Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_012584.1 Length=30570 Score E Sequences producing significant alignments: (Bits) Value seq4931 417 2e-112 >seq4931 Length=27746 Score = 417 bits (462), Expect = 2e-112 Identities = 1297/1973 (66%), Gaps = 46/1973 (2%) Strand=Plus/Plus Query 17414 ATAGGAAAGGGAAACATGGCAGCCATGGAAATCAATATTCCAGCGAACATGTGGATTGGT 17473 ||||| || ||||| | | | |||||||||||| || | || ||| |||||| | Sbjct 16517 ATAGGCAAAGGAAATGTTGAATGCATGGAAATCAACATAGCGGCCAACCTGTGGAAGAAT 16576 Query 17474 TTTCTGTATGCCAACGTGGCGCAGTATGTACCTGACGCCTACAAAGTAGACCCTACAAAC 17533 ||||||||| | || | |||| |||| | || || || ||| || |||| Sbjct 16577 TTTCTGTATTCTAATATCGCGCTGTATCTGCCCGATAACTTTAAAACCACTCCCGCAAAT 16636 Query 17534 ATTGCAATGCCTGAAAACAAGAACACCTACA-GCT-ACATGAATCAAAGAATCGCGCCCA 17591 | | | |||| | | || | ||| | ||| |||||||| | || | || Sbjct 16637 GTGGTATTGCCGCAGGATCAG--CGGCTATATGCTTACATGAATTCTCGCATTCCAGCCG 16694 Query 17592 CAGGCCTGGTGGAAACGTATGTGAACATGGGAGGCAGATGGTCGGTTGACTTCATGGATA 17651 || ||||| || ||| | ||||| ||| ||| ||||| | || | ||||| | Sbjct 16695 GGGGTCTGGTAGAGGATTATATCAACATAGGAACCAGGTGGTCAATAGATGTGATGGACA 16754 Query 17652 CTGTGAATCCCTTTAATCACCACCGCAACGATGGCTTAAAGTACCGCTCACAGGTTCTTG 17711 | || ||||| |||||||| ||| | || ||| || | |||| | || ||| | | | Sbjct 16755 CGGTTAATCCATTTAATCATCACAGAAATACTGGTTTGAGGTACAGGTCTCAGCTATTAG 16814 Query 17712 GCAATGGCAGATACGTAGACTTTCACATTCAAGTGCCTCAGAAGTTCTTTGCAATCAAAA 17771 | ||||| | || | |||||| ||||| || || || ||||| |||||| | |||| Sbjct 16815 GAAATGGTCGCTATGCTTCCTTTCATATTCAGGTTCCGCAAAAGTTTTTTGCACTTAAAA 16874 Query 17772 ATTTGCTGCTACTGCCTGGAAGTTACACTTACGAGTGGAGTTTCAGGAAGGATGTGAACA 17831 |||||| || || || ||| |||| |||||| ||| ||| || || ||||| |||| Sbjct 16875 GTTTGCTTCTGCTACCGGGATCGTACAGTTACGAATGGTCTTTTAGAAAAGATGTAAACA 16934 Query 17832 TGGTTCTTCAGAGCACCCTAGGAAATGATCTGCGGGCGGATGGAGCTTCCCTGGAAATTC 17891 || || | ||||| || || || ||||||||| ||| ||| ||||| || | | || Sbjct 16935 TGATTTTGCAGAGTACTCTTGGCAATGATCTGAGGGAGGACGGAGCGTCAGTAACATTTG 16994 Query 17892 ACAGTGTAAATCTGTATGCTAGTTTCTTTCCCATGGCACATAACACTGCTTCCACGCTTG 17951 |||| | | || | ||||| ||||||||| ||| | |||||||||||||| || || | Sbjct 