Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq35 100 3e-16
>seq35
Length=13989929
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933
|| ||||| || ||||| || | || |||||||| |||||||||||| || ||||||
Sbjct 11962816 GGTTACCTGGGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTACTTGCTGGAAGTGATG 11962757
Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993
|| ||||| || || || || || ||||||| || || || ||||| |||||||| |||
Sbjct 11962756 CCCCAGGCAGAGAACCAGGGTCCAGACATCATGGAACATGTAAACTCCCTGGGAGAGAAG 11962697
Query 128994 CTCAA 128998
|| ||
Sbjct 11962696 CTGAA 11962692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447385522602160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |