Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_001460.1
Length=34125
Score E
Sequences producing significant alignments: (Bits) Value
seq4931 486 4e-133
>seq4931
Length=27746
Score = 486 bits (538), Expect = 4e-133
Identities = 910/1326 (69%), Gaps = 11/1326 (1%)
Strand=Plus/Plus
Query 19170 CCCGGGGT-TGGTGGATACCTATGTCAATATCGGCGCTCGCTGGTCCCCAGATGTGATGG 19228
|| ||||| |||| || ||| |||| || || | | ||||| |||||||||||
Sbjct 16692 CCGGGGGTCTGGTAGAGGATTATATCAACATAGGAACCAGGTGGTCAATAGATGTGATGG 16751
Query 19229 ATAATGTAAACCCTTTTAACCACCACCGAAACGCAGGGTTGCGCTACAGATCCATGTTGC 19288
| | || || || ||||| || ||| |||| | || ||| | ||||| || | |
Sbjct 16752 ACACGGTTAATCCATTTAATCATCACAGAAATACTGGTTTGAGGTACAGGTCTCAGCTAT 16811
Query 19289 TAGGCAATGGGAGATTTGTTCCTTTTCACATTCAGGTGCCGCAAAAATTTTTTGCCATCA 19348
|||| ||||| | | || | | ||||| |||||||| |||||||| |||||||| | |
Sbjct 16812 TAGGAAATGGTCGCTATGCTTCCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCACTTA 16871
Query 19349 GAAATTTGTTGCTGTTGCCCGGTTCCTACACTTACGAATGGAACTTTAGAAAGGATGTAA 19408
|| |||| | ||| | || || || |||| |||||||||| |||||||| |||||||
Sbjct 16872 AAAGTTTGCTTCTGCTACCGGGATCGTACAGTTACGAATGGTCTTTTAGAAAAGATGTAA 16931
Query 19409 ACATGATTCTTCAGAGCACACTGGGAAATGATCTTCGGGTGGACGGAGCCAGCGTTCGCT 19468
|||||||| | ||||| || || || |||||||| ||| ||||||||| || |
Sbjct 16932 ACATGATTTTGCAGAGTACTCTTGGCAATGATCTGAGGGAGGACGGAGCGTCAGTAACAT 16991
Query 19469 TTGACAACATTGCCCTGTATGCTAACTTTTTTCCCATGGCACATAACACAGCTTCTACTT 19528
|||||| |||| ||| | ||||| || ||||| ||| | |||||||| |||||||||
Sbjct 16992 TTGACAGCATTAGCCTATTTGCTACTTTCTTTCCGATGTCTCATAACACTGCTTCTACTC 17051
Query 19529 TAGAAGCCATGTTAAGAAATGACACCAACGACCAGTCTTTTAACGATTATTTGTGTGCTG 19588
| ||| | ||| | | ||||| ||||| ||||| || ||| ||| | | |
Sbjct 17052 TGGAAACTATGCTTCGCAATGAGGTTAACGATCAGTCCTTCGGCGACTATCTTTCCAGCG 17111
Query 19589 CAAACATGCTGTATCCCATCCCAGCTAACGCCACCAGCGTGCCCATTTCAATACCTTCGC 19648
|||||||| ||| | || || | | || | ||||| || || || || |
Sbjct 17112 TTAACATGCTTTATGCTATTCCTCCGCATCAAACAACAGTGCCTATCTCTATTCCAGCAA 17171
Query 19649 GAAATTGGGCGGCATTTAGAGGCTGGAGCTTTACTCGCCTAAAAACTAAAGAAACTCCTT 19708
| ||||||||||| |||||||| ||| |||||| | |||||| | ||||| ||
Sbjct 17172 GGAATTGGGCGGCCTTTAGAGGTTGGGCATTTACTAGACTAAAACAACAGGAAACACCAA 17231
Query 19709 CCCTGGGTTCAGGGTTTGACCCCTACTTTGTATACTCTGGAACCATTCCCTATTTAGACG 19768
|| | || || | |||||||| |||||| ||||| || | || || |||| || |
Sbjct 17232 CCATTGGCTCTGCATTTGACCCATACTTTAGGTACTCGGGCTCAATCCCGTATTGGGATG 17291
Query 19769 GCACCTTTTACCTAAACCACACTTTTAAGAAGGTGTCAATCATGTTTGACTCCTCCGTGA 19828
|||||||| || |||||| | | |||||| | || |||||| || || || |
Sbjct 17292 CGACCTTTTATTTATCTCACACTATCAGAAAGGTGGCCATACAGTTTGATTCTTCAGTAA 17351
Query 19829 GTTGGCCTGGAAATGACCGTTTGCTAACCCCAAATGAATTTGAAATAAAGCGTTCTGTGG 19888
||||||||||||||||| | | ||| || ||||||||| | ||||| | ||||
Sbjct 17352 GTTGGCCTGGAAATGACAGACTTTTAATACCTAATGAATTTCACATAAAAAGAGAGGTGG 17411
Query 19889 ATGGGGAGGGATACAATGTGGCCCAATGCAATATGACTAAGGATTGGTTCCTAATACAAA 19948
| | ||| || || || | || ||| || ||||||||||||| | || ||||
Sbjct 17412 ACGCGGAAGGCTATAACACCTCTCAGAGCATAATTACTAAGGATTGGTATATGATTCAAA 17471
Query 19949 TGCTTAGTCATTACAACATTGGATACCAAGGTTTTTACAT-TCCAGAGAGCTACAAGGAC 20007
|||| ||| ||||| || ||||||||||||||| || | ||| ||| || || ||
Sbjct 17472 TGCTCGCTCACTACAATATCGGATACCAAGGTTTTCACCTACCCACAGA-TTATAAAGAT 17530
Query 20008 CGCATGTATTCTTTCTTTAGAAACTTTCAGCCCATGAGTAGGCAAGTTGTGGATACCACA 20067
| ||||||| || || ||||| ||| | |||||| |||| |||||||||||| ||
Sbjct 17531 AGATTGTATTCCTTTTTAAGAAATTTTGAACCCATGTGTAGACAAGTTGTGGAT-CCTGG 17589
Query 20068 GAATA-TAAGAACTACAAAAAAGTAACCGTAGAGTTTCAACATAACAACTCAGGATTCGT 20126
|| | | || || || || | | | | ||| ||||| || ||||| || |
Sbjct 17590 TAAGACGGAAAAATATCAACCCGTTGCTCTTAAATATCAGCATAATAATTCAGGTTT--T 17647
Query 20127 GGGATACCT--GGGCCCCACTATGCGGGAGGGACAAGCTTACCCCGCCAACTATCCCTAC 20184
| | | || ||| | ||| | || || |||| ||| |||| || | |
Sbjct 17648 AAAAACCATTATGGACCCTTTGGGCGACAAGGCCATCCTTATCCCTGTAACTGGCCTTTC 17707
Query 20185 CCTCTTATAGGCCAAACAGCTGTGGAAAGCATCACACAGAAAAAGTTTCTATGCGATCGT 20244
|| || || || || || | ||| ||| || |||| ||| ||| |||| || |
Sbjct 17708 CCGCTCATCGGAGAACAGGCAGGTAAAACCATTACTCAGAGAAAATTTTTATGTGACAGA 17767
Query 20245 GTTATGTGGCGCATCCCATTTTCTAGTAACTTCATGTCTATGGGGGCGCTAACGGATCTT 20304
||||| | || || || || ||||| ||||| ||||| | ||||| |||||
Sbjct 17768 ACACTGTGGAGGATTCCGTTCTCCTCCAACTTTATGTCCATGGGAACACTAACAGATCTG 17827
Query 20305 GGGCAAAATATGCTGTACGCAAACTCAGCCCATGCTCTAGACATGACATTTGAGGTGGAT 20364
|| |||||| |||| || ||||| ||||| |||||| ||||||||||| | || || |||
Sbjct 17828 GGACAAAATTTGCTATATGCAAATTCAGCTCATGCTTTAGACATGACAGTCGAAGTAGAT 17887
Query 20365 CCAATGGATGAGCCTACCCTTCTTTATG-TTTTATTTGAAGTTTTCGACGTGGTACGCAT 20423
||||||| || || || || | ||| | |||||||||| || ||| || | |
Sbjct 17888 TCAATGGAGGAACCAACTTATC-TCATGATGCTATTTGAAGTATTTGACATGTGCAGAGT 17946
Query 20424 TCACCAGCCACACCGCGGCGTCATTGAAGCGGTCTACCTGCGCACGCCCTTCTCGGCGGG 20483
|| ||||| || || || ||||| |||| | || || | || ||||| ||||| ||
Sbjct 17947 GCATCAGCCTCAACGAGGTGTCATAGAAGTTATTTATCTAAGAACCCCCTTTTCGGCAGG 18006
Query 20484 TAACGC 20489
||||||
Sbjct 18007 TAACGC 18012
Score = 170 bits (188), Expect = 4e-38
Identities = 463/701 (66%), Gaps = 12/701 (2%)
Strand=Plus/Plus
Query 4016 GGGTTAGTGTTGTAGATAATCCAGTCATAGCAACAACGCTGGGCATGGTGATTAAATATA 4075
||| | ||| |||| | ||||| ||||| | | | || ||||| ||| |||
Sbjct 3622 GGGGTGGTGGTGTACACGATCCAATCATAAGATGAGTGTAAGGAATGGTAGGCAAAGATA 3681
Query 4076 TCTTTTAACAACAAGCTAATTGCTAATGGAAGACCTTTAGTATAGGTATTGATAAAACGG 4135
|||||||| || | | | |||||||| || || ||||||||||| ||||| ||||| | |
Sbjct 3682 TCTTTTAATAATAGGGTGATTGCTAAGGGTAGGCCTTTAGTATAAGTATTAATAAATCTG 3741
Query 4136 TTAAGCTGGGTGGGATGCATCCGAGGTGACATGATATGAAGTTTTGATTGTATTTTGAGA 4195
|| ||||| | ||| ||||| || || |||||| ||| | ||| ||||| ||
Sbjct 3742 TTTAGCTGAGCGGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAATTTTTAGT 3801
Query 4196 TTGGCAATGTTACCTGCCAAATCTCTTCTTGGATTCATATTGTGGAGAACCACGAAAACG 4255
||| || || || |||||| ||| || |||||||| || | ||||| || |
Sbjct 3802 GTGGATATATTTCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCACAAACAGA 3861
Query 4256 GTGTAGCCAGTACACTTGGGAAATTTGTCATGGAGTTTAGAAGGAAAGGCATGGAAAAAC 4315
||| || | ||| |||| |||| ||| ||||| |||||||| || || |||||
Sbjct 3862 TAGTACCCGCTGCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGTGAAAAAAT 3921
Query 4316 TTGGAAACGCCTTTGTGACTTCCCAAATTTTCCATACACTCATCCATTATTATGGCAATT 4375
|| | || ||| | ||| |||||||||||||||||||| || || ||||| ||
Sbjct 3922 TTTGCAATAGGGCTGTTCCCTCCTAAATTTTCCATACACTCATCAATGATAATGGCTATG 3981
Query 4376 GGACCGCGAGCAGCGGCTTGAGCAAAAATGTTTTCTGGATCAGAAACATCATAGTTGTGG 4435
|| ||| || || || |||| | || | ||||| | |||||| || |
Sbjct 3982 GGTCCGGTTTTGGCCGCCTGTACAAATTTATTATTTGGATGCCCTAAATCATAATTTTCT 4041
Query 4436 TC--TAGAGTTAGGTCATCGTAGGACAACTTAACAAATTTAGGACACAGCGTTCCAGATT 4493
|| | || || || | ||| || | | | ||| |||| | || |||| |
Sbjct 4042 TCGTTTAAG--AGATCCTTGTACGATAGTTGCGCGAATCGAGGAGTTAATGTACCAGTCT 4099
Query 4494 GTGGAATAATAGTTCCC---TCTGGTCCTGGGACATAATTTCCCTCACAAATTTGCATTT 4550
| || | ||| ||| | ||| ||| | ||| |||||||| |||||| ||
Sbjct 4100 GAGGCACAAT--TTCACCATTCT-TTCCCATGTTATAGTTTCCCTCTATAATTTGTGCTT 4156
Query 4551 CCCAAGATTTAATTTCAGATGGGGGAATCATGTCCACTTGCGGAACAATaaaaaaaaCAG 4610
||| || ||||||| |||||| |||||||| | | || | ||| || | ||
Sbjct 4157 TCCATGACATAATTTCCTGTGGGGGGATCATGTCTGCATAAGGGGTTACAAAGAATATAG 4216
Query 4611 TTTCTGGAGCAGG-TGTAACCAGCTGGGCAGAAAGCAAATTACGCAACAACTGAGACTTC 4669
| || || || || | ||| | ||| | || | | ||| | ||| || || || ||
Sbjct 4217 TCTCCGGGGCGGGATTTAATAATTTGGAC-GACATAAGATTTCTCAATAATTGGGATTTT 4275
Query 4670 CCACAGCCAGTGGGTCCATAAATTACCCCAATTACAGGTTG 4710
|||| ||||| || ||||| || |||||||| || |||||
Sbjct 4276 CCACTACCAGTTGGACCATATATGACCCCAATCACCGGTTG 4316
Score = 165 bits (182), Expect = 2e-36
Identities = 216/299 (72%), Gaps = 0/299 (0%)
Strand=Plus/Plus
Query 18592 CAGCAAGCAGCGCCAAATAGAGCAAACTACATTGCATTCAGAGATAATTTTATTGGCCTG 18651
|||||| |||||||| || |||| || || | || || ||||| ||||| || |
Sbjct 16133 CAGCAAAGCGCGCCAAACAGGCCAAATTATATAGGTTTTAGGGATAACTTTATCGGGTTA 16192
Query 18652 ATGTATTACAACAGTACAGGCAACATGGGTGTATTGGCCGGGCAAGCTTCCCAACTTAAC 18711
|||| ||| ||||||| |||| |||||||||| ||||| ||| | || || |||||
Sbjct 16193 ATGTTTTATAACAGTAATAGCAATTTGGGTGTATTAGCCGGTCAATCGTCACAGCTTAAT 16252
Query 18712 GCAGTAGTAGACCTGCAAGACAGAAATACAGAGCTGTCATACCAGTTAATGCTGGATGCT 18771
|| || | ||||| ||||||||||||||||| ||||||| ||| | ||| | ||| |
Sbjct 16253 GCTGTCATCGACCTTCAAGACAGAAATACAGAATTGTCATATCAGCTTATGTTAGATAAT 16312
Query 18772 TTGGGAGACAGAACACGGTACTTTTCCTTGTGGAATTCCGCAGTGGACAGTTACGACCCT 18831
|| || ||||| || || | |||||||||| || ||||| || || ||
Sbjct 16313 TTACACGATAGAACTCGATATTACAGCTTGTGGAATCAAGCCGTGGATTCATATGATCCA 16372
Query 18832 GACGTTCGCGTTATTGAGAATCACGGGGTAGAGGATGAACTACCAAATTATTGCTTTCC 18890
|| || || | || || ||| || ||||| || ||||| |||||||||||||||||
Sbjct 16373 GAGGTCCGAATCATAGACAATATTGGAGTAGAAGACGAACTTCCAAATTATTGCTTTCC 16431
Score = 159 bits (176), Expect = 8e-35
Identities = 499/761 (66%), Gaps = 29/761 (4%)
Strand=Plus/Plus
Query 5962 ATTTGATCAGAAAAAACTAtttttttGTTATCTAGTTTGGTAGCAAAAGATCCGTACAAG 6021
|||||||| | ||| | ||||||||| ||||||| |||| ||||| || |||||||
Sbjct 5574 ATTTGATCCGGAAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGAACCGTACAGT 5633
Query 6022 GCATTGGAAAGCAGCTTGGCTATAGATCTTAGGGTT------TGATTTTTGTCCCTATCG 6075
|| || || | ||| || || || || | || || ||||| ||| ||
Sbjct 5634 GCGTTTGACAACAGTTTAGCGATGCTTCGCTGTGTGCTGTTGTGGTTTTTTTCCG---CG 5690
Query 6076 GCCCGTTCTTTTGCGGCAATATTGAGTTGC-ACATATTCGCGTGCCAGGCATTTCCAGGT 6134
||| |||||||| || ||||| ||| || || ||||| | ||||| ||| ||||| |
Sbjct 5691 GCC---TCTTTTGCCGCTATATT-AGTGGCTACGTATTCTCTTGCCACGCAATTCCAC-T 5745
Query 6135 GGGGAAA-ATGGTGGTGCGCTCGTCAGATAGCAAGCGTAAGCG-CCACCCGCGATTATGC 6192
| ||| | || ||||| || | | ||| | ||| | ||| || |||||||||
Sbjct 5746 GCTCAAATACTGTAACTCGCTCATCTGGGACCAACC-TAATCTTCCATCCTCGATTATGC 5804
Query 6193 AGTGTAACCAGATCTACGCTGGTAACTACTTCACCGCGCAAGCTTTCATTGGTCCAGGCT 6252
| |||| ||| | | || |||||| || | || ||||||| ||||||
Sbjct 5805 AAAGTAATGGCATCGATGGACGTGCATACTTCGCCTCTTAAATTTTCATTTGTCCAGCAA 5864
Query 6253 AAACGACCGCCTTTTCTAGAACAAAAAGGAGGAAGAACATCCAACTGATTTTCATCTGGG 6312
| ||| ||||||||||| |||||||| || || | |||||| || | | ||| | |||
Sbjct 5865 AGACGCCCGCCTTTTCTCGAACAAAATGGCGGTAAAACATCTAAGTATTCTTCGGCAGGG 5924
Query 6313 GGGTCGGCATCTATAGTAAAAATGCCAGGACAAAGATTTTTGTCAAAATAATCAATTTTG 6372
| ||| ||||| || || |||| | || | || ||||||||| |||||||
Sbjct 5925 GCGTCAGCATCAATTACAACAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAATTTTG 5984
Query 6373 CAAGTGTAATTTTCCAGCGCCACCTG-CCATTGCCGCACGGCCAATGCCCGCTCATAGGG 6431
| | || || || || | || | ||||| | ||| ||||
Sbjct 5985 TCACCG----GTTGCAAAGCGTTTTGAATACTGATAGAGAGCCAAGTTTCTGTCAAAGGG 6040
Query 6432 GTTAAGGGGAGGACCCCAAGGCATGGGGTGTGTGAGGGCCGATGCATACATGCCGCAAAT 6491
||||| || || || | |||||||| || || | || |||||||| ||| ||||
Sbjct 6041 ATTAAGTGGTGGGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCATACATTCCGGAAAT 6100
Query 6492 ATCATATACATATATGGGCTCTTTTAGTACTCCTATGTAAGTAGGATAGCACCTGCCGCC 6551
|||||| ||||| || || || | | || ||||||||||| || ||||||| || ||
Sbjct 6101 ATCATAAACATAAATAGGTTCCTCAAAAACACCTATGTAAGTGGGGTAGCACCGTCCCCC 6160
Query 6552 ACGAATGCTGGCGCGAACGTAGTCATATAGCTCATGTGAAGGCGCCAGGA---TGTTGGG 6608
| ||||| | | || | ||||| | || ||||| || ||||| | | || |
Sbjct 6161 TCTGATGCTTTCTCTTACAAAATCATAAATGTCGTGTGACGGGGCCAGAAGAGTATTCGA 6220