16995 ACAGCATTAGCCTATTTGCTACTTTCTTTCCGATGTCTCATAACACTGCTTCTACTCTGG 17054 Query 17952 AAGCAATGCTGCGAAATGAAACCAACGACCAAACTTTCCTAGAGTACTTAAGCAGCGCTA 18011 || | ||||| || ||||| ||||| || | ||| || || | ||||| || Sbjct 17055 AAACTATGCTTCGCAATGAGGTTAACGATCAGTCCTTCGGCGACTATCTTTCCAGCGTTA 17114 Query 18012 CTATGATGTTCCCTATTCCAGCGGGGCAAACACAAATTCCTGTCAGCATTCCTGCTCGGA 18071 ||| | | ||||||| || |||||| | | ||| || ||||| || ||| Sbjct 17115 ACATGCTTTATGCTATTCCTCCGCATCAAACAACAGTGCCTATCTCTATTCCAGCAAGGA 17174 Query 18072 ACTGGGCTGCTTTCAGAGGGTGGAGCTTCACCCGCCTTAAACAAAGTGAAACTCCCAACA 18131 | ||||| || || ||||| ||| || || | || |||||| ||||| || | || Sbjct 17175 ATTGGGCGGCCTTTAGAGGTTGGGCATTTACTAGACTAAAACAACAGGAAACACCAACCA 17234 Query 18132 TTGGGTCTCCTTTTGATCCTTACTTTACCTACAGCGGAAGCATTCCATTTTTGGATGCCA 18191 |||| ||| | ||||| || ||||||| ||| || || || | || |||||| | Sbjct 17235 TTGGCTCTGCATTTGACCCATACTTTAGGTACTCGGGCTCAATCCCGTATTGGGATGCGA 17294 Query 18192 CTTTCTATCTCACCCACACCTTTCAG-CGTGTCTCCATCATGTTTGATTCTTCTGTCAGC 18250 | || ||| | | |||| || |||| || |||| |||||||||||| || || Sbjct 17295 CCTTTTATTTATCTCACA-CTATCAGAAAGGTGGCCATACAGTTTGATTCTTCAGTAAGT 17353 Query 18251 TGGCCTGGAAATGATCGTTTGCTGACCCCAAATGAATTTGAGATAAAACGAAATATTGAT 18310 |||||||||||||| | | | | || ||||||||| | |||||| || | | || Sbjct 17354 TGGCCTGGAAATGACAGACTTTTAATACCTAATGAATTTCACATAAAAAGAGAGGTGGAC 17413 Query 18311 GGAGAAGGGTTGTGTGTGGCTCAAAGCAACATGACCAAGGACTGGTTTCTGGTGCAGATG 18370 | ||||| | |||| |||| || || ||||| |||| | || | || ||| Sbjct 17414 GCGGAAGGCTATAACACCTCTCAGAGCATAATTACTAAGGATTGGTATATGATTCAAATG 17473 Query 18371 CTAGCAAATTATAACATTGGCTACCAGGGCTATCATCTTCCTGACA-ACAACAAAGACAG 18429 || || | || || || || ||||| || | ||| || || ||| | | ||||| || Sbjct 17474 CTCGCTCACTACAATATCGGATACCAAGGTTTTCACCTACC-CACAGATTATAAAGATAG 17532 Query 18430 AACCTACTCCTTCTTACGCAACTTTGAACCTATGACCCGACAAGTGGTAGA--CAGACAA 18487 | || ||||| ||| | || |||||||| ||| ||||||| || || | | || Sbjct 17533 ATTGTATTCCTTTTTAAGAAATTTTGAACCCATGTGTAGACAAGTTGTGGATCCTGGTAA 17592 Query 18488 CTTGATGG-GCGATACGTAGATGTAATGCTGACAAAAA--GGTTCAACAACTCAGGATGG 18544 || || ||| | || |||| ||| | | || || ||||| | Sbjct 17593 ---GACGGAAAAATATCAACCCGT--TGCTCTTAAATATCAGCATAATAATTCAGGTTTT 17647 Query 18545 AAATCAGCC--TCTGCTCCCATCTTCCCGAGAGAAGGTGCTCCTTATCCTGCCAATTGGC 18602 ||| | || | || || ||| | || |||| ||||||||| || |||| Sbjct 17648 AAA--AACCATTATGGACC---CTTTGGGCGACAAGGCCATCCTTATCCCTGTAACTGGC 17702 Query 18603 CCTATCCGCTATGTGGAGAAATGGCTTGGGCCACAAGAACTCAAAGGAAGTTCCTTGTGG 18662 | | ||||| |||||| ||| | || | ||||| || || || || || Sbjct 17703 CTTTCCCGCTCATCGGAGAACAGGCAGGTAAAACCATTACTCAGAGAAAATT-TTTATGT 17761 Query 18663 ATCGGTATA-TGTACCGCATCCCCTTTTCCAGCAACTTCATGTCCATGGGCGCACTGACT 18721 | | | | ||| | || || || ||| |||||| ||||||||||| |||| || Sbjct 17762 GACAGAACACTGTGGAGGATTCCGTTCTCCTCCAACTTTATGTCCATGGGAACACTAACA 17821 Query 18722 GACCTAGGGCAGAATTTACTGTATGCAAACTCAGCCCACTCTCTAGAGATGACATTTGAA 18781 || || || || ||||| || |||||||| ||||| || || |||| |||||| | ||| Sbjct 17822 GATCTGGGACAAAATTTGCTATATGCAAATTCAGCTCATGCTTTAGACATGACAGTCGAA 17881 Query 18782 GTTGATCCAATGACAGAAGCAACCTATCTCTACATTCTCTTTGAAGTGTTTGA-TTGTGT 18840 || ||| ||||| ||| |||| |||||| || || |||||||| ||||| |||| Sbjct 17882 GTAGATTCAATGGAGGAACCAACTTATCTCATGATGCTATTTGAAGTATTTGACATGTG- 17940 Query 18841 TCGCATTCACCAACCACACAGGGGCATCATTGAGGCAGTGTACTTGCGTACTCCATTCTC 18900 | | || || || || | || |||| || | | || | | || || || || Sbjct 17941 CAGAGTGCATCAGCCTCAACGAGGTGTCATAGAAGTTATTTATCTAAGAACCCCCTTTTC 18000 Query 18901 GGCTGGCAACGCAACTACGTAATCATGGGGTCTTCAGAAACAGAACTACAACATCTGGTG 18960 ||| || ||||| | || ||| |||||| | ||||| ||| || ||| | | Sbjct 18001 GGCAGGTAACGCCGCAACATAAATATGGGGACCTCAGAGGACGAAATAAAACGAATTATC 18060 Query 18961 ACAGACTTGGGCATAGGGCCTTATTTTTTAGGTGTTTTTGACAAACACTTTCCTGGTTTT 19020 | || ||| | | |||| |||||| ||| | ||| |||| |||||| || ||| Sbjct 18061 TCCGATTTG---AATGTACCTTGTTTTTTGGGTACCTATGATAAACGCTTTCCGGGGTTT 18117 Query 19021 TTACATGTTTCAAAACCT--TCCTGCGCCATTGTAAATAC--TGCTTCCCGAGAAACTGG 19076 | | | | | | | ||| ||||||||||| || |||| || ||| || Sbjct 18118 ATCC--GAAAGGACAGGTTATGCTGTGCCATTGTAAACACCGGGCTT--CGCGAAGAGGG 18173 Query 19077 AGGTGTTCACTGGTTGGCAATGGCCTGGTACCCCCCTTCTAGAACATTTTACATGTTTGA 19136 ||||| || ||| | || | || ||| | ||| | || |||||||||||||||||| Sbjct 18174 