Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= AC_000020.1
Length=31323
Score E
Sequences producing significant alignments: (Bits) Value
seq4931 558 7e-155
>seq4931
Length=27746
Score = 558 bits (618), Expect = 7e-155
Identities = 1215/1797 (68%), Gaps = 49/1797 (3%)
Strand=Plus/Plus
Query 18154 GGAAATGTTGAGGCCATGGAAATCAACCTCAATGCCAACCTCTTCAAAAGCTTCCTTTAC 18213
||||||||||| ||||||||||||| | |||||||| | || | || || ||
Sbjct 16526 GGAAATGTTGAATGCATGGAAATCAACATAGCGGCCAACCTGTGGAAGAATTTTCTGTAT 16585
Query 18214 TCCAATGTGGCCTTATACTTGCCTGATGCCTTTAAATACACACCTGAAAACATTGTG--G 18271
|| ||| | || | || |||| ||| ||||||| ||| || | ||| | || |
Sbjct 16586 TCTAATATCGCGCTGTATCTGCCCGATAACTTTAAAACCACTCCCGCAAATGTGGTATTG 16645
Query 18272 CCCCTGCCAATGTGAATACCTATGCTTACATGAATGTTAGATTACCCGCCGCCAACCTTA 18331
|| | | | | || ||||||||||||||| | | | || |||| ||
Sbjct 16646 CCGCAGGATCAGCGGCTA--TATGCTTACATGAATTCTCGCATTCCAGCCGGGGGTCTGG 16703
Query 18332 TAGATACCTTTGTAAATATTGGCGCCAGATGGTCACCAGATGTAATGGACACTGTTAATC 18391
|||| | | | || || || |||| |||||| |||||| |||||||| |||||||
Sbjct 16704 TAGAGGATTATATCAACATAGGAACCAGGTGGTCAATAGATGTGATGGACACGGTTAATC 16763
Query 18392 CTTTCAACCACCACAGGAATGCAGGACTCCGCTACCGTTCACAACTGCTTGGCAATGGCC 18451
| || || || ||||| ||| | || | | ||| | || || || | || ||||| |
Sbjct 16764 CATTTAATCATCACAGAAATACTGGTTTGAGGTACAGGTCTCAGCTATTAGGAAATGGTC 16823
Query 18452 GCTATTGCTCGTTCCATATTCAGGTCCCTCAAAAATTTTTTGCAATCAAAAATCTCCTCC 18511
||||| || || ||||||||||| || ||||| ||||||||| | |||| | | || |
Sbjct 16824 GCTATGCTTCCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCACTTAAAAGTTTGCTTC 16883
Query 18512 TACTGCCTGGAACGTACACGTACGAGTGGTCTTTCAGAAAGGATGTAAACATGATCCTTC 18571
| || || ||| |||||| ||||| |||||||| ||||| |||||||||||||| | |
Sbjct 16884 TGCTACCGGGATCGTACAGTTACGAATGGTCTTTTAGAAAAGATGTAAACATGATTTTGC 16943
Query 18572 AAAGCAGCTTGGGCAATGACCTCCGAGTGGATGGGGCCACCATCAACA-TTCAGAGCATC 18630
| || | | |||||||| || | | ||| || | | || |||| || | |||||
Sbjct 16944 AGAGTACTCTTGGCAATGATCTGAGGGAGGACGGAG-CGTCAGTAACATTTGACAGCATT 17002
Query 18631 AACCTATATGCAAGCTTTTTCCCAATGGCACACAACACTGCCTCCACTCTGGAAGCCATG 18690
| ||||| ||| | || || || ||| | || |||||||| || ||||||||| | |||
Sbjct 17003 AGCCTATTTGCTACTTTCTTTCCGATGTCTCATAACACTGCTTCTACTCTGGAAACTATG 17062
Query 18691 CTGCGCAACGATGTAAATGACCAGTCCTTTGCAGACTACCTGTCTTCTGCCAACATGCTT 18750
|| ||||| || || || || |||||||| | ||||| || || | |||||||||
Sbjct 17063 CTTCGCAATGAGGTTAACGATCAGTCCTTCGGCGACTATCTTTCCAGCGTTAACATGCTT 17122
Query 18751 TATCCCATCCCTGC-CAACACTACTAACCTGCCAATCTCCATTCCCGCCAGAAACTGGGC 18809
||| | || ||| | || || || | |||| ||||| ||||| || || || |||||
Sbjct 17123 TATGCTATTCCTCCGCATCA-AACAACAGTGCCTATCTCTATTCCAGCAAGGAATTGGGC 17181
Query 18810 GGGATTTAGAGGGTGGAGCTTTACCAGAATTAAGCAACGAGAAACTCCTGCCCTGGGCTC 18869
|| |||||||| ||| ||||| ||| | || |||| ||||| || || | |||||
Sbjct 17182 GGCCTTTAGAGGTTGGGCATTTACTAGACTAAAACAACAGGAAACACCAACCATTGGCTC 17241
Query 18870 GCCTTATGATCCCTACTTCACTTATTCGGGCAGTATTCCATATCTGGATGCAACTTTTTA 18929
| | ||| || ||||| | || |||||| || || ||| |||||| || |||||
Sbjct 17242 TGCATTTGACCCATACTTTAGGTACTCGGGCTCAATCCCGTATTGGGATGCGACCTTTTA 17301
Query 18930 CCTCAGCCACACCTTTAGAAGAGTTTCCATCATGTTTGACTCTTCCGTGTCTTGGCCTGG 18989
| ||||| | |||| || |||| |||||| ||||| || |||||||||
Sbjct 17302 TTTATCTCACACTATCAGAAAGGTGGCCATACAGTTTGATTCTTCAGTAAGTTGGCCTGG 17361
Query 18990 CAATGACAGGCTGCTTACCCCCAATGAGTTTGAGATTAAAAGGTATGTAGACGGTGAAGG 19049
|||||||| || | | || ||||| ||| | || ||||| | || |||| |||||
Sbjct 17362 AAATGACAGACTTTTAATACCTAATGAATTTCACATAAAAAGAGAGGTGGACGCGGAAGG 17421
Query 19050 TTACAATGTGGCCCAGTCCAACATGACAAAAGACTGGTTCATGGTTCAAATGCTAGCCCA 19109
|| || | ||| || || || || || |||| ||| |||||||||| || ||
Sbjct 17422 CTATAACACCTCTCAGAGCATAATTACTAAGGATTGGTATATGATTCAAATGCTCGCTCA 17481
Query 19110 CTACAACATCGGCTACCAAGGCTACCACCTGCCAGAAAGCTACAAGGACAGAATGTACTC 19169
|||||| ||||| |||||||| | ||||| || | || || || ||| |||| ||
Sbjct 17482 CTACAATATCGGATACCAAGGTTTTCACCTACCCACAGATTATAAAGATAGATTGTATTC 17541
Query 19170 CTTCCTAAGAAACTTTGAGCCCATGTGCAGACAGTTGGTGGA-CGTGGCCAACTATGCTG 19228
||| ||||||| ||||| |||||||| ||||| | ||||| | ||| || |
Sbjct 17542 CTTTTTAAGAAATTTTGAACCCATGTGTAGACAAGTTGTGGATCCTGG-TAAGACGGAAA 17600
Query 19229 CCTACCAGCCGGTTACCGTGGGCCACCAGCATAACAATTCTGGTTATGCTAGCGCCCTTT 19288
|| || || ||| | | | |||||||| ||||| |||| | | || ||
Sbjct 17601 AATATCAACCCGTTGCTCTTAAATATCAGCATAATAATTCAGGTTTT--AAAAACCATTA 17658
Query 19289 CGG--CCTTTAACCCGCGTGAGGGGCACCCATACCCAGCAAACTGGCCTTACCCACTCAT 19346
|| ||||| ||| | || || || || || |||||||||| ||| |||||
Sbjct 17659 TGGACCCTTT---GGGCGACAAGGCCATCCTTATCCCTGTAACTGGCCTTTCCCGCTCAT 17715
Query 19347 TGGAGCCAATGCAGTACCCACTGTCACCCAGAAAAAGTTCCTCTGCGACAGGTCCCTGTG 19406
|||| | |||| || | || |||| ||| || | || ||||| | |||||
Sbjct 17716 CGGAGAACAGGCAGGTAAAACCATTACTCAGAGAAAATTTTTATGTGACAGAACACTGTG 17775
Query 19407 GCGCATCCCATTCTCCTCCAACTTTATGTCTATGGGAACCCTCACTGACCTGGGCCAAAA 19466
| | || || |||||||||||||||||||| |||||||| || || || ||||| |||||
Sbjct 17776 GAGGATTCCGTTCTCCTCCAACTTTATGTCCATGGGAACACTAACAGATCTGGGACAAAA 17835
Query 19467 CCTGCTGTACTCTAACTCCGCCCACGCCCTTGACATGACTTTTGAGGTTGATGCCATGAA 19526
|||| || | || || || || || | |||||||| | || || ||| | ||| |
Sbjct 17836 TTTGCTATATGCAAATTCAGCTCATGCTTTAGACATGACAGTCGAAGTAGATTCAATGGA 17895
Query 19527 TGAGCCCACTCTGTTGTACG-TTTTGTTTGAAGTGTTCGACGTG-GCACGCGTCCATCAG 19584
|| || ||| | | | | | | |||||||| || ||| || ||| | || ||||||
Sbjct 17896 GGAACCAACT-TATCTCATGATGCTATTTGAAGTATTTGACATGTGCA-GAGTGCATCAG 17953
Query 19585 CCCCACCGGGGGGTTATTGAGGTAGGGTACCTCAGAACTCCCTTCTCCGCCGGCAACGCC 19644
|| || || || || || || || || || ||||| ||||| || || || ||||||
Sbjct 17954 CCTCAACGAGGTGTCATAGAAGTTATTTATCTAAGAACCCCCTTTTCGGCAGGTAACGCC 18013
Query 19645 ACCACCTAAGCTAATATGGCGGAAGGAGGGTCCTCAGAAGAAGAGCTGCGAGCCATAGTA 19704
| || || |||||| ||| ||||||| || || | | | | ||
Sbjct 18014 GCAACATA----AATATG---------GGGACCTCAGAGGACGAAAT--AAAACGAATTA 18058
Query 19705 CATAACTTAGGCGTGTCTCCATTTTTCTTGGGCACCTTTGACAAGAGGTTTCCGGGTTTC 19764
| | | ||| || | ||| ||||| |||| ||| || | |||||||| ||
Sbjct 18059 TCTCCGATTTGAATGT-ACCTTGTTTTTTGGGTACCTATGATAAACGCTTTCCGGGGTTT 18117
Query 19765 ATCTCTTCACAAAGAATGG----CCTGCGCCATAGTAAACACCGCAGGC--CGAGAAACG 19818
||| | || || || ||| ||||| |||||||||| ||| || ||| |
Sbjct 18118 ATC----CGAAAGGACAGGTTATGCTGTGCCATTGTAAACACCG--GGCTTCGCGAAGAG 18171
Query 19819 GGGGGCGTGCACTGGCTGGCCATGGCCTGGAACCCCCGCTCAAAAACGTTTTACATGTTT 19878
|| || || || ||| | || | || ||||| ||| ||||| ||||||||||||
Sbjct 18172 GGCGGTGTCCATTGGATTGCGTTTGCTTGGAATCCCTATATTAAAACATTTTACATGTTT 18231
Query 19879 GACCCCTTTGGATTTTCAGACAGTAAGCTCAAGCAAGTGTACAGCTTTGAGTATGAG 19935
|| || || ||||| || || | | || |||| |||| ||| || ||||||
Sbjct 18232 GATCCATTCGGATTCTCGGATCAAGATTTGAAAAAAGTTTACAACTTCGAATATGAG 18288
Score = 233 bits (258), Expect = 4e-57
Identities = 1736/2752 (63%), Gaps = 134/2752 (5%)
Strand=Plus/Plus
Query 3724 TGTATACAATCCAATCA-AAGTT-AGTATTGAGGCGGTGGTAGTTAAAAATATCCTTAAG 3781
|||| || ||||||||| ||| | ||| | ||| |||||| ||| ||||| || |
Sbjct 3632 TGTACACGATCCAATCATAAGATGAGTGTA-AGGAA-TGGTAGGCAAAGATATCTTTTAA 3689
Query 3782 CAGGAGGGAAATAGCAGTGGGTTGTCCCTTAGTGTAGATGTTAATAAACCTATTAAGTTG 3841
| |||| || || |||| | || ||||| || | |||||||| || || || ||
Sbjct 3690 TAATAGGGTGATTGCTAAGGGTAGGCCTTTAGTATAAGTATTAATAAATCTGTTTAGCTG 3749
Query 3842 GGAAGGATGCACCTTAGGACTGATGATATGCATTTTTGCTTGGATTTTTAAGTTGGCAAT 3901
| || |||| || || || | ||||| ||| ||||| ||||||| ||| ||
Sbjct 3750 AGCGGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAATTTTTAGTGTGGATAT 3809
Query 3902 GTTTCCCCCCTGGTCTCGTCTGGGATTCATGTTGTGCAAGACCACTATAACAGAGTAGCC 3961
||||| | ||| || || ||||| || || || ||||| | | | |||| ||
Sbjct 3810 ATTTCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCACAAACAGATAGTACCC 3869
Query 3962 TGTGCACTTGGGAAACCTGTCTAGCAGTTTAGAGGGAAAGGCGTGAAAGAACTTGGCTAT 4021
||||| |||| | | || | ||||| || ||||| |||||||| || || || ||
Sbjct 3870 GCTGCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGTGAAAAAATTTTGCAAT 3929
Query 4022 GCCCCTGTTGCCCCCTAAGTCTTCCATGCACTCATCCATTACAATAGCTAGTGGCCC--T 4079
||||| || ||||| | |||||| |||||||| || | ||| |||| || || |
Sbjct 3930 AGGGCTGTTCCCTCCTAAATTTTCCATACACTCATCAATGATAATGGCTATGGGTCCGGT 3989
Query 4080 TTAGAAGCGGCCCTTGCAAAAACATTGGTAGGGTTGGTAACATCATAGTTGGCCTCATTG 4139
|| | || ||| | |||| ||| | || | | |||||| || | || ||
Sbjct 3990 TTTG--GCCGCCTGTACAAATTTATTATTTGGATGCCCTAAATCATAATTTTCTTCGTTT 4047
Query 4140 GTGAGTTCTGCATAAGACATTTGCACAAA-CTTGGGCATGATGCTGCCACTCTGAGGAAC 4198
||| || || || | |||| | || | || | ||| | ||| ||||||| ||
Sbjct 4048 AAGAGATCCTTGTACGATAGTTGCGCGAATCGAGGAGTTAATG-TACCAGTCTGAGGCAC 4106
Query 4199 -----CACCGTGTTTTCGGGGCCTGCAAGGAAGTTTCCCTCACATATTTGGGTTTCCCAT 4253
|||| | |||| | || | |||||||||| ||||| | || ||||
Sbjct 4107 AATTTCACCATTCTTTCC---CATGTTAT--AGTTTCCCTCTATAATTTGTGCTTTCCAT 4161
Query 4254 GCTGCAATTTCCTGGGGAGGAATCATGTCCACCTGGGGGGTGATAAAAAAGACTGTTTCT 4313
| ||||||||| || || |||||||| | | ||||| | ||| || | || ||
Sbjct 4162 GACATAATTTCCTGTGGGGGGATCATGTCTGCATAAGGGGTTACAAAGAATATAGTCTCC 4221
Query 4314 GGGGCGGGGACTA-TAAGCTGGGCAGACATGAGGTTCCTAAGAAGCTGGGACTTGCCACA 4372
|||||||| || ||| ||| | ||||| || || || | | ||||| || ||||
Sbjct 4222 GGGGCGGGATTTAATAATTTGGAC-GACATAAGATTTCTCAATAATTGGGATTTTCCACT 4280
Query 4373 CCCTGTGGGCCCATACACTGCAGCAATAAAGGGTTGCTTGT-AGTAGTTAAGGGAT-GCA 4430
|| || || ||||| | | |||| | ||||| | | | | |||| | |||
Sbjct 4281 ACCAGTTGGACCATATATGACCCCAATCACCGGTTGAGTATCACCATTTAAACTACCGCA 4340
Query 4431 CAGCTTCCATCTTT-----ATTAAGGTAC--TTACTGACCTTCATGCAACACTGGGTTAT 4483
|| ||||| ||| ||| | | | ||| | | || | |||| ||
Sbjct 4341 CAA--TCCATATTTCAAACATTTATTTTCATTTAATATCATTTTTTCAAC-------TAG 4391
Query 4484 GCTATCTTGAATATCTAGTAGGTCATTTAACAGACTGTCTCCCCCCATAGAAAGCAGTTC 4543
| || || | || || || ||||| | | ||||| | | |||||| |||||
Sbjct 4392 GGCATTTTCA---TCGGCTAAATCTTTTAATAAGTTTTCTCCAGCGAGAGAAAGAAGTTC 4448
Query 4544 CTCAAAAGAGGCAAAGTTTTTGAGGGGCTTAAGTCCCTC-TGCATATGGCATGTTTGTTA 4602
| | | | | ||| ||| || || || || ||||| || | || ||| ||| |||
Sbjct 4449 GTTTAGACATGAAAAAGATTTTAGTGGTTTTAGACCCTCATGGAAATT-CATATTTTTTA 4507
Query 4603 AGCTTTGCTGAAGAGTTTGCAACCTGTCCCAGAGGCTTTTTAAGTCATCCACTGCAGCTC 4662
| || || | || || ||| ||||||| || | ||| | ||||| | |||||
Sbjct 4508 AACTGGTTTGTAAAGCTTCCAATTTGTCCCATAGATTAGTTACATGTTCCACGGTAGCTC 4567
Query 4663 CATCCAGGTAGTTTCTGTGTTTCTTGGGTTTGGATGCTTGCGGCTGTATGGAATGAGACG 4722
||||||| || || || || || || |||||||| || || || || ||||
Sbjct 4568 CATCCAGCAAGGGTCGGTATTCCTGGGATTTGGATGGTTTTTGCAATAAGGTCTGAGCTC 4627
Query 4723 ATGCATGTCTAG--AGCATGCAG--GGTTTTGTCCTTCCATGGCCTCAGCTTCCTTGTTA 4778
| ||| | || || || || | ||||| |||| |||| | | || || |
Sbjct 4628 CACCTCGTCCACCCAGTATAAAGTGGGATCTGTCC----ATGGTCTCACCGTTCTGGTGA 4683
Query 4779 GGGTGGTTTCTGTCACTGTGAAAGGTTGCACGTGGGCCTGCACGCTGGTGAGGGTCCTGC 4838
|||||| ||||||||| ||||| || || ||| ||| | | || || |
Sbjct 4684 GGGTGGCTTCTGTCACAGTGAACGGATGAGTTCCGGCTTGCTTGGAAGCAAGTGTTTTCT 4743
Query 4839 GCAGGCTCATCCTGCTGGTTTTGAAGA---CGTCCGAGCCCTGCTGCATGTCAGCATAGT 4895
|| |||| ||| || | || | |||| |||||| |||||||
Sbjct 4744 TTAGAGTCATTCTGGACGTCGTAAATCTCTCTTCCGT---CTGCTGGCGAGATGCATAGT 4800
Query 4896 AGCAAGCTTTTAGCACATCATAAGAGAGGGTGGAGGTGGCATGACCTTTGGCCCTGAGCT 4955
| |||||| ||| | |||||||| ||| | | ||| | |||||||||||||| | |
Sbjct 4801 AACAAGCTCTTAAAATATCATAAGTGAGAGCTGTAGTGTCGTGACCTTTGGCCCTTAATT 4860
Query 4956 TGCCCT----TGCCCACGTGATGGCACTTAGGGCAGGTGGTGTCCTTGAGAGCATACAAC 5011
| || ||| | | || || ||| ||| | || || |||||||||| |
Sbjct 4861 TTCCGGAGGATGCTCTC----TGACAGTTATCGCACCATATTTCTTTTAGAGCATACATC 4916
Query 5012 TTGGGCGCCAGGTACACTGATTCTGAGCTGTAAGCATCC-GATCCACACTTCTCACACTG 5070
|| || || | |||| || | || | || || | ||| ||| || ||
Sbjct 4917 TTTGGAGCTAAAAACACAGACTTTGGGGCATATGCGGGCTGATT-ACAGCGTTCGCATCT 4975
Query 5071 TGTTTCACACTCTACTAGCCAAGTGAGCTCTGGGT--TGCTGGGATCAAAGACTAGCTTG 5128
||| ||||| ||||||| ||| || | || | |||| |||||||| || ||
Sbjct 4976 TGTCTCACATTCTACTAACCATGTTAAGGAAGGATCATGCTC--ATCAAAGATTAAATTA 5033
Query 5129 CCTCCAttttttttGAGTCGTTTCTTACCTTTTTCTTCCATCAATTTGTAACCCTCCATG 5188
| |||| ||| |||| | ||||||||| ||||||| | | | |||| |
Sbjct 5034 TTGCTGTTTTCTTTAAGTCTATGCTTACCTTTGGTCTCCATCAGTCTATG-CCCTGTTTC 5092
Query 5189 -GTGGTGAAGAGGCTGTCAGTGTCTCCGTAGACAGATTTTAGGACCCTGTTTTCAAGTGG 5247
|| ||| | |||||||| |||||||| | ||||||| | ||| || ||
Sbjct 5093 TGTCACGAACAAACTGTCAGTATCTCCGTAAATCGATTTTAAAATTCTGCGGTCCCAAGG 5152
Query 5248 GGTTCCCGCGTCGTTTTCGTAGAGAAACTGAGACCACTCTGAGACAAATGCCCGGGTCCA 5307
|||| || | || | ||| | | ||| || || || || ||||||||
Sbjct 5153 TCGTCCCCAATCTTCAGAATATAAAAATTCCGCCCATTCGGAAGTGAAAGCGCGGGTCCA 5212
Query 5308 TGCTAGAACAAAGGAGGCAATTTGTGAGGGATATCTGTTATTGGCTATTAGGGGGGTGGA 5367
|| |||||||| || || ||||| || || || | |||||| ||||| | |||| |
Sbjct 5213 GGCGAGAACAAATGACGCGATTTGGGATGGGTAGCGGTTATTATCTATTTGTGGGGAAGT 5272
Query 5368 CTTTTCTAAAGTGTGTAAACAAAAGTCATCATCTTCAGCAT-CAATAAACATGATTGGCT 5426
||||||| | || | || | || | ||| |||| | ||| ||| |||||||||
Sbjct 5273 ATTTTCTATCATTTGAAGGCATAGGTGAGAATCGTCAGATTGCAAGAAAG-TGATTGGCT 5331
Query 5427 TATAATGGTATG--ACGTCAT----GCTAAAATTATGCATAAAAGGCG-CTTCGGCGAGG 5479
|| | | |||| |||| || | | |||| |||||| || | | || |||| |
Sbjct 5332 TAAACTTATATGTCACGTGATCTGTGTCAGAATT-TGCATATAAAGTGTCTATGGCGGGA 5390
Query 5480 GGGTC---TTTAGTTGGATCTTCTTCGCTGCAA--GAAGGCGGTGCCAACTGGCGAACGT 5534
||| | ||||||||| ||| ||| || || ||||| | | |||||
Sbjct 5391 GGGGCCTTTTTAGTTGGCGGTTC--CGCATCATCGGAGCGCGGTACGTCATCGCGAAGCG 5448
Query 5535 CAGAATTGACAGGTGGGTACGCTACGACAAATTCTGGCATGATTTCTGCACACAAATTGT 5594
|| | |||| ||| || |||||||| || | || | | ||| |
Sbjct 5449 AAG------CCGGTGAGTAACAGGCGGTGAATTCTGGGATAACACGGGCGCTTAGATTAT 5502
