Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_001460.1 Length=34125 Score E Sequences producing significant alignments: (Bits) Value seq4931 486 4e-133 >seq4931 Length=27746 Score = 486 bits (538), Expect = 4e-133 Identities = 910/1326 (69%), Gaps = 11/1326 (1%) Strand=Plus/Plus Query 19170 CCCGGGGT-TGGTGGATACCTATGTCAATATCGGCGCTCGCTGGTCCCCAGATGTGATGG 19228 || ||||| |||| || ||| |||| || || | | ||||| ||||||||||| Sbjct 16692 CCGGGGGTCTGGTAGAGGATTATATCAACATAGGAACCAGGTGGTCAATAGATGTGATGG 16751 Query 19229 ATAATGTAAACCCTTTTAACCACCACCGAAACGCAGGGTTGCGCTACAGATCCATGTTGC 19288 | | || || || ||||| || ||| |||| | || ||| | ||||| || | | Sbjct 16752 ACACGGTTAATCCATTTAATCATCACAGAAATACTGGTTTGAGGTACAGGTCTCAGCTAT 16811 Query 19289 TAGGCAATGGGAGATTTGTTCCTTTTCACATTCAGGTGCCGCAAAAATTTTTTGCCATCA 19348 |||| ||||| | | || | | ||||| |||||||| |||||||| |||||||| | | Sbjct 16812 TAGGAAATGGTCGCTATGCTTCCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCACTTA 16871 Query 19349 GAAATTTGTTGCTGTTGCCCGGTTCCTACACTTACGAATGGAACTTTAGAAAGGATGTAA 19408 || |||| | ||| | || || || |||| |||||||||| |||||||| ||||||| Sbjct 16872 AAAGTTTGCTTCTGCTACCGGGATCGTACAGTTACGAATGGTCTTTTAGAAAAGATGTAA 16931 Query 19409 ACATGATTCTTCAGAGCACACTGGGAAATGATCTTCGGGTGGACGGAGCCAGCGTTCGCT 19468 |||||||| | ||||| || || || |||||||| ||| ||||||||| || | Sbjct 16932 ACATGATTTTGCAGAGTACTCTTGGCAATGATCTGAGGGAGGACGGAGCGTCAGTAACAT 16991 Query 19469 TTGACAACATTGCCCTGTATGCTAACTTTTTTCCCATGGCACATAACACAGCTTCTACTT 19528 |||||| |||| ||| | ||||| || ||||| ||| | |||||||| ||||||||| Sbjct 16992 TTGACAGCATTAGCCTATTTGCTACTTTCTTTCCGATGTCTCATAACACTGCTTCTACTC 17051 Query 19529 TAGAAGCCATGTTAAGAAATGACACCAACGACCAGTCTTTTAACGATTATTTGTGTGCTG 19588 | ||| | ||| | | ||||| ||||| ||||| || ||| ||| | | | Sbjct 17052 TGGAAACTATGCTTCGCAATGAGGTTAACGATCAGTCCTTCGGCGACTATCTTTCCAGCG 17111 Query 19589 CAAACATGCTGTATCCCATCCCAGCTAACGCCACCAGCGTGCCCATTTCAATACCTTCGC 19648 |||||||| ||| | || || | | || | ||||| || || || || | Sbjct 17112 TTAACATGCTTTATGCTATTCCTCCGCATCAAACAACAGTGCCTATCTCTATTCCAGCAA 17171 Query 19649 GAAATTGGGCGGCATTTAGAGGCTGGAGCTTTACTCGCCTAAAAACTAAAGAAACTCCTT 19708 | ||||||||||| |||||||| ||| |||||| | |||||| | ||||| || Sbjct 17172 GGAATTGGGCGGCCTTTAGAGGTTGGGCATTTACTAGACTAAAACAACAGGAAACACCAA 17231 