CGGTGTCCATTGGATTGCGTTTGCTTGGAATCCCTATATTAAAACATTTTACATGTTTGA 18233 Query 19137 CCCCTTTGGGTTTTCAAATGCAAGA-CTAAAACAAGTGTACAACTTTGAATACGAACGGT 19195 || || || || || || ||||| | ||| |||| |||||||| ||||| || || Sbjct 18234 TCCATTCGGATTCTCGGAT-CAAGATTTGAAAAAAGTTTACAACTTCGAATATGAGCGAA 18292 Query 19196 TGTTA-AAAAGATCAGCTCTAAATAACTCAGAGGACAGGTGTGTCACTTTGGTACAGAGT 19254 ||||| |||| | | || || | || | || ||||| ||| | || || Sbjct 18293 TGTTAGAAAACAGC-GCAGTATTCTCCACAAAAACCAAATGTGTTACTGTCATAAGCAGC 18351 Query 19255 ACCCAAACAGTGCAAGGACCTCACAGTGCCGCCTGTGGTCTTTTTTG-TGTGCTGTTCCT 19313 ||| | ||||| | || ||| || | ||| ||||| ||||| |||| | || | Sbjct 18352 TGTCAATCGGTGCAGAGTCCCTACAATGGCTGCTGCGGTCTGTTTTGTTGTG-TCTTTTT 18410 Query 19314 AGCAGCCTTTGTAAAATATCCACAAAATCCTATGGATAAGAATCCAATCATGG 19366 ||||||| | ||||| || |||||||||||||||| ||||| |||| Sbjct 18411 GAAAGCCTTTACTATGTATCCTCATTATCCTATGGATAAGAACCCAATAATGG 18463 Score = 208 bits (230), Expect = 1e-49 Identities = 455/672 (68%), Gaps = 26/672 (4%) Strand=Plus/Plus Query 3400 GATCCAGTCATA-GTTG-GTGTGATTGGCATTATAGTGAAAAATATCTTTTAATAATAGT 3457 |||||| ||||| | || |||| | || || ||| ||| ||||||||||||||||| Sbjct 3639 GATCCAATCATAAGATGAGTGTAA--GGAATGGTAGGCAAAGATATCTTTTAATAATAGG 3696 Query 3458 GTAATAGC----AGTAGGCAAAGCTTTGGTGTAAGTGTTAATGAAGCGAGCTACTTGTGA 3513 || || || |||||| |||| || ||||| ||||| || | || || | Sbjct 3697 GTGATTGCTAAGGGTAGGC----CTTTAGTATAAGTATTAATAAATCTGTTTAGCTGAGC 3752 Query 3514 AGGTTGCATTTTGGGACTAATAATGTGACACTTACTTTGGATTTTTAAGGTAGCTATATT 3573 |||||||||||||| || | || ||| | ||| ||| ||||||| || | |||||| Sbjct 3753 GGGTTGCATTTTGGGGCTCAGTATATGATATTTAGCTTGAATTTTTAGTGTGGATATATT 3812 Query 3574 ACCAGCATGATCTTTCCTGGGATTCATGTTGTGCAAGACTACAAACACAGAGTATCCTGT 3633 ||| |||||| | || ||||| || || || || ||||||| | |||| || | Sbjct 3813 TCCACTTAAATCTTTTCGCGGGTTCATATTATGTAATACCACAAACAGATAGTACCCGCT 3872 Query 3634 ACATTGGGGGTATCTGTCATGCAGTTTTGAAGGAAAGGCATGAAAGAACTTTGCAAT--- 3690 || ||| ||| | ||| |||||||||||||| || ||||| || |||||||| Sbjct 3873 GCACGAGGGATATTTTTCAAATAGTTTTGAAGGAAACGCGTGAAAAAATTTTGCAATAGG 3932 Query 3691 GCTCTTATGTTTTCCCAGTTCCTCCATACATTCATCAATGATGATGCAAATTGGTCCTTG 3750 ||| || ||| | | |||||||| ||||||||||| ||| || ||||| Sbjct 3933 GCTGTT---CCCTCCTAAATTTTCCATACACTCATCAATGATAATGGCTATGGGTCCGGT 3989 Query 3751 TTTGGCTGCTTTTGCAAATACATTGTTAGGATGAGCTACATCATAATTTTGTTCAGCTGT 3810 |||||| || | | ||||| ||| || ||||| ||| ||||||||||| ||| | Sbjct 3990 TTTGGCCGCCTGTACAAATTTATTATTTGGATGCCCTAAATCATAATTTTCTTCGTTTAA 4049 Query 3811 TAGGTCCTCATAGGTAAGTGTTACAAGTTTTGGGTTTAGAGTCCCACTTTGAGGCACGAT 3870 || |||| || | ||| | | | || ||| || ||| | |||||||| || Sbjct 4050 GAGATCCTTGTACGATAGTTGCGCGAATCGAGGAGTTAATGTACCAGTCTGAGGCACAAT 4109 Query 3871 ---AGTGTGTTGTGGACCAATTTTGTAGTTGCCCTCCAGAAGCTGAACTGTCCA-GGCAG 3926 | | | | || || || ||||| ||||| | || || || |||| | || Sbjct 4110 TTCACCATTCTTT---CCCATGTTATAGTTTCCCTCTATAATTTGTGCTTTCCATGACAT 4166 Query 3927 ACATTTCTTgggggggAATCATGTCTACTTGAGGCACAACAAAAAATACAGTTTCTGGAG 3986 | ||||| || ||||| ||||||||| | | ||| ||||| |||| ||| || || | Sbjct 4167 A-ATTTCCTGTGGGGGGATCATGTCTGCATAAGGGGTTACAAAGAATATAGTCTCCGGGG 4225 Query 3987 GGGGATCAATTAGGTGACAGGATAGTAGGTTTCGCAGAAGTTGAGATTTCCCACTACCTG 4046 ||||| | || | | || | || |||| || | ||| ||||| |||||||| | Sbjct 4226 CGGGATTTAATAATTTGGACGACATAAGATTTCTCAATAATTGGGATTTTCCACTACCAG 4285 Query 4047 TAGGCCCATATA 4058 | || ||||||| Sbjct 4286 TTGGACCATATA 4297 Score = 134 bits (148), Expect = 3e-27 Identities = 251/366 (69%), Gaps = 2/366 (1%) Strand=Plus/Plus Query 16193 ATGACGACCCCATCAATGCAGCCCCAATGGGCCTTCATGCACATCGCTGGACAGGACGCT 16252 ||| | || || || |||| || |||||| | | | | || ||||| ||||| || ||| Sbjct 15314 ATGGCCACTCCCTCGATGCTCCCGCAATGGTCTTACTTACATATCGCAGGACAAGATGCT 15373 Query 16253 TCACAGTACCTGTCCCCTGGCGTAATG-CAATTTGCAGCTGCCACGGAGACCTATTTTTC 16311 ||| | || | || |||| ||| || ||||||||| || || || || || ||||| Sbjct 15374 TCAGAATATTTATCTCCTG-CGTTGTGTCAATTTGCAAGCGCAACCGAAACGTACTTTTC 15432 Query 16312 CCTGGGCAACAAGTTCCGAAATCCGACTGTGGCTCCCACTCATGATGTAACAACAGATCG 16371 ||| || | || || |||||||||| || || || || || |||||||| || || | Sbjct 15433 CCTAAGCGATAAATTTAGAAATCCGACGGTTGCGCCGACACACGATGTAACTACGGAAAG 15492 Query 16372 TTCACAGAGGCTGACACTACGCATAGTGCCGGTGGACAGAGAAGACAGCCAGTATACGTA 16431 || ||||| || | || | | || || | ||| | |||||| | |||||||| | Sbjct 15493 ATCGCAGAGACTACAATTAAGATTTGTTCCAGCGGAAAAAGAAGATACACAGTATACTTT 15552 Query 16432 CAAGACCAGATTTCAACTGTCTGTAGGAGACAATCGCGTGCTGGATATGGCTAGCACCTA 16491 || || |||||||||| | || || || || | | | ||| ||| ||| | || Sbjct 15553 TAAAGCCCGATTTCAACTCACCGTCGGTGATAACAGAATATTAGATTTGGGTAGTAGTTA 15612 Query 16492 TTTCGACATTCGAGGTCGACTAGACAGGGGTCCCAGTTTTAAACCTTACTCGGGAACCGC 16551 ||| || || || ||||||| |||||| ||||||||||||| || || || Sbjct 15613 TTTTGATATAAAGGGAAAGATAGACAGAGGTCCCTCTTTTAAACCTTACAGTGGCACAGC 15672 Query 16552 CTACAA 16557 ||||| Sbjct 15673 ATACAA 15678 Score = 120 bits (132), Expect = 6e-23 Identities = 460/720 (64%), Gaps = 2/720 (0%) Strand=Plus/Plus Query 5356 TTGTTATCTTGTCTGGTAGCAAATGAACCATAGAGGGCATTGCTTAACAGTTTTGCTATA 5415 || |||||| ||||| ||||| ||||| || || || || |||||||| || || Sbjct 5598 TTATTATCTAACCTGGTGGCAAAGGAACCGTACAGTGCGTTTGACAACAGTTTAGCGATG 5657 Query 5416 CTTCTCATCACCATAtttttttGTTTGTCTGCTCTTTCTTTTGCTGCGATATTGATAGTA 5475 |||| | | || | | ||| || || |||||||| || ||||| | | Sbjct 5658 CTTCGCTGTGTGCTGTTGTGGTTTTTTTCCGCGGCCTCTTTTGCCGCTATATTAGTGGCT 5717 Query 5476 ACATAGGTTCTTACAAGACATTTCATTTGTGGAAATAGGGTAGTTCGGTCTTCAGGTAAG 5535 || || |||| | | || ||| || ||||| ||| ||| || || || | Sbjct 5718 ACGTATTCTCTTGCCACGCAATTCCACTGCTCAAATACTGTAACTCGCTCATCTGGGACC 5777 Query 5536 ATTTTTACTTTCCATCCTCGGTTGTGGAGTGTAATGACGTCAATTGTTGTTGCTACCTCT 5595 | | | ||||||||||| || || | |||||| | || || | || ||| || Sbjct 5778 AACCTAATCTTCCATCCTCGATTATGCAAAGTAATGGCATCGATGGACGTGCATACTTCG 5837 Query 5596 CCCCGTAAGGTTTCATTGGTCCAGCATAATCTTCCTCCTTTTCTACTGCAAAATGGAGGC 5655 || | ||| ||||||| |||||||| | | || |||||||| |||||||| || Sbjct 5838 CCTCTTAAATTTTCATTTGTCCAGCAAAGACGCCCGCCTTTTCTCGAACAAAATGGCGGT 5897 Query 5656 AGGACGTCTAAGTCTTTTTCAGAGGGGGGATCTGCATCTATGAGCACAATGCCGTGAAGC 5715 | || ||||||| || ||| | |||| || ||||| || | |||||| | | | | Sbjct 5898 AAAACATCTAAGTATTCTTCGGCAGGGGCGTCAGCATCAATTACAACAATGGCCGGTAAC 5957 Query 5716 AAATGACTGTCAAAGTAACTTAATTTTTC-CCTTTGAGAAAGTTTTATTTGCCAGTTCTC 5774 | | |||||| || | ||| || || | |||| || || | | | Sbjct 5958 AGGGCAGGGTCAAAATAGGAAATTTTGTCACCGGTTGCAAAGCGTT-TTGAATACTGATA 6016 Query 5775 TAGAGCTTCGGCTCGTGCTTTTGGATCTAAAGGCCAGCCTGTTGGCATGGGATGAGTTAA 5834 ||||| | || | |||| | || ||| ||||||||||| ||||| Sbjct 6017 GAGAGCCAAGTTTCTGTCAAAGGGATTAAGTGGTGGGCCAAAGGGCATGGGATGCGTTAA 6076 Query 5835 AGCAGAAGCATACATGCCACAGATGTCATATACATAGATAGGTTCTGTAACTTCTCCTAG 5894 || |||||||| || | || ||||| ||||| |||||||| || | |||| Sbjct 6077 TGCGCTGGCATACATTCCGGAAATATCATAAACATAAATAGGTTCCTCAAAAACACCTAT 6136 Query 5895 ATAAGTAGGGTAGCAACGTCCTCCTCGAATGCTTTGGCGCACAAAGTCATACATTTCCCT 5954 ||||| |||||||| ||||| |||| ||||||| | ||||| ||||| || || Sbjct 6137 GTAAGTGGGGTAGCACCGTCCCCCTCTGATGCTTTCTCTTACAAAATCATAAATGTCGTG 6196 Query 5955 TGAAGGAGCTAGCAGACAATTGTGAAAATTTGGTTTTCCTGGTCTTTGTTCGGTATATAA 6014 ||| || || || ||| ||| |||| ||||| || |||| || | | Sbjct 6197 TGACGGGGCCAGAAGAGTATTCGACAAATGATGTTTTTCTAACTTTTGAGTCTTAAACAC 6256 Query 6015 GGTTTGCTTAAATATTGCATGAGAGTTGGCACTTATAGTTGGTCGTTGAAAGATATTAAA 6074 ||||||||| |||||| ||| || | || || ||||| || ||||| | |||||| Sbjct 6257 CAGTTGCTTAAAAATTGCAAAAGAATTTGAGCTAATTGTTGGACGCTGAAAAACATTAAA 6316 Score = 93.3 bits (102), Expect = 8e-15 Identities = 188/275 (68%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 17031 AAGCAGCCCCCAACAGACCAAACTACATCGGCTTCCGAGACAATTTTATTGGACTCATGT 17090 |||| || || ||||| ||||| || || || || | || || ||||| || | |||| Sbjct 16138 AAGC-GCGCCAAACAGGCCAAATTATATAGGTTTTAGGGATAACTTTATCGGGTTAATGT 16196 Query 17091 ACTACAACAGCAATGGCAATCAAGGTGTCCTTGCAGGACAAGCCTCACAGCTGAATGCTG 17150 || ||||| ||| ||||| ||||| | || || ||| | |||||||| ||||||| Sbjct 16197 TTTATAACAGTAATAGCAATTTGGGTGTATTAGCCGGTCAATCGTCACAGCTTAATGCTG 16256 Query 17151 TGGTAGATTTGCAGGACCGCAACACAGAACTAAGCTATCAATTCCTGCTTGATTCTCTAT 17210 | | || | || ||| | || |||||| | ||||| | || | ||| | || Sbjct 16257 TCATCGACCTTCAAGACAGAAATACAGAATTGTCATATCAGCTTATGTTAGATAATTTAC 16316 Query 17211 ATGACCGCAGCAGATACTTTTCCCTGTGGAATCAGGCCATAGATAGCTACGATCCTAGAG 17270 | || | | |||| | | |||||||||| ||| | ||| || ||||| |||| Sbjct 16317 ACGATAGAACTCGATATTACAGCTTGTGGAATCAAGCCGTGGATTCATATGATCC-AGAG 16375 Query 17271 -TAAGGATCATTGAAAATGATGGAGTAGAAGACGA 17304 | | ||||| || ||| ||||||||||||||| Sbjct 16376 GTCCGAATCATAGACAATATTGGAGTAGAAGACGA 16410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97626762038312