Query 6609 CCCAAGATGTGTGCGCTGTGGTTTTTCGGCGCGGTACAAAATTTGTCTGAAAATTGCATG 6668
| | ||||| | | | |||| | ||| | ||| | |||||||||
Sbjct 6221 CAAATGATGTTT---TTCTAACTTTTGAGTCTTAAACACCAGTTGCTTAAAAATTGCAAA 6277
Query 6669 AGAGTTAGAGGAAATGGTAGGACGCTGAAACACATTAAAAT 6709
||| || ||| ||| || ||||||||||| ||||||||||
Sbjct 6278 AGAATTTGAGCTAATTGTTGGACGCTGAAAAACATTAAAAT 6318
Score = 113 bits (124), Expect = 1e-20
Identities = 472/731 (65%), Gaps = 33/731 (5%)
Strand=Plus/Plus
Query 13505 CCTACGGAGGGAAGAAACAGTATCCGTTACTCGGAATTGTCACCGTTGTACGATACCACT 13564
|| || ||||||||||| || || ||| || || | |||| ||||||| ||
Sbjct 12040 CCGACTGAGGGAAGAAATAGCATAGTTTATTCACCTTTACCTACGTTACACGATACAACG 12099
Query 13565 CGAGTGTACTTGGTGGACAACAAGTCTTCTGACATTGCTTCATTGAATTACCAGAATGAT 13624
| | ||||| | || ||||| | || ||||| |||| | ||||| ||||| |||
Sbjct 12100 AAAATTTACTTTATCGATAACAAAGCATCCGACATCTCTTCCCTAAATTATCAGAACGAT 12159
Query 13625 CACAGCAACTTTTTAACCACTGTAGTGCAAAATAATGACTAT--TCCCCTATAGAGGCTG 13682
|| || | |||||| | || | |||||| || | | |||||| || |
Sbjct 12160 CATAGTTTATATTTAACATCCGTCATTCAAAATCCGGATTTTAATCCCCT-----GGAAG 12214
Query 13683 GCACGCAAACT---ATTAACTTTGATGAAAGGTCTAGATGGGGTGGAGATTTAAAAACCA 13739
||||| | | || || || |||||||| |||||||||||||| ||||||||||||
Sbjct 12215 GCACGGGACATCAGATAAAATTAGATGAAAGATCTAGATGGGGTGGTAATTTAAAAACCA 12274
Query 13740 TCTTACATACCAACATGCCAAACGTGAACGATTTTATGTTTACCACCAAATTTAAGGCCA 13799
| | ||| | ||||| ||||| | | ||| | ||||||| | ||| |
Sbjct 12275 TTCTGCATTCAAACATACCAAATATAACCGAGTACATGTTTAGTAATTCTTTT------A 12328
Query 13800 GGGTAATGGTGGCTAGGAAAACAAACAACGAAGGCCAAACCATTTTAGAATATGAGTGGG 13859
| || | | | | | ||| | ||| || ||||| || |||||| ||||
Sbjct 12329 GAGTTAAGATACCCACTCAAAAAGTTGACG--GG------CATTTAAG-ATATGAATGGG 12379
Query 13860 CAGAATTTGTGC-TACCCGAGGGTAACTATTCGGAAACCATGACTATTGACTTAATGAAC 13918
|| | | | ||||||| || || | |||||| | ||| ||| || || ||||||
Sbjct 12380 -TGACTCTAACCATACCCGAAGGAAATTTTTCGGAGATTATGGTTATAGATTTGATGAAC 12438
Query 13919 AATGCTATTATTGAGCATTATTTG-CGAGTAGGAAGACAGCATGGAGTGCTGGAAAGTGA 13977
|||| ||||| ||||||||| | | | || || | || || ||| |||
Sbjct 12439 GATGCCATTATCTCTCATTATTTGTCTAAT-GGCAGGTTACGCGGTGTTAATGAAGATGA 12497
Query 13978 CATTGGAGTTAAGTTTGACACCAGAAACTTTCGTCTGGGTTGGGACCCCGAAACCCAATT 14037
