Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq35 104 3e-17
>seq35
Length=13989929
Score = 104 bits (114), Expect = 3e-17
Identities = 72/82 (88%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139
|||| || || ||||| || ||||||||||||||||| |||||||| ||||| |||||||
Sbjct 11960696 AGCTCCAAGAGAAAGGCATCTACAAAGCCATGAGTGAGTTTGACATCTTTATCAACTACA 11960637
Query 10140 TAGAAGCATACATGACAATTAA 10161
||||||| ||||||||||| ||
Sbjct 11960636 TAGAAGCCTACATGACAATGAA 11960615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552266384170720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |