Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq190 89.7 8e-13
>seq190
Length=3085523
Score = 89.7 bits (98), Expect = 8e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 10437 GGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATT 10496
|| || |||| |||| ||||||| | |||| || ||| ||| | || || ||| |
Sbjct 695484 GGGTGCTATGGAAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACTTCATCGATGTA 695425
Query 10497 GGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCAT 10556
|||||||| || || || ||||||||||| |||||||| || || ||||| || ||| |
Sbjct 695424 GGAGCTGGTGTCATAGATGAAGATTATAGGGGAAATGTTGGTGTTATATTGTTCAATTTT 695365
Query 10557 TCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAA 10616
|| || | ||| | | || | || ||| |||| |||| | || |||||| |
Sbjct 695364 GACAAAGAGAAATTTGAAGTGAAAAAGGGTGATGGAATTGCTCAGCTCATTTGTGAACAG 695305
Query 10617 ATTTTATATCCTAAAAT 10633
|||| ||||| ||||
Sbjct 695304 GTTTTTTATCCAGAAAT 695288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 742920491042560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |