Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq25 86.0 5e-12
>seq25
Length=23434732
Score = 86.0 bits (94), Expect = 5e-12
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447
|||| | ||| | ||||| ||||||| || ||| || ||||| || || || | ||
Sbjct 21720542 AGATCTTCCTCTGATGGCGCTGCCTCCCTGCCATGCCCTCTGCCAGTTCTATGTGGTGAA 21720601
Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507
| || |||| || || |||| || | || | || ||||| |||||||| || ||
Sbjct 21720602 TGGGGAGCTGTCCTGCCAGCTGTACCAGAGGTCTGGAGACATGGGCCTGGGTGTGCCCTT 21720661
Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557
||| ||||| || || || ||||| || || ||||||||||| | ||||
Sbjct 21720662 CAACATTGCCAGCTACGCCCTGCTCACCTACATGATTGCACACATCACAG 21720711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398866832469385
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |