || | ||| | || | Sbjct 6073 TTAATGCGCTGGCATACATTCCGGAAATATCATAAACATAAATAGGTTCCTCAAAAACAC 6132 Query 6308 CTATGTAGGTAGGATAGCATCGGCCGCCCCGAATACTTTCTCTAACGTAATCATACATTT 6367 ||||||| || || ||||| || || || | || |||||||| || ||||||| || | Sbjct 6133 CTATGTAAGTGGGGTAGCACCGTCCCCCTCTGATGCTTTCTCTTACAAAATCATAAATGT 6192 Query 6368 CATTGGAAGGGGCTAGTAGA 6387 | | || ||||| || ||| Sbjct 6193 CGTGTGACGGGGCCAGAAGA 6212 Score = 131 bits (144), Expect = 4e-26 Identities = 259/382 (68%), Gaps = 1/382 (0%) Strand=Plus/Plus Query 17781 AGATGGCTACCCCGTCGATGCTGCCGCAATGGTCCTAC-TGCACATCGCCGGTCAGGACG 17839 ||||||| || || |||||||| ||||||||||| ||| | || ||||| || || || | Sbjct 15312 AGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAGATG 15371 Query 17840 CGTCCGAGTACCTGTCCCCCGGCTTGGTGCAATTCGCACAAGCCACCGAATCCTACTTTA 17899 | || || || | || || | ||| ||||| ||| || |||||| | |||||| Sbjct 15372 CTTCAGAATATTTATCTCCTGCGTTGTGTCAATTTGCAAGCGCAACCGAAACGTACTTTT 15431 Query 17900 ACATTGGGAACAAGTTTAGAAACCCCACCGTCGCCCCGACGCACGATGTCACCACGGAGC 17959 | | | | || |||||||| || || || || ||||| |||||||| || ||||| Sbjct 15432 CCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACGGAAA 15491 Query 17960 GTTCGCAGCGTCTGCAGCTCCGCTTCGTGCCCGTAGACCGGGAGGACACACAGTACTCCT 18019 | |||||| | || || | | || || || | || || || |||||||| | | Sbjct 15492 GATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTATACTT 15551 Query 18020 ACAAAACCCGCTTCCAGCTAGCCGTGGGCGACAACCGGGTGCTGGACATGGCCAGCACGT 18079 ||| |||| || || || |||| || || ||| | | | || ||| || | | Sbjct 15552 TTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGTAGTT 15611 Query 18080 ATTTTGACATCCGCGGTACGCTGGAGAGGGGCGCCAGTTTCAAGCCTTACAGCGGCACGG 18139 ||||||| || || | | | || || || || ||| || |||||||| ||||| | Sbjct 15612 ATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGCACAG 15671 Query 18140 CCTACAACTCCTTTGCCCCCAA 18161 | ||||| | ||||||| || Sbjct 15672 CATACAATAACCTTGCCCCGAA 15693 Score = 89.7 bits (98), Expect = 1e-13 Identities = 211/314 (67%), Gaps = 10/314 (3%) Strand=Plus/Plus Query 5207 CTTTCAGGCGGTGCTTGCCTCGGGTGTCCATGAGTTCCTTTCCCCT--TTGGGTGAGAAA 5264 |||| || | ||||| ||| ||| ||||| ||| || | |||| || || | || Sbjct 5044 CTTTAAGTCTATGCTTACCTTTGGTCTCCATCAGT--CTATGCCCTGTTTCTGTCACGAA 5101 Query 5265 CATGCTGTCCGTGTCTCCGTAGACAAATTTGAGAATCC---GGTCTTCTAGGGGAGTGCC 5321 || ||||| || |||||||| | |||| | ||| | |||| | | || || || Sbjct 5102 CAAACTGTCAGTATCTCCGTAAATCGATTTTAAAATTCTGCGGTC--CCAAGGTCGTCCC 5159 Query 5322 TCTGTCTTCTAAATAGAGGATGTCTGCCCATTCAGAGACAAAGGCTCTAGTCCACGCGAG 5381 | ||||| |||| | | || |||||||| || || || | ||||| ||||| Sbjct 5160 -CAATCTTCAGAATATAAAAATTCCGCCCATTCGGAAGTGAAAGCGCGGGTCCAGGCGAG 5218 Query 5382 GACAAATGAAGCTATGTGTGAGGGGTATCTGTTATTAAATATGAGAGAGGAttttttttG 5441 |||||||| || || || || ||||| | ||||||| ||| | | ||| | |||| Sbjct 5219 AACAAATGACGCGATTTGGGATGGGTAGCGGTTATTATCTATTTGTGGGGAAGTATTTTC 5278 Query 5442 CAAAGTATGCAGGCACAGGGCTGAGTCATCAGCTTCCAGAAAGGTGATTGGTTTGTAAGT 5501 | | || ||||| ||| || || |||| || || || |||||||| || | | Sbjct 5279 TATCATTTGAAGGCATAGGTGAGAATCGTCAGATTGCAAGAAAGTGATTGGCTTAAACTT 5338 Query 5502 GTATGTCACGTGAT 5515 ||||||||||||| Sbjct 5339 ATATGTCACGTGAT 5352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110020359891728