Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= AC_000191.1 Length=34185 Score E Sequences producing significant alignments: (Bits) Value seq4931 641 9e-180 >seq4931 Length=27746 Score = 641 bits (710), Expect = 9e-180 Identities = 1496/2235 (67%), Gaps = 50/2235 (2%) Strand=Plus/Plus Query 18251 TTATG--GAAGACGTGGCTCTGCAAACCCCAGACACACATTTAGTGTACAAGGTGCCAGC 18308 ||||| ||||| ||| | | ||| | ||||| || || ||||||||||| | | | Sbjct 16042 TTATGCAGAAGATTTGGATATACAAGCTCCAGATACTCACTTAGTGTACAAAGCATCTCC 16101 Query 18309 CGCCAACGTAGGCAACACGGCGGCCTTAGCGCAGCAAGCTGCGCCAAACAGAGCAAACTA 18368 || | | | || | ||| | || |||||| ||||||||||| |||| || Sbjct 16102 CGGGCATGAAAAAGACTCTCTTGCCCTCGCTCAGCAAAGCGCGCCAAACAGGCCAAATTA 16161 Query 18369 TATTGGCTTCAGAGACAATTTCATCGGTCTAATGTACTACAACAGCAATGGAAACCTAGG 18428 ||| || || || || || || ||||| |||||| || ||||| ||| | || | || Sbjct 16162 TATAGGTTTTAGGGATAACTTTATCGGGTTAATGTTTTATAACAGTAATAGCAATTTGGG 16221 Query 18429 GGTTTTGGCGGGGCAGGCTTCGCAATTGAATGCCGTCGTGGACCTGCAAGACAGAAATAC 18488 || || || || || | || || | ||||| ||| | ||||| |||||||||||||| Sbjct 16222 TGTATTAGCCGGTCAATCGTCACAGCTTAATGCTGTCATCGACCTTCAAGACAGAAATAC 16281 Query 18489 AGAGTTGTCTTACCAGCTTATGCTCGACAACCTGTATGACAGAAGCCGGTATTTTAGCAT 18548 ||| ||||| || ||||||||| | || || | | || |||| || |||| ||| | Sbjct 16282 AGAATTGTCATATCAGCTTATGTTAGATAATTTACACGATAGAACTCGATATTACAGCTT 16341 Query 18549 TTGGAACCAGGCTGTAGACAGCTATGACCCGGATGTTAGGATAATAGAGAACCACGGAGT 18608 ||||| || || || || ||||| || || || | || ||||| || ||||| Sbjct 16342 GTGGAATCAAGCCGTGGATTCATATGATCCAGAGGTCCGAATCATAGACAATATTGGAGT 16401 Query 18609 GGAAGATGAATTGCCAAACTACTGCTTCCCAATAAGCGGAATAGTTCCTGGCACCACCTC 18668 ||||| ||| | ||||| || ||||| || || ||| |||| | | Sbjct 16402 AGAAGACGAACTTCCAAATTATTGCTTTCCGTTATCTGGATGTTCTCCT---ATTGATTA 16458 Query 18669 TACTAGAGTCACCAGAAACGGTGGAAACTGGGAAGCCACGGCAAACAACGATCCGGCGTA 18728 |||| || | ||| || || | || | | ||||| | || ||| | Sbjct 16459 TACTGCTGTTAATCAAAATGG-----ACAAGCAATCAAT----AACAATAACCCTGCGCA 16509 Query 18729 TGTCAA------CAAAGGCAATTTAGACTGTATGGAAATAAACCTCGCGGCTAATCTGTG 18782 || |||||| ||| | || || |||||||| ||| | ||||| || ||||| Sbjct 16510 GGTTCTTATAGGCAAAGGAAATGTTGAATGCATGGAAATCAACATAGCGGCCAACCTGTG 16569 Query 18783 GCGCGGGTTCCTATATTCTAATGTTGCCCTGTACTTGCCAGACGACCTTAAGTTCACACC 18842 | || || ||||||||| | || ||||| |||| || || |||| ||| || Sbjct 16570 GAAGAATTTTCTGTATTCTAATATCGCGCTGTATCTGCCCGATAACTTTAAAACCACTCC 16629 Query 18843 GCCAAATGTCACACTTCCTAACAA-CACCAA-TACGTATGCATACATGAACGGTCGCGTT 18900 ||||||| | | || | | || | || ||||| |||||||| |||| || Sbjct 16630 CGCAAATGTGGTATTGCCGCAGGATCAGCGGCTA--TATGCTTACATGAATTCTCGCATT 16687 Query 18901 CCAGCGGCTGGGTTGGTTGACACTTACGTCAACATTGGCGCTCGGTGGTCGTTGGATGTG 18960 ||||| | || |||| || ||| ||||||| || | ||||||| | |||||| Sbjct 16688 CCAGCCGGGGGTCTGGTAGAGGATTATATCAACATAGGAACCAGGTGGTCAATAGATGTG 16747 Query 18961 ATGGATAACGTGAACCCATTCAACCATCACAGAAACGCGGGCCTGCGCTACCGCTCTCAA 19020 ||||| | || || ||||| || ||||||||||| | || || | ||| | ||||| Sbjct 16748 ATGGACACGGTTAATCCATTTAATCATCACAGAAATACTGGTTTGAGGTACAGGTCTCAG 16807 Query 19021 CTTCTAGGCAATGGCCGGTACTGTCATTTTCACATCCAAGTTCCGCAGAAGTTTTTCGCC 19080 || |||| ||||| || || | ||||| || || |||||||| |||||||| || Sbjct 16808 CTATTAGGAAATGGTCGCTATGCTTCCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCA 16867 Query 19081 ATCAAGAACCTTCTTCTGCTGCCTGGGACGTACACTTACGAATGGTCTTTCAGAAAAGAC 19140 | || | | |||||||| || || |||||| ||||||||||||||| |||||||| Sbjct 16868 CTTAAAAGTTTGCTTCTGCTACCGGGATCGTACAGTTACGAATGGTCTTTTAGAAAAGAT 16927 Query 19141 GTTAACATGGTTCTTCAGAGCACTCTTGGGAATGATCTGCGTGTGGACGGAGCCTCCATC 19200 || |||||| || | ||||| |||||||| ||||||||| | | ||||||||| || | Sbjct 16928 GTAAACATGATTTTGCAGAGTACTCTTGGCAATGATCTGAGGGAGGACGGAGCGTCAGTA 16987 Query 19201 ACAATTGAGAGCGTTAACCTGTATGCCAGCTTTTTCCCAATGGCACACAATACCGCATCC 19260 ||| |||| ||| ||| ||| | ||| | || || || ||| | || || || || || Sbjct 16988 ACATTTGACAGCATTAGCCTATTTGCTACTTTCTTTCCGATGTCTCATAACACTGCTTCT 17047 Query 19261 ACTCTTGAAGCCATGCTGCGCAATGACACAAACGACCAATCGTTCATCGACTACCTGTCT 19320 ||||| ||| | ||||| |||||||| ||||| || || ||| |||||| || || Sbjct 17048 ACTCTGGAAACTATGCTTCGCAATGAGGTTAACGATCAGTCCTTCGGCGACTATCTTTC- 17106 Query 19321 TCAGC--CAACATGTTGTATCCAATTCCTGCCAATGCCACTAACCTGCCAATTTCCATCC 19378 |||| |||||| | ||| | |||||| | || || | |||| || || || | Sbjct 17107 -CAGCGTTAACATGCTTTATGCTATTCCTCCGCATCAAACAACAGTGCCTATCTCTATTC 17165 Query 19379 CATCTCGCAACTGGGCCGCCTTCCGCGGATGGAGCTTCACCAGAATTAAGCAGAAAGAAA 19438 || | | || ||||| ||||| | || ||| || || ||| | || || | |||| Sbjct 17166 CAGCAAGGAATTGGGCGGCCTTTAGAGGTTGGGCATTTACTAGACTAAAACAACAGGAAA 17225 Query 19439 CACCCGCCTTGGGCTCTCCATTCGACCCCTACTTCACATACTCAGGCACTATACCATACT 19498 |||| || | |||||| |||| ||||| ||||| | ||||| ||| | || || || | Sbjct 17226 CACCAACCATTGGCTCTGCATTTGACCCATACTTTAGGTACTCGGGCTCAATCCCGTATT 17285 Query 19499 TGGACGGCACCTTTTATCTCAATCACACCTTCAGAAGGGTGTCTATACAGTTTGATTCGT 19558 ||| | ||||||||| | |||||| |||||| |||| | |||||||||||||| | Sbjct 17286 GGGATGCGACCTTTTATTTATCTCACACTATCAGAAAGGTGGCCATACAGTTTGATTCTT 17345 Query 19559 CGGTGCAGTGGCCGGGCAACGACCGCTTGCTCACACCAAATGAGTTTGAGATTAAAAGGC 19618 | || ||||| || || ||| | | | | ||| ||||| ||| | || ||||| Sbjct 17346 CAGTAAGTTGGCCTGGAAATGACAGACTTTTAATACCTAATGAATTTCACATAAAAAGAG 17405 Query 19619 TAGTGGATGGAGAGGGGTACAATGTAGCTCAGAGCAACATGACAAAGGACTGGTTTCTAG 19678 ||||| | || || || || ||||||||| || || ||||| |||| | | Sbjct 17406 AGGTGGACGCGGAAGGCTATAACACCTCTCAGAGCATAATTACTAAGGATTGGTATATGA 17465 Query 19679 