Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq190 89.7 8e-13 >seq190 Length=3085523 Score = 89.7 bits (98), Expect = 8e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 10437 GGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATT 10496 || || |||| |||| ||||||| | |||| || ||| ||| | || || ||| | Sbjct 695484 GGGTGCTATGGAAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACTTCATCGATGTA 695425 Query 10497 GGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCAT 10556 |||||||| || || || ||||||||||| |||||||| || || ||||| || ||| | Sbjct 695424 GGAGCTGGTGTCATAGATGAAGATTATAGGGGAAATGTTGGTGTTATATTGTTCAATTTT 695365 Query 10557 TCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAA 10616 || || | ||| | | || | || ||| |||| |||| | || |||||| | Sbjct 695364 GACAAAGAGAAATTTGAAGTGAAAAAGGGTGATGGAATTGCTCAGCTCATTTGTGAACAG 695305 Query 10617 ATTTTATATCCTAAAAT 10633 |||| ||||| |||| Sbjct 695304 GTTTTTTATCCAGAAAT 695288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742920491042560