Query 19709 CCCTGGGTTCAGGGTTTGACCCCTACTTTGTATACTCTGGAACCATTCCCTATTTAGACG 19768 || | || || | |||||||| |||||| ||||| || | || || |||| || | Sbjct 17232 CCATTGGCTCTGCATTTGACCCATACTTTAGGTACTCGGGCTCAATCCCGTATTGGGATG 17291 Query 19769 GCACCTTTTACCTAAACCACACTTTTAAGAAGGTGTCAATCATGTTTGACTCCTCCGTGA 19828 |||||||| || |||||| | | |||||| | || |||||| || || || | Sbjct 17292 CGACCTTTTATTTATCTCACACTATCAGAAAGGTGGCCATACAGTTTGATTCTTCAGTAA 17351 Query 19829 GTTGGCCTGGAAATGACCGTTTGCTAACCCCAAATGAATTTGAAATAAAGCGTTCTGTGG 19888 ||||||||||||||||| | | ||| || ||||||||| | ||||| | |||| Sbjct 17352 GTTGGCCTGGAAATGACAGACTTTTAATACCTAATGAATTTCACATAAAAAGAGAGGTGG 17411 Query 19889 ATGGGGAGGGATACAATGTGGCCCAATGCAATATGACTAAGGATTGGTTCCTAATACAAA 19948 | | ||| || || || | || ||| || ||||||||||||| | || |||| Sbjct 17412 ACGCGGAAGGCTATAACACCTCTCAGAGCATAATTACTAAGGATTGGTATATGATTCAAA 17471 Query 19949 TGCTTAGTCATTACAACATTGGATACCAAGGTTTTTACAT-TCCAGAGAGCTACAAGGAC 20007 |||| ||| ||||| || ||||||||||||||| || | ||| ||| || || || Sbjct 17472 TGCTCGCTCACTACAATATCGGATACCAAGGTTTTCACCTACCCACAGA-TTATAAAGAT 17530 Query 20008 CGCATGTATTCTTTCTTTAGAAACTTTCAGCCCATGAGTAGGCAAGTTGTGGATACCACA 20067 | ||||||| || || ||||| ||| | |||||| |||| |||||||||||| || Sbjct 17531 AGATTGTATTCCTTTTTAAGAAATTTTGAACCCATGTGTAGACAAGTTGTGGAT-CCTGG 17589 Query 20068 GAATA-TAAGAACTACAAAAAAGTAACCGTAGAGTTTCAACATAACAACTCAGGATTCGT 20126 || | | || || || || | | | | ||| ||||| || ||||| || | Sbjct 17590 TAAGACGGAAAAATATCAACCCGTTGCTCTTAAATATCAGCATAATAATTCAGGTTT--T 17647 Query 20127 GGGATACCT--GGGCCCCACTATGCGGGAGGGACAAGCTTACCCCGCCAACTATCCCTAC 20184 | | | || ||| | ||| | || || |||| ||| |||| || | | Sbjct 17648 AAAAACCATTATGGACCCTTTGGGCGACAAGGCCATCCTTATCCCTGTAACTGGCCTTTC 17707 Query 20185 CCTCTTATAGGCCAAACAGCTGTGGAAAGCATCACACAGAAAAAGTTTCTATGCGATCGT 20244 || || || || || || | ||| ||| || |||| ||| ||| |||| || | Sbjct 17708 CCGCTCATCGGAGAACAGGCAGGTAAAACCATTACTCAGAGAAAATTTTTATGTGACAGA 17767 Query 20245 GTTATGTGGCGCATCCCATTTTCTAGTAACTTCATGTCTATGGGGGCGCTAACGGATCTT 20304 ||||| | || || || || ||||| ||||| ||||| | ||||| ||||| Sbjct 17768 ACACTGTGGAGGATTCCGTTCTCCTCCAACTTTATGTCCATGGGAACACTAACAGATCTG 17827 Query 20305 GGGCAAAATATGCTGTACGCAAACTCAGCCCATGCTCTAGACATGACATTTGAGGTGGAT 20364 || |||||| |||| || ||||| ||||| |||||| ||||||||||| | || || ||| Sbjct 17828 GGACAAAATTTGCTATATGCAAATTCAGCTCATGCTTTAGACATGACAGTCGAAGTAGAT 17887 Query 20365 CCAATGGATGAGCCTACCCTTCTTTATG-TTTTATTTGAAGTTTTCGACGTGGTACGCAT 20423 ||||||| || || || || | ||| | |||||||||| || ||| || | | Sbjct 17888 TCAATGGAGGAACCAACTTATC-TCATGATGCTATTTGAAGTATTTGACATGTGCAGAGT 17946 Query 20424 TCACCAGCCACACCGCGGCGTCATTGAAGCGGTCTACCTGCGCACGCCCTTCTCGGCGGG 20483 || ||||| || || || ||||| |||| | || || | || ||||| ||||| || Sbjct 17947 GCATCAGCCTCAACGAGGTGTCATAGAAGTTATTTATCTAAGAACCCCCTTTTCGGCAGG 18006 Query 20484 TAACGC 20489 |||||| Sbjct 18007 TAACGC 18012 Score = 170 bits (188), Expect = 4e-38 Identities = 463/701 (66%), Gaps = 12/701 (2%) Strand=Plus/Plus Query 4016 GGGTTAGTGTTGTAGATAATCCAGTCATAGCAACAACGCTGGGCATGGTGATTAAATATA 4075 ||| | ||| |||| | ||||| ||||| | | | || ||||| ||| ||| Sbjct 3622 GGGGTGGTGGTGTACACGATCCAATCATAAGATGAGTGTAAGGAATGGTAGGCAAAGATA 3681 Query 4076 TCTTTTAACAACAAGCTAATTGCTAATGGAAGACCTTTAGTATAGGTATTGATAAAACGG 4135 |||||||| || | | | |||||||| || || ||||||||||| ||||| ||||| | | Sbjct 3682 TCTTTTAATAATAGGGTGATTGCTAAGGGTAGGCCTTTAGTATAAGTATTAATAAATCTG 3741 Query 4136 TTAAGCTGGGTGGGATGCATCCGAGGTGACATGATATGAAGTTTTGATTGTATTTTGAGA 4195 || ||||| | ||| ||||| || || |||||| ||| | ||| ||||| || Sbjct 3742 TTTAGCTGAGCGGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAATTTTTAGT 3801 Query 4196 TTGGCAATGTTACCTGCCAAATCTCTTCTTGGATTCATATTGTGGAGAACCACGAAAACG 4255 ||| || || || |||||| ||| || |||||||| || | ||||| || | Sbjct 3802 GTGGATATATTTCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCACAAACAGA 3861 Query 4256 GTGTAGCCAGTACACTTGGGAAATTTGTCATGGAGTTTAGAAGGAAAGGCATGGAAAAAC 4315 ||| || | ||| |||| |||| ||| ||||| |||||||| || || ||||| Sbjct 3862 TAGTACCCGCTGCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGTGAAAAAAT 3921 Query 4316 TTGGAAACGCCTTTGTGACTTCCCAAATTTTCCATACACTCATCCATTATTATGGCAATT 4375 || | || ||| | ||| |||||||||||||||||||| || || ||||| || Sbjct 3922 TTTGCAATAGGGCTGTTCCCTCCTAAATTTTCCATACACTCATCAATGATAATGGCTATG 3981 Query 4376 GGACCGCGAGCAGCGGCTTGAGCAAAAATGTTTTCTGGATCAGAAACATCATAGTTGTGG 4435 || ||| || || || |||| | || | ||||| | |||||| || | Sbjct 3982 GGTCCGGTTTTGGCCGCCTGTACAAATTTATTATTTGGATGCCCTAAATCATAATTTTCT 4041 Query 4436 