TGCAGATGCTTGCAAATTACAACATTGGCTACCAGGGCTATCATCTCCCGGATGGCTATA 19738 | || ||||| || | ||||| || || ||||| || | ||| || || | |||| Sbjct 17466 TTCAAATGCTCGCTCACTACAATATCGGATACCAAGGTTTTCACCTACCCACAGATTATA 17525 Query 19739 AAGATCGCACATATTCTTTTCTGAGAAACTTTCAGCCAATGACTAGGCAGATAGTGGACC 19798 ||||| | ||||| ||| | ||||| ||| | || ||| ||| || | ||||| | Sbjct 17526 AAGATAGATTGTATTCCTTTTTAAGAAATTTTGAACCCATGTGTAGACAAGTTGTGGATC 17585 Query 19799 AAACTAACGTGCCCGCGTATCAGAATGTCCCAATCACCCACCAGCACAATAATTCTGGCT 19858 ||| | ||||| || | | | | ||||| |||||||| || | Sbjct 17586 CTGGTAAGACGGAAAAATATCAACCCGTTGCTCTTAAATATCAGCATAATAATTCAGGTT 17645 Query 19859 TT--ACTGGATT-TGCCAGTCCAGCGCTGCCGCGTGAGGGACACCCGTATCCAGCTAACT 19915 || | ||| || | || | || ||| | || || || ||||| ||||| Sbjct 17646 TTAAAAACCATTATG---GACC--CTTTG-GGCGACAAGGCCATCCTTATCCCTGTAACT 17699 Query 19916 GGCCGTATCCACTGATTAGCGCTACTGCAGTGGCCACGCAAACACAGCGAAAGTTCCTAT 19975 |||| | || || || | | |||| || || ||| |||| || ||| Sbjct 17700 GGCCTTTCCCGCTCATCGGAGAACAGGCAGGTAAAACCATTACTCAGAGAAAATTTTTAT 17759 Query 19976 GTGACAGGACGCTGTGGCGCATTCCATTCTCGTCCAACTTTATGTCTATGGGATCGCTTA 20035 ||||||| || |||||| | ||||| ||||| |||||||||||||| |||||| | || | Sbjct 17760 GTGACAGAACACTGTGGAGGATTCCGTTCTCCTCCAACTTTATGTCCATGGGAACACTAA 17819 Query 20036 CCGATCTGGGGCAGAACCTGCTGTATGCAAATGCTGCTCACGCCTTAGACATGACCTTTG 20095 | |||||||| || || |||| ||||||||| | ||||| || ||||||||||| | | Sbjct 17820 CAGATCTGGGACAAAATTTGCTATATGCAAATTCAGCTCATGCTTTAGACATGACAGTCG 17879 Query 20096 AAGTGGACGCGATGGACGAGCCCACGCTGCTTTATG-TTTTATTTGAAGTGTTTGACGTG 20154 |||| || | ||||| || || || | | ||| | |||||||||| |||||| || Sbjct 17880 AAGTAGATTCAATGGAGGAACCAAC-TTATCTCATGATGCTATTTGAAGTATTTGACATG 17938 Query 20155 GTTCGCGTTCACCAGCCTCACAGGGGAGTCATCGAAACTGTCTACCTCAGAACTCCATTC 20214 | || || |||||||| | || ||||| ||| | | || || ||||| || || Sbjct 17939 TGCAGAGTGCATCAGCCTCAACGAGGTGTCATAGAAGTTATTTATCTAAGAACCCCCTTT 17998 Query 20215 TCTGCCGGCAACGCCACTACATAAGCATGGGATCCAGGGAAGAGGAACTGCGCGCCATTG 20274 || || || |||||| | |||||| ||||| || || || ||| | ||| Sbjct 17999 TCGGCAGGTAACGCCGCAACATAAATATGGGGACCTCAGAGGACGAAATAAAACGAATTA 18058 Query 20275 TGCGCGACCTCGGAGTTGGGCCATACTTCCTGGGGACGTTCGACAAACGCTTTCCTGGTT 20334 | ||| | || || || | || |||| || | || ||||||||||| || | Sbjct 18059 TCTCCGA--TTTGA-ATGTACCTTGTTTTTTGGGTACCTATGATAAACGCTTTCCGGGGT 18115 Query 20335 TT---CTAAATAACTCAAAGCCGAGCTGCGCCATCGTGAATACCGCAGGTAGAGAAACAG 20391 || | ||| || | | |||| ||||| || || |||| | | ||| | Sbjct 18116 TTATCCGAAAGGAC---AGGTTATGCTGTGCCATTGTAAACACCGGGCTTCGCGAAGAGG 18172 Query 20392 GCGGCGCGCATTGGCTGGCCCTGGCTTGG-TTCCCTAAATCTAAGGCtttttactttttt 20450 |||| | |||||| | || | |||||| |||||| || ||| | |||||| | ||| Sbjct 18173 GCGGTGTCCATTGGATTGCGTTTGCTTGGAATCCCTATAT-TAAAACATTTTACATGTTT 18231 Query 