Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq81 84.2 2e-11 >seq81 Length=5456323 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/118 (77%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 118178 TCCGTCGCG-ACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATAC 118236 ||||| ||| ||| |||| || ||||||| || ||| |||| |||||| ||| Sbjct 3261496 TCCGT-GCGTACCTGCCCGCCCGCTCTCTTGGTAGTAATTCTCCATGGATTTGCTCATCG 3261554 Query 118237 TGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGT 118294 ||| || ||||| |||| ||||||||| || |||||||||||||||||||| | ||| Sbjct 3261555 AGTGGTGGATCACGAACCTCACGTCGGGCTTGTCGATGCCCATCCCGAACGCCACCGT 3261612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381469466358792