TC--TAGAGTTAGGTCATCGTAGGACAACTTAACAAATTTAGGACACAGCGTTCCAGATT 4493 || | || || || | ||| || | | | ||| |||| | || |||| | Sbjct 4042 TCGTTTAAG--AGATCCTTGTACGATAGTTGCGCGAATCGAGGAGTTAATGTACCAGTCT 4099 Query 4494 GTGGAATAATAGTTCCC---TCTGGTCCTGGGACATAATTTCCCTCACAAATTTGCATTT 4550 | || | ||| ||| | ||| ||| | ||| |||||||| |||||| || Sbjct 4100 GAGGCACAAT--TTCACCATTCT-TTCCCATGTTATAGTTTCCCTCTATAATTTGTGCTT 4156 Query 4551 CCCAAGATTTAATTTCAGATGGGGGAATCATGTCCACTTGCGGAACAATaaaaaaaaCAG 4610 ||| || ||||||| |||||| |||||||| | | || | ||| || | || Sbjct 4157 TCCATGACATAATTTCCTGTGGGGGGATCATGTCTGCATAAGGGGTTACAAAGAATATAG 4216 Query 4611 TTTCTGGAGCAGG-TGTAACCAGCTGGGCAGAAAGCAAATTACGCAACAACTGAGACTTC 4669 | || || || || | ||| | ||| | || | | ||| | ||| || || || || Sbjct 4217 TCTCCGGGGCGGGATTTAATAATTTGGAC-GACATAAGATTTCTCAATAATTGGGATTTT 4275 Query 4670 CCACAGCCAGTGGGTCCATAAATTACCCCAATTACAGGTTG 4710 |||| ||||| || ||||| || |||||||| || ||||| Sbjct 4276 CCACTACCAGTTGGACCATATATGACCCCAATCACCGGTTG 4316 Score = 165 bits (182), Expect = 2e-36 Identities = 216/299 (72%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 18592 CAGCAAGCAGCGCCAAATAGAGCAAACTACATTGCATTCAGAGATAATTTTATTGGCCTG 18651 |||||| |||||||| || |||| || || | || || ||||| ||||| || | Sbjct 16133 CAGCAAAGCGCGCCAAACAGGCCAAATTATATAGGTTTTAGGGATAACTTTATCGGGTTA 16192 Query 18652 ATGTATTACAACAGTACAGGCAACATGGGTGTATTGGCCGGGCAAGCTTCCCAACTTAAC 18711 |||| ||| ||||||| |||| |||||||||| ||||| ||| | || || ||||| Sbjct 16193 ATGTTTTATAACAGTAATAGCAATTTGGGTGTATTAGCCGGTCAATCGTCACAGCTTAAT 16252 Query 18712 GCAGTAGTAGACCTGCAAGACAGAAATACAGAGCTGTCATACCAGTTAATGCTGGATGCT 18771 || || | ||||| ||||||||||||||||| ||||||| ||| | ||| | ||| | Sbjct 16253 GCTGTCATCGACCTTCAAGACAGAAATACAGAATTGTCATATCAGCTTATGTTAGATAAT 16312 Query 18772 TTGGGAGACAGAACACGGTACTTTTCCTTGTGGAATTCCGCAGTGGACAGTTACGACCCT 18831 || || ||||| || || | |||||||||| || ||||| || || || Sbjct 16313 TTACACGATAGAACTCGATATTACAGCTTGTGGAATCAAGCCGTGGATTCATATGATCCA 16372 Query 18832 GACGTTCGCGTTATTGAGAATCACGGGGTAGAGGATGAACTACCAAATTATTGCTTTCC 18890 || || || | || || ||| || ||||| || ||||| ||||||||||||||||| Sbjct 16373 GAGGTCCGAATCATAGACAATATTGGAGTAGAAGACGAACTTCCAAATTATTGCTTTCC 16431 Score = 159 bits (176), Expect = 8e-35 Identities = 499/761 (66%), Gaps = 29/761 (4%) Strand=Plus/Plus Query 5962 ATTTGATCAGAAAAAACTAtttttttGTTATCTAGTTTGGTAGCAAAAGATCCGTACAAG 6021 |||||||| | ||| | ||||||||| ||||||| |||| ||||| || ||||||| Sbjct 5574 ATTTGATCCGGAAACAGTATTTTTTTATTATCTAACCTGGTGGCAAAGGAACCGTACAGT 5633 Query 6022 GCATTGGAAAGCAGCTTGGCTATAGATCTTAGGGTT------TGATTTTTGTCCCTATCG 6075 || || || | ||| || || || || | || || ||||| ||| || Sbjct 5634 GCGTTTGACAACAGTTTAGCGATGCTTCGCTGTGTGCTGTTGTGGTTTTTTTCCG---CG 5690 Query 6076 GCCCGTTCTTTTGCGGCAATATTGAGTTGC-ACATATTCGCGTGCCAGGCATTTCCAGGT 6134 ||| |||||||| || ||||| ||| || || ||||| | ||||| ||| ||||| | Sbjct 5691 GCC---TCTTTTGCCGCTATATT-AGTGGCTACGTATTCTCTTGCCACGCAATTCCAC-T 5745 Query 6135 GGGGAAA-ATGGTGGTGCGCTCGTCAGATAGCAAGCGTAAGCG-CCACCCGCGATTATGC 6192 | ||| | || ||||| || | | ||| | ||| | ||| || ||||||||| Sbjct 5746 GCTCAAATACTGTAACTCGCTCATCTGGGACCAACC-TAATCTTCCATCCTCGATTATGC 5804 Query 6193 AGTGTAACCAGATCTACGCTGGTAACTACTTCACCGCGCAAGCTTTCATTGGTCCAGGCT 6252 | |||| ||| | | || |||||| || | || ||||||| |||||| Sbjct 5805 AAAGTAATGGCATCGATGGACGTGCATACTTCGCCTCTTAAATTTTCATTTGTCCAGCAA 5864 Query 6253 AAACGACCGCCTTTTCTAGAACAAAAAGGAGGAAGAACATCCAACTGATTTTCATCTGGG 6312 | ||| ||||||||||| |||||||| || || | |||||| || | | ||| | ||| Sbjct 5865 AGACGCCCGCCTTTTCTCGAACAAAATGGCGGTAAAACATCTAAGTATTCTTCGGCAGGG 5924 Query 6313 GGGTCGGCATCTATAGTAAAAATGCCAGGACAAAGATTTTTGTCAAAATAATCAATTTTG 6372 | ||| ||||| || || |||| | || | || ||||||||| ||||||| Sbjct 5925 GCGTCAGCATCAATTACAACAATGGCCGGTAACAGGGCAGGGTCAAAATAGGAAATTTTG 5984 Query 6373 CAAGTGTAATTTTCCAGCGCCACCTG-CCATTGCCGCACGGCCAATGCCCGCTCATAGGG 6431 | | || || || || | || | ||||| | ||| |||| Sbjct 5985 TCACCG----GTTGCAAAGCGTTTTGAATACTGATAGAGAGCCAAGTTTCTGTCAAAGGG 6040 Query 6432 GTTAAGGGGAGGACCCCAAGGCATGGGGTGTGTGAGGGCCGATGCATACATGCCGCAAAT 6491 ||||| || || || | |||||||| || || | || |||||||| ||| |||| Sbjct 6041 ATTAAGTGGTGGGCCAAAGGGCATGGGATGCGTTAATGCGCTGGCATACATTCCGGAAAT 6100 Query 6492 ATCATATACATATATGGGCTCTTTTAGTACTCCTATGTAAGTAGGATAGCACCTGCCGCC 6551 |||||| ||||| || || || | | || ||||||||||| || ||||||| || || Sbjct 6101 ATCATAAACATAAATAGGTTCCTCAAAAACACCTATGTAAGTGGGGTAGCACCGTCCCCC 6160 Query 6552 ACGAATGCTGGCGCGAACGTAGTCATATAGCTCATGTGAAGGCGCCAGGA---TGTTGGG 6608 | ||||| | | || | ||||| | || ||||| || ||||| | | || | Sbjct 6161 