20451 GATCCATTTGGATTC 20465 |||||||| |||||| Sbjct 18232 GATCCATTCGGATTC 18246 Score = 179 bits (198), Expect = 8e-41 Identities = 1667/2676 (62%), Gaps = 111/2676 (4%) Strand=Plus/Plus Query 4411 AATATGTCTTTTAGCAGGAGGGAAATTGGCAATGGCAGTCCTTTAGTGTATTGATTTATA 4470 || || ||||||| | |||| |||| || || || |||||||| || ||| ||| Sbjct 3676 AAGATATCTTTTAATAATAGGGTGATTGCTAAGGGTAGGCCTTTAGTATAAGTATTAATA 3735 Query 4471 AATCTATTAAGCTGTGAAGGCTGCATTTTAGGAGAGATGATGTGCAGCTTTGCTTGTATT 4530 ||||| || ||||| | || |||||||| || | || || || ||||| ||| Sbjct 3736 AATCTGTTTAGCTGAGCGGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAATT 3795 Query 4531 TTTAAATTTGATATGTTCCCAGCGTGATCTTTTCTGGGGTTCATATTGTGCAATACTACC 4590 |||| | ||||| || ||| |||||||| ||||||||||| || ||||| || Sbjct 3796 TTTAGTGTGGATATATTTCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCACA 3855 Query 4591 ATGACAGAGTAGCCTGTGCATTTTGGAAACTTATCATGTAGTTTAGATGGAAATGCGTGG 4650 | | | |||| || |||| ||| | || ||| |||||| || ||||| ||||| Sbjct 3856 AACAGATAGTACCCGCTGCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGTGA 3915 Query 4651 AAAAACTTTGAAATTCCTTTGTGGGCTCCCAGATCCTCCATACATTCGTCTAGTATTATA 4710 ||||| |||| ||| ||| |||| | || |||||||| || || | || || Sbjct 3916 AAAAATTTTGCAATAGGGCTGTTCCCTCCTAAATTTTCCATACACTCATCAATGATAATG 3975 Query 4711 GCGATTGGACC--TTTTGATGCCGCTTTAGCAAATATGTTTCTGGGGTCGCTCAGGTCAT 4768 || || || || ||||| ||||| | ||||| | || | || | | | |||| Sbjct 3976 GCTATGGGTCCGGTTTTG--GCCGCCTGTACAAATTTATTATTTGGATGCCCTAAATCAT 4033 Query 4769 AGTTGTATTCCTGCGTTAGGTCTGAATATGCCATTTTTATGAATTTTGGCATCAGCGAGC 4828 | || | ||| | || || || | | || |||| || | | | | Sbjct 4034 AATTTTCTTCGTTTAAGAGATCCTTGTACGATAGTTGCGCGAATCGAGGAGTTAATGTAC 4093 Query 4829 CACTCTGTGGAACTAAGGTCCCC-TGAGGCCCCATGCTGTAGTTGCCTTCACAGATCTGT 4887 || |||| || || || || || | |||||| | ||||| || || || ||| Sbjct 4094 CAGTCTGAGGCAC-AATTTCACCATTCTTTCCCATGTTATAGTTTCCCTCTATAATTTGT 4152 Query 4888 GTTTCCCAAGCACTTATCTCTTgggggggTATCATGTCAATTTGCGGCACTATAAAGAAA 4947 | || ||| | | || || || ||||| |||||||| | || || |||||| Sbjct 4153 GCTTTCCATGACATAATTTCCTGTGGGGGGATCATGTCTGCATAAGGGGTTACAAAGAAT 4212 Query 4948 ACAGTTTCTGGGGGCGGTGTGATTAACTGTGAGGAAATTATGTTCCTAAGAAGTTGGGAT 5007 | ||| || |||| || | | ||| | || || || | || || | | ||||||| Sbjct 4213 ATAGTCTCCGGGGCGGGATTTAATAATTTGGACGACATAAGATTTCTCAATAATTGGGAT 4272 Query 5008 TTGCCGCAGCCTGTGGGGCCGTAAACAACCCCTATGACAGGCTGCATCTGAAAATTAATA 5067 || || | || || || || || | ||||| || || || || | | | ||| | | Sbjct 4273 TTTCCACTACCAGTTGGACCATATATGACCCCAATCACCGGTTGAGTATCACCATTTAAA 4332 Query 5068 GACCTGCATGCCCCTTGCGGGTTCAAATAAGG-TACGCATTTATTAAGCAACTCCCTGAC 5126 | ||| || | |||||| | | |||||| || || | || Sbjct 4333 CTACCGCACAATCCATAT---TTCAAACATTTATTTTCATTTAATAT-CATTTTTTCAAC 4388 Query 5127 