Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq25 86.0 4e-12 >seq25 Length=23434732 Score = 86.0 bits (94), Expect = 4e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 || |||||||||||||||||||| ||||| |||||||| || || ||||| ||||||| | Sbjct 21716013 TAGTCTGCTCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAGGTCCCCTTCTTTT 21715954 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 | || | || || || | || ||| | | |||||||| |||||||| || | | Sbjct 21715953 CGGGCAGAAAATCCCAGGCTGTCCAAAAAATCTCGGGATCCATTGGCATCCCAGATTTTC 21715894 Query 97522 ACACC 97526 || || Sbjct 21715893 ACTCC 21715889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346508466349010