TCTGATGCTTTCTCTTACAAAATCATAAATGTCGTGTGACGGGGCCAGAAGAGTATTCGA 6220 Query 6609 CCCAAGATGTGTGCGCTGTGGTTTTTCGGCGCGGTACAAAATTTGTCTGAAAATTGCATG 6668 | | ||||| | | | |||| | ||| | ||| | ||||||||| Sbjct 6221 CAAATGATGTTT---TTCTAACTTTTGAGTCTTAAACACCAGTTGCTTAAAAATTGCAAA 6277 Query 6669 AGAGTTAGAGGAAATGGTAGGACGCTGAAACACATTAAAAT 6709 ||| || ||| ||| || ||||||||||| |||||||||| Sbjct 6278 AGAATTTGAGCTAATTGTTGGACGCTGAAAAACATTAAAAT 6318 Score = 113 bits (124), Expect = 1e-20 Identities = 472/731 (65%), Gaps = 33/731 (5%) Strand=Plus/Plus Query 13505 CCTACGGAGGGAAGAAACAGTATCCGTTACTCGGAATTGTCACCGTTGTACGATACCACT 13564 || || ||||||||||| || || ||| || || | |||| ||||||| || Sbjct 12040 CCGACTGAGGGAAGAAATAGCATAGTTTATTCACCTTTACCTACGTTACACGATACAACG 12099 Query 13565 CGAGTGTACTTGGTGGACAACAAGTCTTCTGACATTGCTTCATTGAATTACCAGAATGAT 13624 | | ||||| | || ||||| | || ||||| |||| | ||||| ||||| ||| Sbjct 12100 AAAATTTACTTTATCGATAACAAAGCATCCGACATCTCTTCCCTAAATTATCAGAACGAT 12159 Query 13625 CACAGCAACTTTTTAACCACTGTAGTGCAAAATAATGACTAT--TCCCCTATAGAGGCTG 13682 || || | |||||| | || | |||||| || | | |||||| || | Sbjct 12160 CATAGTTTATATTTAACATCCGTCATTCAAAATCCGGATTTTAATCCCCT-----GGAAG 12214 Query 13683 GCACGCAAACT---ATTAACTTTGATGAAAGGTCTAGATGGGGTGGAGATTTAAAAACCA 13739 ||||| | | || || || |||||||| |||||||||||||| |||||||||||| Sbjct 12215 GCACGGGACATCAGATAAAATTAGATGAAAGATCTAGATGGGGTGGTAATTTAAAAACCA 12274 Query 13740 TCTTACATACCAACATGCCAAACGTGAACGATTTTATGTTTACCACCAAATTTAAGGCCA 13799 | | ||| | ||||| ||||| | | ||| | ||||||| | ||| | Sbjct 12275 TTCTGCATTCAAACATACCAAATATAACCGAGTACATGTTTAGTAATTCTTTT------A 12328 Query 13800 GGGTAATGGTGGCTAGGAAAACAAACAACGAAGGCCAAACCATTTTAGAATATGAGTGGG 13859 | || | | | | | ||| | ||| || ||||| || |||||| |||| Sbjct 12329 GAGTTAAGATACCCACTCAAAAAGTTGACG--GG------CATTTAAG-ATATGAATGGG 12379 Query 13860 CAGAATTTGTGC-TACCCGAGGGTAACTATTCGGAAACCATGACTATTGACTTAATGAAC 13918 || | | | ||||||| || || | |||||| | ||| ||| || || |||||| Sbjct 12380 -TGACTCTAACCATACCCGAAGGAAATTTTTCGGAGATTATGGTTATAGATTTGATGAAC 12438 Query 13919 AATGCTATTATTGAGCATTATTTG-CGAGTAGGAAGACAGCATGGAGTGCTGGAAAGTGA 13977 |||| ||||| ||||||||| | | | || || | || || ||| ||| Sbjct 12439 GATGCCATTATCTCTCATTATTTGTCTAAT-GGCAGGTTACGCGGTGTTAATGAAGATGA 12497 Query 13978 CATTGGAGTTAAGTTTGACACCAGAAACTTTCGTCTGGGTTGGGACCCCGAAACCCAATT 14037 || || |||||| | ||||| ||||| ||| |||||| || ||| | | || Sbjct 12498 AATAGGTGTTAAGCTGGACACTAGAAATTTTAAAATGGGTTATGATCCCTATTATAAGTT 12557 Query 14038 AGTAACTCCGGGAGTGTACACTA-ATGAGGCTTTTCATCCAGATATAGTACTGCTTCCAG 14096 | | | || || |||| ||| |||| || |||||||| || | | | |||| Sbjct 12558 AATCATGCCCGGCATGTA-TCTATATGAAGCATTTCATCCCGACGTGATCTTAAGTCCAC 12616 Query 14097 GTTGCGGGGTTGATTTTACAGAGAGCAGATTAAGCAACATACTAGGTATAAGAAAGAGGC 14156 || | ||||||||| | || ||||||| || || | ||||||||||| || Sbjct 12617 ACTGTGCTATTGATTTTAGCAAAAGTAGATTAAATAATCTATTGGGTATAAGAAAAAGAT 12676 Query 14157 AGCCGTTTCAGGAAGGA-TTTGTGATTATGTATGAACACTTAGAGGGAGGCAATATTCCA 14215 || | ||| |||||| ||| | || | ||||| | |||| || || |||||||| Sbjct 12677 TACCATATCA-GAAGGATTTTATTATCACTTATGATGATTTAGTAGGGGGAAATATTCCC 12735 Query 14216 GCTCTTTTGGA 14226 ||||| || || Sbjct 12736 GCTCTATTAGA 12746 Score = 107 bits (118), Expect = 4e-19 Identities = 217/321 (68%), Gaps = 1/321 (0%) Strand=Plus/Plus Query 17728 AGCGCTTTC-AAGATGGCCACTCCCTCGATGATGCCGCAGTGGTCTTACATGCACATCGC 17786 |||||| | ||||||||||||||||||||| | ||||| ||||||||| | || ||||| Sbjct 15301 AGCGCTCCCGAAGATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGC 15360 Query 17787 CGGTCAGGATGCCTCGGAGTACCTGAGTCCCGGTCTGGTGCAATTCGCCCGCGCCACGGA 17846 || || ||||| || || || | ||| | || ||||| || |||| || || Sbjct 15361 AGGACAAGATGCTTCAGAATATTTATCTCCTGCGTTGTGTCAATTTGCAAGCGCAACCGA 15420 Query 17847 CACCTACTTCACCCTGGGAAACAAGTTTAGAAACCCCACCGTGGCTCCCACCCATGATGT 17906 || ||||| |||| | | || |||||||| || || || || || || || ||||| Sbjct 15421 AACGTACTTTTCCCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGT 15480 Query 17907 TACCACCGATCGCTCGCAGCGTCTGACGCTGCGTTTTGTGCCCGTGGATCGGGAAGATAC 17966 || || || | |||||| | || | | ||||| || | ||| |||||||| Sbjct 15481 AACTACGGAAAGATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATAC 15540 Query 17967 TACCTACTCCTACAAGGCTCGCTTTACGCTGGCTGTGGGTGACAACCGCGTGTTAGACAT 18026 || | | || || || ||| || | || ||||| ||| | | ||||| | Sbjct 15541 ACAGTATACTTTTAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTT 15600 Query 18027 GGCTAGTTCTTACTTTGACAT 18047 || |||| ||| ||||| || Sbjct 15601 GGGTAGTAGTTATTTTGATAT 15621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108993955115942