ACAAACATTTTCTTCAGCCAAATCTAAAAGTAAACTGTGTCCGGCTAATGACATCAGTTG 5186 ||||||| || || |||||| | ||| | | ||| || | || | |||| Sbjct 4389 TAGGGCATTTTCATCGGCTAAATCTTTTAATAAGTTTTCTCCAGCGAGAGAAAGAAGTTC 4448 Query 5187 CTGGAAAGAGGAGAACGTGTGAAGAGGTTTTAGGCCTTCAGCAAAAGGCATGCTTTTTAA 5246 | | | | || || | | || |||||||| || ||| ||| ||| ||||||| Sbjct 4449 GTTTAGACATGAAAAAGATTTTAGTGGTTTTAGACCCTCATGGAAATTCATATTTTTTAA 4508 Query 5247 GCTGTTGTGCAAGACGGTCAGTCTGTCCCATAGTTCATTTATATGTCCCACGGTAATGTC 5306 ||| | || || | || | |||||||||| | | ||| |||| |||||||| | Sbjct 4509 ACTGGTTTGTAAAGCTTCCAATTTGTCCCATAGATTAGTTACATGTTCCACGGTAGCTCC 4568 Query 5307 ATCCAGCATTTGTCGCCGTTTCTTGGATTTGGGTTGCTTTTGGAGTAGGGCATTAG-TCG 5365 |||||||| |||| || || |||||||| | | ||||| | || || | || || Sbjct 4569 ATCCAGCAAGGGTCGGTATTCCTGGGATTTGGATGGTTTTTGCAATAAGGTCTGAGCTCC 4628 Query 5366 ATGCTGGTCGAG---GTTTAC-GAGGGTTCTGTCCTTCCACGGCCTCACTGTCCGAGTCA 5421 | || ||| | || || | ||| ||||||| | || ||||| || | || | Sbjct 4629 AC-CTCGTCCACCCAGTATAAAGTGGGATCTGTCCAT----GGTCTCACCGTTCTGGTGA 4683 Query 5422 GAGTTGTCTCTGTCACTGTGAATGGAGCGGCGTTT--GCTTGGTTTGTCGCTAGAGTGCG 5479 | || | |||||||| ||||| ||| | ||| ||||| || | || || || Sbjct 4684 GGGTGGCTTCTGTCACAGTGAACGGAT--GAGTTCCGGCTTGCTTGGAAGCAAGTGTTTT 4741 Query 5480 CTTCAGGCTCATCCGGCTGGTCTGAAAGTGGTCTGAGCCGT--GCTGGCTGTCCGCTAGG 5537 ||| || |||| | | ||| ||| ||| |||| |||||| || | Sbjct 4742 CTTTAGAGTCATTCTGGACGTCGTAAATCTCTCTT--CCGTCTGCTGGCGAGATGCATAG 4799 Query 5538 TAGCACTGGGCGAGAGTATCATAAGATAGCTCAGTGGTTGCGTGCCCTTTAGCTCTTAGC 5597 || || | | ||||||||| || | || || |||| ||||| || |||| Sbjct 4800 TAACAAGCTCTTAAAATATCATAAGTGAGAGCTGTAGTGTCGTGACCTTTGGCCCTTAAT 4859 Query 5598 TTGCCTT----TCCCCACGTGACCGCAGTTAGGGCAGTGTATGCTTTTCAACGCATACAG 5653 || || | | | | |||| ||||| ||| ||| ||| | ||||||| Sbjct 4860 TTTCCGGAGGATGCTCTC-TGAC---AGTTATCGCACCATATTTCTTTTAGAGCATACAT 4915 Query 5654 CTTTGGCGCCAGGAATACAGATTCAGGACTGTATGCATCACTCTTGCATTTTTCGCACTG 5713 |||||| || | || ||||| | || ||||| || || |||||| Sbjct 4916 CTTTGGAGCTAAAAACACAGACTTTGGGGCATATGCGGGCTGATTACAGCGTTCGCATCT 4975 Query 5714 CGTTTCGCATTCTACTAGCCAGGTGATGCTTGGG-CA-GCTTGGGTCAAACACTAGACTT 5771 || || |||||||||| ||| || | | || || ||| ||||| | || | | Sbjct 4976 TGTCTCACATTCTACTAACCATGTTAAGGAAGGATCATGCTCA--TCAAAGATTAAATTA 5033 Query 5772 CCTCCAttttttttAATTCTATGTTTACCTTTTTCTTGCATTAGGCGATGTCCTTCTTCT 5831 | |||| ||||| |||||| |||||||| | ||| || | ||| ||| |||| Sbjct 5034 TTGCTGTTTTCTTTAAGTCTATGCTTACCTTTGGTCTCCATCAGTCTATGCCCTGTTTCT 5093 Query 5832 GTCACGAACAGGCTGTCGGTGTCACCGTACACGGACTTGA---TTGTGCGTTGTTCCATG 5888 |||||||||| ||||| || || ||||| | || || | || |||| || ||| | Sbjct 5094 GTCACGAACAAACTGTCAGTATCTCCGTAAATCGATTTTAAAATTCTGCG--GTCCCAAG 5151 Query 5889 GGCTTTCCCCTGTCGTCGCTGTACAGGAACTCGGCCCACTCCGCCACAAACACTCTTGTC 