Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq81 84.2 2e-11
>seq81
Length=5456323
Score = 84.2 bits (92), Expect = 2e-11
Identities = 91/118 (77%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 118178 TCCGTCGCG-ACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATAC 118236
||||| ||| ||| |||| || ||||||| || ||| |||| |||||| |||
Sbjct 3261496 TCCGT-GCGTACCTGCCCGCCCGCTCTCTTGGTAGTAATTCTCCATGGATTTGCTCATCG 3261554
Query 118237 TGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGT 118294
||| || ||||| |||| ||||||||| || |||||||||||||||||||| | |||
Sbjct 3261555 AGTGGTGGATCACGAACCTCACGTCGGGCTTGTCGATGCCCATCCCGAACGCCACCGT 3261612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381469466358792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |