Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2 306 5e-78
seq202 300 2e-76
seq10 165 1e-35
>seq2
Length=36660411
Score = 306 bits (338), Expect = 5e-78
Identities = 828/1261 (66%), Gaps = 16/1261 (1%)
Strand=Plus/Plus
Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955
|| ||||| || || | | || | ||| ||||| | || || || |||| ||
Sbjct 31061656 GGGATCGTGGTGTTCCGCTTGATGAGCGGAGTCATGACGCCGCCGGCCGTCTCGATGCCC 31061715
Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCC 7015
|| ||||| || |||||||| | || | || ||| || || || | || ||
Sbjct 31061716 AGCGACAGCGGAGTCACGTCGAGCAGCAGCAAGTCCTGCACGTTCTCAGACTTGTCCCCG 31061775
Query 7016 GTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTT 7075
| | |||||| || || || | ||| ||||| || |||||||| |||||||| || |
Sbjct 31061776 ATGAGGATGGCCGCCTGCACAGCCGCGCCGTAGGCCACCGCCTCGTCGGGGTTGATGCTC 31061835
Query 7076 TTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGT 7135
|| ||||| || || ||||| || ||||| | || | || || || ||||| ||
Sbjct 31061836 TTGTTCAGCTCCTTGCCGTTGAAGAAATCCTGCAGCAGCTTCTGGATCTTGGGGATGCGG 31061895
Query 7136 GTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGA 7195
||||| || || |||| ||||| || | | | ||| || | ||| | || ||
Sbjct 31061896 GTCGAGCCGCCCACCAGCACGATCTCCTGGATCTGACCTTTGTCTAGCTTGGCATCGCGC 31061955
Query 7196 AGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAA 7255
|| | || || || || |||| ||||| | ||| || ||||| ||
Sbjct 31061956 AGCGCCTTCTCCACGGGCTCCAGGGTCCCGCGGAAGAGGTCGGCGTTGAGCTCCTCGAAG 31062015
Query 7256 CGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATG 7315
|| || ||||| ||||| || |||||||| ||||| ||||| | ||| || || || |||
Sbjct 31062016 CGGGCGCGGGTGATGGACGTGTAGAAATCCACGCCCTCGTAGAGCGAGTCGATCTCGATG 31062075
Query 7316 GTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGA 7375
| | || | | ||| | || ||||| |||||||| || ||||| || | ||
Sbjct 31062076 CTCGCCTGCGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCAGGCCGTGCGCAGCCGC 31062135
Query 7376 CGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAG 7435
|| | ||| ||| ||| ||| || ||||| || || || || ||||| || |
Sbjct 31062136 CGCACGGCGCGCTTGTTGGGCCCAATGTCCTTCTTGTGCTTGCGCTTGAACTCCTCGGCC 31062195
Query 7436 AAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTC 7495
| ||| | | | | ||||| ||||| || |||| ||| || || || || ||
Sbjct 31062196 AGGTGGCTGACCATGCGGTTGTCGAAGTCTTCGCCCCCCAGGTGGGTGTCGCCGGCCGTG 31062255
Query 7496 GCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCA 7555
| ||||| || ||||| || | || ||| | | | || || || || || || ||
Sbjct 31062256 GACTTGACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAAAGTGCCGCCG 31062315
Query 7556 CCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATCGAGACCG 7609
||||||||||| ||||| |||||| | ||| || | | ||||| || || |||
Sbjct 31062316 CCCAGGTCAAAGATGAGCACGTTCTTCTCGCCGCCCGCGCAGCCCTTCTTGTCCAGGCCG 31062375
Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669
|| ||||| ||||||||||| || || || || || || || ||| ||||| | ||
Sbjct 31062376 TAGGCGATGGCCGCCGCCGTGGGCTCGTTGATGATGCGCAGCACGTTGAGGCCCGTGATG 31062435
Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729
|| |||| || || || || || || ||||| ||||| ||||||||||| || || | |
Sbjct 31062436 GTGCCCGCGTCCTTGGTGGCCTGGCGCTGCGAGTCGTTGAAGTAGGCCGGCACGGTGATG 31062495
Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789
|| ||| | || || ||||| || | || ||||| || ||||| ||||| ||
Sbjct 31062496 ACGGCGCTCTGCACCTTGCCCCCGAGGTAGGCCTCGGCGATCTCCTTCATCTTGGTGAGG 31062555
Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTC 7848
||||| || || ||||| || | | | | || ||| | || || || | || || |
Sbjct 31062556 ACCATGGAGGAGATCTCCTCCG-GGAAGAAGGTCTTCATCTCCCCCTTGTACTCCACCTG 31062614
Query 7849 AATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908
| |||| || || | || | ||| ||| ||| | ||||| ||
Sbjct 31062615 CACTTTGGGCTTGCCC---CCCTCGCTCACCACCCGGAACGGCCAGTGCTTCATGTCCGA 31062671
Query 7909 TTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGT 7967
|| ||| || | |||| ||||| | |||||| || | ||| || || || | ||||
Sbjct 31062672 CTGCACC-GTGGCGTCCTCGAACTTGCGTCCGATCAGCCTCTTGGCGTCGAAGATGGTGT 31062730
Query 7968 TTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTT 8027
| ||||||||||||| |||||||| || ||||| ||||| || || || | |
Sbjct 31062731 TGGTGGGGTTCATGGCCACCTGGTTCTTGGCGGCGTCGCCGATGAGCCGCTC---GGTGT 31062787
Query 8028 CCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTA 8087
| || || || ||||| ||||| || || || || |||||||| || || || || |
Sbjct 31062788 CGGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCCA 31062847
Query 8088 CGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTG 8147
| | | | ||| |||| || |||||||| || || || || | || || ||||| |
Sbjct 31062848 CCTTGCCATGTTGGAAGACCCCCACGCACGAGTAGGTGGTGCCCAGGTCGATGCCGATAG 31062907
Query 8148 C 8148
|
Sbjct 31062908 C 31062908
>seq202
Length=1299801
Score = 300 bits (332), Expect = 2e-76
Identities = 1033/1592 (65%), Gaps = 28/1592 (2%)
Strand=Plus/Minus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||||||| ||||||| ||||| ||||| | ||||| |||||| || || ||
Sbjct 1284143 TCATCTTCAGCTTTATATTTTTCTGCATCCAGAACCATACGTTCAATCTCCTCCTTGCTC 1284084
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| ||||| ||||| || ||||| | | || || | | ||| ||
Sbjct 1284083 AGGCGGCCCTTGTCATTGGTAATGGTGATCTTGTTAGCCTTCCCGGTGCTCTTGTCCATG 1284024
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| | ||||| | ||||||||| ||||| | || ||| | || | || || ||
Sbjct 1284023 GCTGTGACATTGAGAATACCATTGGCATCGATGTCAAACGTCACCTCGATCTGAGGAACT 1283964
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAAT-GTACCAAGTAAACTGTTATCCGT 6807
||||| ||||| | || || || || | ||||| || |||| | |||| ||| |
Sbjct 1283963 CCCCTGGGTGCAGGAGGTATTCCAGTCAGGTCAAAGCGTCCCAAC-AGGTTGTTGTCCCT 1283905
Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867
| | || | || || ||||| || | || ||| |||| || || |||
Sbjct 1283904 TGTCATCGCTCTCTCGCCCTCATATACCTGGATCAATACCCCAGGCTGGTTGTCTGAGTA 1283845
Query 6868 CGTTGAGAAGATTTGT-TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926
|| | |||||| || ||| | |||| || || || | || | | || | |
Sbjct 1283844 TGTGGTGAAGATCTGAGTCTGT-TTAGTGGGGATGGTGGAGTTGCGCTTGATCAAGATAG 1283786
Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986
|||| | ||| || || || | ||| || || || || | ||||||| | | ||
Sbjct 1283785 TCATCACACCCCCAGCTGTCTCCAATCCCAGGGAGAGGGGAGCTACGTCCAGCAAAAGCA 1283726
Query 6987 GGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046
| || || || || | |||||| | || || || || ||||| | || || |
Sbjct 1283725 GATCCTGCACCTTCTCAGACTTGTCACCCATCAAAATAGCTGCCTGGACTGCAGCTCCAT 1283666
Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCG 7106
| || || || ||||| ||||| || | || || || || || |||||||| |||
Sbjct 1283665 AGGCTACTGCTTCATCCGGGTTGATACTCTTGTTGAGATCACGGCCATTAAAATACTCCT 1283606
Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCA 7166
| | | || | |||||||| || || || || || || ||||| || || | |
Sbjct 1283605 GAAGTAGTCTCTGTACCTTCGGGATGCGGGTGGAGCCCCCTACTAAAACAATATCGTGGA 1283546
Query 7167 CTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATT 7223
||| || ||||| ||||| | || ||||| | |||||| ||||| |||| |||
Sbjct 1283545 TTTTAGACTTATCCATCTTGGCATCCCGAAGAGATTTTTCCACAGGCTCCAGGGTACCCC 1283486
Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283
|| ||||| || ||||| || |||||||| || | || |||||||| ||||| |
Sbjct 1283485 TA---AACAAATCTGCACACAACTCTTCAAAACGAGCCCTAGTGATGGATGTGTAGAAGT 1283429
Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTG---TTTGTGCCGTCGAAGATAACG 7340
||| ||| || || | || |||||||| | ||||| | |||| | || || | |
Sbjct 1283428 CAATGCCTTCATAAAGTGAGTCAATTTCCA-GGTTGGCCTGGGTGCTG--GATGACAGAG 1283372
Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400
| | ||| || | |||||| || || || | || | | || ||| ||| | |
Sbjct 1283371 TCCTCTTGGCCCTCTCACAGGCAGTGCGCAGCCGCCTCACAGCCCGCTTGTTCTGGCTGA 1283312
Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGA 7460
| || |||||||| || | ||||| || || ||||| | | ||||| ||| |
Sbjct 1283311 TGTCCTTCTTATGCTTCCTCTTAAATTCCTCCACAAAGTGGCTCACAAGTCTGTTATCAA 1283252
Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520
| || || ||||||||||| || ||||| || || || || || ||||| || || | |
Sbjct 1283251 AGTCCTCCCCACCCAAGTGGGTGTCCCCAGCTGTAGCCTTTACCTCAAAAATCCCATCGT 1283192
Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT-TC 7579
| || | | | || |||||||| || || |||||||| ||||| ||||| || | ||
Sbjct 1283191 CTATAGTCAGGATGGATACATCAAAGGTGCCTCCACCCAGATCAAAGATGAGGACATGTC 1283132
Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639
| || | | | ||||| | ||| || || || || || || || ||||||||
Sbjct 1283131 G-CTCCCCCTGTCCACCTTTATCTAAACCATAGGCAATGGCAGCTGCAGTGGGTTCATTG 1283073
Query 7640 ATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698
|| || | || ||| || ||||| || || | ||||| || || || || |||||
Sbjct 1283072 ATGATTCTTAGCACA-TTGAGGCCTGCGATCACACCTGCATCCTTGGTGGCCTGGCGTTG 1283014
Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758
|| || || || ||||| || || || | || || | ||||| | | || | | |
Sbjct 1283013 AGAGTCATTGAAATAGGCTGGCACGGTGATCACGGCATTGGTGACAGTGTGGCCCAAAAA 1282954
Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA 7818
| || || | |||||||| ||||| || ||||| || || ||||| |||| ||
Sbjct 1282953 AGCCTCTGCAGTCTCTTTCATCTTGGTCAGTACCATTGAAGAGATCTCCTCAGGGTAGAA 1282894
Query 7819 CTGTTTCGTTTCACCGTTA-AAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877
|||| | || || ||| || || | ||| | |||| || | | | | ||