5948 | | | |||| || || || | || || ||||| || | || | | ||| Sbjct 5152 GTCGT-CCCCAATCTTCAGAATATAAAAATTCCGCCCATTCGGAAGTGAAAGCGCGGGTC 5210 Query 5949 CAAGCTAGCACAAAAGAAGCGATGTGAGAAGCGTACCGGTTGTTTTTGATAAGTAAAGAA 6008 || || || ||||| || ||||| || || | ||| ||||| || | || || ||| Sbjct 5211 CAGGCGAGAACAAATGACGCGATTTGGGATGGGTAGCGGTTATTATCTATTTGTGGGGAA 5270 Query 6009 TTTTGCTCGAGGGTGTGTAAACAAATGTCATCGTCATCGGTGTCCATGAATGTGATTGGC 6068 | | || | | || | || | || | || || | | || ||| ||||||||| Sbjct 5271 GTATTTTCTATCATTTGAAGGCATAGGTGAGAATCGTCAGATTGCAAGAAAGTGATTGGC 5330 Query 6069 TTGTAAGTGTAGGTCACGTGACCCGCCGTAGG-------TATAAAAGG-----GGCGGG- 6115 || | | || ||||||||| | | || |||||| | |||||| Sbjct 5331 TTAAACTTATATGTCACGTGATCTGTGTCAGAATTTGCATATAAAGTGTCTATGGCGGGA 5390 Query 6116 --GTCCTCGTC---------TTCCTCATTTGCTTCTG-GCTCG--ACGT---------GC 6152 | ||| | |||| ||| | || | || || |||| || Sbjct 5391 GGGGCCTTTTTAGTTGGCGGTTCCGCAT---CATCGGAGCGCGGTACGTCATCGCGAAGC 5447 Query 6153 GGTGCAGGTGGGTAGGCTACGGTAAATTCTGGCATAAGTTCAGCACTTAAGTTGTCGGTT 6212 | || |||| ||| |||| |||||||| |||| || |||| || || || Sbjct 5448 GAAGCCGGTGAGTAACAGGCGGTGAATTCTGGGATAACACGGGCGCTTAGATTATCTGTC 5507 Query 6213 TCAATGAAAGAAGAGGATTTGACA----CTGTAGGTGCCAGTGGCGATGTTTTTTGACAT 6268 || ||| || | | || | ||| || || ||| |||| |||| ||| || Sbjct 5508 TCTATGTAACAGGTGGCGCTTACAAAAGCTTTA----CCACTGGCTATGTCTTTCATGAT 5563 Query 6269 TTCTGATTCAAGCTGGTCAGAAAACACTAtttttttGTTATCGAGTTTAGTAGCAAAGCT 6328 || | || || || | ||||| ||||||||| ||||| | | || |||||| Sbjct 5564 GTCACTTGTAATTTGATCCGGAAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGA 5623 Query 6329 GCCGTACAGAGCATTTGACAACAGTTTGGCTATGCTGCGCAttgtttggtttttgttttt 6388 |||||||| || |||||||||||||| || ||||| ||| ||| ||| | |||||| Sbjct 5624 ACCGTACAGTGCGTTTGACAACAGTTTAGCGATGCTTCGCTGTGTGCTGTTGTGGTTTTT 5683 Query 6389 gtctgctttttctttgGCGGCTATGTTCAGCTGG--ACATATTCTTTAGCCACGCAACGC 6446 || || ||||| || ||||| || || ||| || |||||| | ||||||||| | Sbjct 5684 TTCCGCGGCCTCTTTTGCCGCTATATT-AG-TGGCTACGTATTCTCTTGCCACGCAATTC 5741 Query 6447 CATTCTGGAAATATTGTTGTTCTTTCATCTGGTAGTATGCGCACTTTCCAGCCTCTGTTG 6506 || | ||||| ||| || |||||||| | | | | ||||| |||| || Sbjct 5742 CACTGCTCAAATACTGTAACTCGCTCATCTGGGACCAACCTAATCTTCCATCCTCGATTA 5801 Query 6507 TGCAGGGTTATCATGTCTACTGATGTGGCAACCTCACCGCGGAGAGGCTCGTTTGTCCAG 6566 |||| || || || | || ||| || || || | | | || ||||||||| Sbjct 5802 TGCAAAGTAATGGCATCGATGGACGTGCATACTTCGCCTCTTAAATTTTCATTTGTCCAG 5861 Query 6567 CATAGCCTGCCTCCCTTCCTGGAGCAGAAGGGCGGGAGCTCGTCCAGGAAGAGTTCGTCT 6626 || || | || || || || || || || ||||| | | || | | | |||| | Sbjct 5862 CAAAGACGCCCGCCTTTTCTCGAACAAAATGGCGGTAAAACATCTAAGTATTCTTCGGCA 5921 Query 6627 GGAGGGTCGGCGTCCACTGTGAAGATACCTGGCAACAGCGTGTCATCGAAATAATCAATG 6686 || | ||| || || | | | || | || ||||| | || ||||| ||| Sbjct 5922 GGGGCGTCAGCATCAATTACAACAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAATT 5981 Query 6687 CGCGAACCATGCGCGCTCAACCTTCTGCTCCAGTCTGATGCAG---CAACTGCGCGCTCG 6743 ||| | || | | || || | ||||| || ||| | | || Sbjct 5982 TTGTCACC--GGTTGCAAAGCGTTTTGA---ATACTGATAGAGAGCCAAGTTTCTG-TCA 6035 Query 6744 AATGGGTTCAGCGGCTGCCCCGCTGGAAATGGATGAGTCAATGCGCTTGCATACATTCCA 6803 || || || || || | || || | ||||| || |||||||| ||||||||||| Sbjct 6036 AAGGGATTAAGTGGTGGGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCATACATTCCG 6095 Query 6804 CAGATGTCATACACATAAATAGGCTGTTCCAGTATGCCGATGTATGTGGGGTAGCAGCGT 6863 | || ||||| ||||||||||| | || | | || ||||| ||||||||||| ||| Sbjct 6096 GAAATATCATAAACATAAATAGGTTCCTCAAAAACACCTATGTAAGTGGGGTAGCACCGT 6155 Query 6864 CCCCCACGGATGCTTTGGCGAACGTAATCATACATCTCGTTTGACGGCGCAAGCAGGGTG 6923 ||||| | |||||||| | || ||||||| || |||| |||||| || || || || Sbjct 6156 CCCCCTCTGATGCTTTCTCTTACAAAATCATAAATGTCGTGTGACGGGGCCAGAAGAGTA 6215 Query 6924 TTTGAC--ATGTTGGAACGGTTAGGTTTGATTGAGCGATACAAAATTTGTTTGAAGATTG 6981 || ||| ||| || | | ||||| | | ||| | ||| || || |||| Sbjct 6216 TTCGACAAATGATGTTTTTCTAACTTTTGA--GTCTTAAACACCAGTTGCTTAAAAATTG 6273 Query 6982 CATGGGAGTTTGAGCTAATTGTTGGTCTTTGAAAAA 7017 || || ||||||||||||||||| | ||||||| Sbjct 6274 CAAAAGAATTTGAGCTAATTGTTGGACGCTGAAAAA 6309 Score = 134 bits (148), Expect = 3e-27 Identities = 254/371 (68%), Gaps = 2/371 (1%) Strand=Plus/Plus Query 17504 CGAAGATGGCGACTCCATCGATGATGCCCCAGTGGTCGTACATGCACATCGCCGGGCAGG 17563 |||||||||| ||||| |||||| | || || ||||| ||| | || ||||| || || | Sbjct 15309 CGAAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAG 15368 Query 17564 ATGCCTCAGAGTACCTGTCTCCCGGCCTGGTG-CAGTTCGCGCAGGCCACAGAGACCTAC 17622 |||| ||||| || | ||||| | | | ||| || || || || || || || ||| Sbjct 15369 ATGCTTCAGAATATTTATCTCCTG-CGTTGTGTCAATTTGCAAGCGCAACCGAAACGTAC 15427 Query 17623 TTTAAGCTGGGTAACAAGTTTAGAAACCCCACTGTGGCTCCAACGCATGACGTCACCACA 17682 ||| || | | || |||||||| || || || || || || || || || || || Sbjct 15428 TTTTCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACG 15487 Query 17683 GAGCGGTCACAGCGGCTGCAGCTGCGATTTGTTCCAGTTGACCGTGAAGACACGCAGTAC 17742 || | || ||| | || || | |||||||||||| || ||||| || ||||| Sbjct 15488 GAAAGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTAT 15547 Query 17743 ACTCACAAGACCAGATTTCAGTTGGCTGTGGGCGACAACCGAGTACTTGACATGGCGAGC 17802 ||| || || ||||||| | | || || || ||| || || | || ||| || Sbjct 15548 ACTTTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGT 15607 Query 17803 ACTTACTTTGACATCCGCGGTACTTTGGACAGAGGTCCAAGCTTTAAGCCATACAGCGGC 17862 | ||| ||||| || || | | ||||||||||| ||||| || ||||| ||| Sbjct 15608 AGTTATTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGC 15667 Query 17863 ACGGCATACAA 17873 || |||||||| Sbjct 15668 ACAGCATACAA 15678 Score = 89.7 bits (98), Expect = 1e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 8614 TATCACTCGTCGGTTTATATTCTGGATTTCCCTCAGGCCGGAGAACACCACAGGACCGCT 8673 |||||||| || ||||| ||||| ||||| || |||||| | || ||||| | Sbjct 7885 TATCACTCTCCGATTTATGTTCTGAATTTCTCTGTTCTGGGAGAATATTACCGGACCCGT 7944 Query 8674 CACTCGAAACCTGAAAGATATTTCGATAGAATCAATTTCAGAATCATTGGTGGCCACCTG 8733 |||| || |||||||||| ||| | |||||||||||| |||||| || ||||| Sbjct 7945 CACTTTGAATCTGAAAGATAATTCAACAGAATCAATTTCCATATCATTAATGTTAACCTG 8004 Query 8734 TCTTAGAATTTCTGTTACATCGCCGCTGTTTTCGTGATATGCTATTTCTGCCATAAATTG 8793 | ||| || ||| | | ||||| ||||| ||| ||| ||| || ||||| || Sbjct 8005 TTCTAGTATATCTTGAATGCCTCCGCTATTTTCTTGAAATGATATATCACTCATAAGCTG 8064 Query 8794 TTCTATTTCCTC 8805 |||| ||||| Sbjct 8065 ATCTAGGTCCTC 8076 Score = 86.0 bits (94), Expect = 1e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 24786 CTGAGAGCTAAAATATTCCCAACGTTGTACGCCATATTCCAGCAAAGCAGAGGTGGCGGA 24845 || ||| ||| ||||| ||||| ||||| || || || || ||| || | ||| | Sbjct 22149 CTAAGAAATAAGATATTTCCAACTTTGTATGCTATCTTTCAACAATGCCGCGGTAAAAAA 22208 Query 24846 -GTATCTCTAAAGATAAAGAACCGATCCTTAAGATCCCTCACAAAAAGCTGCCTTTACCA 24904 || ||||| |||| || || | |||||||| || || || ||||| ||||| || Sbjct 22209 TGTCAACCTAAAATTAAA-AATCGCACTTTAAGATCACTTACCAAGAGCTGTCTTTATCA 22267 Query 24905 CAAGCAGGAGAGTCAGCTGCAGAGAACCTTGGAAGACGCCGAGGCTCTACTCCAGAAGTA 24964 ||| | || ||||||||||| || |||||||||| ||||| ||||| | |||| Sbjct 22268 CAAAAACGAAGAACAGCTGCAGAGGACTCTGGAAGACGCAGAGGCGCTACTGAACAAGTG 22327 Query 24965 CTGT 24968 |||| Sbjct 22328 CTGT 22331 Score = 82.4 bits (90), Expect = 2e-11 Identities = 187/270 (69%), Gaps = 10/270 (4%) Strand=Plus/Plus Query 7947 ACTAGCATAAATGGCACCAGTTGTTTGCCAAAGCGCCCGTGCCAGGTGTAAGTCTCCACG 8006 || || | |||||| | | ||||||||||||| || |||||||| ||||| || | | Sbjct 7242 ACAAGTAAAAATGGAATTAATTGTTTGCCAAAGGCTCCATGCCAGGTATAAGTTTCAATG 7301 Query 8007 TCGTATGTGATGAACAGCCTTTGAATGTCAACGTAC-GAGCCTATTGGCTGAAATGGGAT 8065 || || ||||| | | | ||| | | || ||| ||||| || || ||| | || Sbjct 7302 TCATAAGTGATATAGACACGTTGTGTAT-GACTTACGGAGCCAATGGGAAAAAAAGATAT 7360 Query 8066 AAGTTCCCACCAGTCGGCAGATTTATG-ATTGACGTGGTGAAAGTAAAAATCACGCCTCC 8124 || ||||||||| || || | | ||| || |||||||| |||||||| | || | Sbjct 7361 TTTTTTCCACCAGTC-ACATGTTGAAGAATTTACATGGTGAAAATAAAAATCTCTTCTTC 7419 Query 8125 GCACAGAACAAGTGTGAGAATGTTTGT-AAAAGTCT-CCACAGAAATCACATTT-TTGCG 8181 || ||||| | || | ||||| | |||| || ||||| || |||||||| || Sbjct 7420 TGACTGAACATGAATGCG--TGTTTTTAAAAAAACTACCACAAAATTCACATTTATTAAT 7477 Query 8182 AGGGTGAAATTTCTTTTATTAAAAACACCT 8211 | || |||| ||| ||||||||||||| Sbjct 7478 ACTGT-CAATTGATTTAATTAAAAACACCT 7506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109185806475902