Query 5595 CTGTTTCTATGTATGAGGATGATTTGACTACATAGGC---ACCAGAAGCAATTTCTTTAG 5651
|||| |||||||| ||| | | |||| | || |||| || || |||||
Sbjct 5503 CTGTCTCTATGTAACAGGTGGCGCT---TACAAAAGCTTTACCACTGGCTATGTCTTTCA 5559
Query 5652 CAATGTTTGACTCT--ATTTGATCTGAAAAAACTGtttttttGTTGTCTAGCTTGGTAGC 5709
|||| ||| |||||||| | ||| | | ||||||| || |||| | |||| ||
Sbjct 5560 TGATGTC--ACTTGTAATTTGATCCGGAAACAGTATTTTTTTATTATCTAACCTGGTGGC 5617
Query 5710 AAAAGACCCATAGAGGGCATTTGACAGCAGCTTAGCAATGCTGCGCATGGTTTGATTTTT 5769
||| || || || || || ||||||| ||| ||||| ||||| ||| || || |
Sbjct 5618 AAAGGAACCGTACAGTGCGTTTGACAACAGTTTAGCGATGCTTCGCTGTGTGCTGTTGTG 5677
Query 5770 GCTTTTGTCTGCTTCTTCTTTGGCACTGATGTTGAGCTGC-ACATACTCTCTGGCGAGAC 5828
| |||| || || | ||||| || || || || || || || ||||| || | |
Sbjct 5678 GTTTTTTTCCGCGGCCTCTTTTGCCGCTATATT-AGTGGCTACGTATTCTCTTGCCACGC 5736
Query 5829 ATTTCCACTCTGGAAACACGGTGGTTCTGGTATCAGGGATGAGGGTAACCTTCCACCCGC 5888
| ||||||| ||| || || || ||| |||| | ||| |||||| || |
Sbjct 5737 AATTCCACTGCTCAAATACTGTAACTCGCTCATCTGGGACCAACCTAATCTTCCATCCTC 5796
Query 5889 GGTTGTGCAGGGTAATAACATCTATGGAGGTTGCAATCTCC-CCGCGTAGGGGCTCGTTG 5947
| || |||| ||||| |||| ||||| || ||| || | || | || || ||
Sbjct 5797 GATTATGCAAAGTAATGGCATCGATGGACGT-GCATACTTCGCCTCTTAAATTTTCATTT 5855
Query 5948 GTCCAGCAAAGCCTGCCCCCCTTGCGTGAGCAAAATGGGGGCAGCACGTCCAAAAACTCT 6007
||||||||||| | || || || | || |||||||| || | || || || | |||
Sbjct 5856 GTCCAGCAAAGACGCCCGCCTTTTCTCGAACAAAATGGCGGTAAAACATCTAAGTATTCT 5915
Query 6008 TCTGCTGGTGGGTCAGCATCAATGGTGAAGATGCCCGGAAGAAGGTCCTTATCAAAGTAG 6067
|| || || | |||||||||||| | ||| |||| | ||| | ||||| |||
Sbjct 5916 TCGGCAGGGGCGTCAGCATCAATTACAACAATGGCCGGTAACAGGGCAGGGTCAAAATAG 5975
Query 6068 CTAATAGTTTTGT----GATT---TAGCATTTT--TTGCTCATAAGCCTTTATGGCCAGC 6118
|| |||||| | || ||| |||| | || ||| | ||||
Sbjct 5976 GAAA---TTTTGTCACCGGTTGCAAAGCGTTTTGAATACTGATA------GAGAGCCAAG 6026
Query 6119 GCCCGCTCATAGGGGTTTAGCGGTGAACCGGCGGGAAAAGGGTGTGTAAGGGCACTTGCA 6178
| ||| |||| || || |||| || ||| | || || || | || || |||
Sbjct 6027 TTTCTGTCAAAGGGATTAAGTGGTGGGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCA 6086
Query 6179 TACATGCCACATATGTCATAGACAAACACTGGCTCTTGCAACACTCCAATGTAAGTGGGG 6238
||||| || | || ||||| ||| | | || || | || || || ||||||||||||
Sbjct 6087 TACATTCCGGAAATATCATAAACATAAATAGGTTCCTCAAAAACACCTATGTAAGTGGGG 6146
Query 6239 TAGCACCTGCCTCCTCTGATGCTAAGCCTTACATACTCATACATTTCATTGGAGGGCGCC 6298
||||||| || ||||||||||| |||||| | ||||| || || | || || |||
Sbjct 6147 TAGCACCGTCCCCCTCTGATGCTTTCTCTTACAAAATCATAAATGTCGTGTGACGGGGCC 6206
Query 6299 --ATGAGGATGGTACTTAGGTGGTGTGTGTTAGGCTTTTCTGCTTTATACAAGATTTGTT 6356
| ||| || || | || ||| | | ||||| | ||| ||| | ||| |
Sbjct 6207 AGAAGAGTATTCGAC--AAATGATGTTTTTCTAACTTTTGAGTCTTAAACACCAGTTGCT 6264
Query 6357 TAAAAATGGCATGGGAGTTGGAGCTGATGGTTGGACGCTGGAAGACGTTAAA 6408
||||||| ||| || || ||||| || ||||||||||| || || |||||
Sbjct 6265 TAAAAATTGCAAAAGAATTTGAGCTAATTGTTGGACGCTGAAAAACATTAAA 6316
Score = 161 bits (178), Expect = 2e-35
Identities = 266/384 (69%), Gaps = 0/384 (0%)
Strand=Plus/Plus
Query 16932 GAAGATGGCAACCCCGTCGATGCTGCCACAATGGTCTTACATGCACATTGCTGGCCAGGA 16991
||||||||| || || |||||||| || |||||||||||| | || || || || || ||
Sbjct 15310 GAAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAGA 15369
Query 16992 CGCCGCCGAATACTTGTCTCCCGCCCTGGTTCAGTTTGCCCAAGCAACCAGTTCTTACTT 17051
|| | ||||| || ||||| || || ||| ||||| |||||| | |||||
Sbjct 15370 TGCTTCAGAATATTTATCTCCTGCGTTGTGTCAATTTGCAAGCGCAACCGAAACGTACTT 15429
Query 17052 TAAGTTGGACAACAAGTTCAGAAACCCCACTGTGGCCCCCACCCACGATGTGACCACTGA 17111
| | | | || || ||||| || || || || || || |||||||| || || ||
Sbjct 15430 TTCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACGGA 15489
Query 17112 GAGGTCGCAGCGCTTGCAGCTGCGCTTTGTGCCAGTCATGCAAGAGGATGGCCAGTACAC 17171
|| |||||| | | || | | ||||| |||| |||| ||| ||||| ||
Sbjct 15490 AAGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTATAC 15549
Query 17172 TTACAAAACCCGCTTCCAGCTTGCGGTGGGAGACAACAGGGTGCTGGACATGGCCAGTAC 17231
|| ||| |||| || || || | || || || ||||| | | || ||| ||||
Sbjct 15550 TTTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGTAG 15609
Query 17232 TTACTTCGATATCAGGGGTACCCTAGACAGAGGCCCCTCCTTCAAGCCTTACAGCGGCAC 17291
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Sbjct 15610 TTATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGCAC 15669
Query 17292 CGCCTACAATGCCCTCGCCCCCAA 17315
|| |||||| ||| ||||| ||
Sbjct 15670 AGCATACAATAACCTTGCCCCGAA 15693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 100034496605810
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