Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq22 84.2 6e-11 >seq22 Length=17426531 Score = 84.2 bits (92), Expect = 6e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 364120 CTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAA 364179 || |||| |||||| || || || || | ||||| || || || |||||| | |||||| Sbjct 1406526 CTTTGGTATGCCATTATTGAGTCTCAAACAGAGACGGGCACCCCATATATGGTCTACAAA 1406467 Query 364180 GATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTA 364239 ||||| || || || ||| |||||||||| | || || ||||| | |||||||| Sbjct 1406466 GATTCCTGTAATCGGAAGAGCAACCAGCAGAATCTGGGAACAATCAAATGCAGCAACCTG 1406407 Query 364240 TGTACCGAGAT 364250 ||||| || || Sbjct 1406406 TGTACAGAAAT 1406396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302264927880926