|| || |||||| | ||||| ||||| ||| |||||| || ||| | | ||
Sbjct 12498 AATAGGTGTTAAGCTGGACACTAGAAATTTTAAAATGGGTTATGATCCCTATTATAAGTT 12557
Query 14038 AGTAACTCCGGGAGTGTACACTA-ATGAGGCTTTTCATCCAGATATAGTACTGCTTCCAG 14096
| | | || || |||| ||| |||| || |||||||| || | | | ||||
Sbjct 12558 AATCATGCCCGGCATGTA-TCTATATGAAGCATTTCATCCCGACGTGATCTTAAGTCCAC 12616
Query 14097 GTTGCGGGGTTGATTTTACAGAGAGCAGATTAAGCAACATACTAGGTATAAGAAAGAGGC 14156
|| | ||||||||| | || ||||||| || || | ||||||||||| ||
Sbjct 12617 ACTGTGCTATTGATTTTAGCAAAAGTAGATTAAATAATCTATTGGGTATAAGAAAAAGAT 12676
Query 14157 AGCCGTTTCAGGAAGGA-TTTGTGATTATGTATGAACACTTAGAGGGAGGCAATATTCCA 14215
|| | ||| |||||| ||| | || | ||||| | |||| || || ||||||||
Sbjct 12677 TACCATATCA-GAAGGATTTTATTATCACTTATGATGATTTAGTAGGGGGAAATATTCCC 12735
Query 14216 GCTCTTTTGGA 14226
||||| || ||
Sbjct 12736 GCTCTATTAGA 12746
Score = 107 bits (118), Expect = 4e-19
Identities = 217/321 (68%), Gaps = 1/321 (0%)
Strand=Plus/Plus
Query 17728 AGCGCTTTC-AAGATGGCCACTCCCTCGATGATGCCGCAGTGGTCTTACATGCACATCGC 17786
|||||| | ||||||||||||||||||||| | ||||| ||||||||| | || |||||
Sbjct 15301 AGCGCTCCCGAAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGC 15360
Query 17787 CGGTCAGGATGCCTCGGAGTACCTGAGTCCCGGTCTGGTGCAATTCGCCCGCGCCACGGA 17846
|| || ||||| || || || | ||| | || ||||| || |||| || ||
Sbjct 15361 AGGACAAGATGCTTCAGAATATTTATCTCCTGCGTTGTGTCAATTTGCAAGCGCAACCGA 15420
Query 17847 CACCTACTTCACCCTGGGAAACAAGTTTAGAAACCCCACCGTGGCTCCCACCCATGATGT 17906
|| ||||| |||| | | || |||||||| || || || || || || || |||||
Sbjct 15421 AACGTACTTTTCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGT 15480
Query 17907 TACCACCGATCGCTCGCAGCGTCTGACGCTGCGTTTTGTGCCCGTGGATCGGGAAGATAC 17966
|| || || | |||||| | || | | ||||| || | ||| ||||||||
Sbjct 15481 AACTACGGAAAGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATAC 15540
Query 17967 TACCTACTCCTACAAGGCTCGCTTTACGCTGGCTGTGGGTGACAACCGCGTGTTAGACAT 18026
|| | | || || || ||| || | || ||||| ||| | | ||||| |
Sbjct 15541 ACAGTATACTTTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTT 15600
Query 18027 GGCTAGTTCTTACTTTGACAT 18047
|| |||| ||| ||||| ||
Sbjct 15601 GGGTAGTAGTTATTTTGATAT 15621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 108993955115942
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