Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq20 93.3 8e-14 >seq20 Length=25211774 Score = 93.3 bits (102), Expect = 8e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 101909 GAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCC 101968 |||| | |||| |||||||| || || || |||||||||||| |||| | ||||| || Sbjct 21308613 GAACGAGTTGTAGCCTTTGCCGCGGTGGAGGGAATCTTCTTTTCTGGTTCTTTCGCGTCG 21308554 Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028 || |||||| | ||||| | || || ||||||| ||||| | ||||||||| | ||| Sbjct 21308553 ATATTCTGGCTGAAGAAGCGAGGACTTATGCCTGGCCTCACGTTTTCCAATGAGCTTATT 21308494 Query 102029 TCTAGGGACGA 102039 || ||||| Sbjct 21308493 AGCAGAGACGA 21308483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988757415019315