Sbjct 1282893 AGCTTTCTTCTCCCCTTTATAAGACACCATCACT-TTGGGCTT---CCCTCCTTCATTGA 1282838
Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937
| || | | | | |||| ||||||||| || || | || ||| ||||| |
Sbjct 1282837 TCACTTGAAATGGCCAAAGTTTCATATCTGACTGTACAACAGGATCGTTAAATTTTCTGC 1282778
Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997
| || ||||| || |||||||| || || || | |||||||||||| |||||||| |
Sbjct 1282777 CAATCAGACGTTTGGCATCAAAGACAGTATTCTGCGGGTTCATGGCTACCTGGTTCTTAG 1282718
Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057
|||| || || || || || || | || || || || ||||| ||||| || |
Sbjct 1282717 CCGCATCTCCAATGAGCCGCTC---GGTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTGC 1282661
Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117
| || || |||||||| || || || || || | | | || | || || || || |
Sbjct 1282660 GGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCATGCTGGAACACCCCCACACAGG 1282601
Query 8118 AATACGTTGTTCCTAAATCAATACCGATTGCT 8149
|||| || || || | || || ||||| |||
Sbjct 1282600 AATAGGTGGTACCCAGGTCGATGCCGATGGCT 1282569
Score = 190 bits (210), Expect = 3e-43
Identities = 793/1249 (63%), Gaps = 32/1249 (3%)
Strand=Plus/Plus
Query 6922 CGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAG 6981
||| ||||| | || ||| || || || || || ||||| || | |||||||| ||
Sbjct 1256367 CGGCGTCATCACGCCGCCCGCCGTCTCCAGCCCCAGCGACAGCGGCGCCACGTCCAGCAG 1256426
Query 6982 TAACAGGTCTTGAACAGATTCGTTCC--CTT--CACCCGTTAAGATGGCGGCTTGGACCG 7037
| |||||| || || ||| ||| ||| | ||| | | |||||| || || || |
Sbjct 1256427 CAGCAGGTCCTGCACC--TTC--TCCGACTTGTCGCCCATCAGGATGGCCGCCTGCACGG 1256482
Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097
||||||||| || |||||||| |||||||| || | || || || || |||| |
Sbjct 1256483 CCGCCCCGTAGGCCACCGCCTCGTCGGGGTTGATGCTCTTGTTGAGGTCGCGCCCGTGGA 1256542
Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157
| | ||| | || | || | || ||||| || || || || || |||| || |
Sbjct 1256543 AGAAGTCCTGCAGCAGCTTCTGCACCTTGGGGATACGCGTGGAGCCGCCCACCAGCACCA 1256602
Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217
|| | | | || || || | ||| | ||| || || | || || || || ||||
Sbjct 1256603 CGTCGTGGATCTGCGCCTTGTCCAGCTTGGCGTCGCGCAGCGCCTTCTCCACGGGCTCCA 1256662
Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277
||||||| ||| ||||| ||||| || || || || || | || || |
Sbjct 1256663 GCGTGCCGCGGAACAGGTCGGCGCACAGCTCCTCGAAGCGCGCCCGCGTCACCGACGTGT 1256722
Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337
|||| || | ||| ||| | | ||| || || || | | | | || | | || || |
Sbjct 1256723 AGAAGTCGATGCCCTCGAACAGCGAGTCGATCTCCAGGCTGGCCTGCGTGCTGGACGACA 1256782
Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397
|| | ||| || | ||| || ||||| || | || || ||||| ||| ||| |
Sbjct 1256783 GGGTCCTCTTGGCCCTCTCGCAGGCCGTGCGCAGCCGCCGCAGGGCGCGCTTGTTCTGGC 1256842
Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457
| || ||||| || || | || ||||| || | ||| | | || | |
Sbjct 1256843 TCAAGTCCTTCTTGTGCTTCCTCTTGAACTCCTCCACCAGGTGGCTCACCAGCCGGTTGT 1256902
Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517
|||| || || || |||| ||| || || ||||| || || || || || ||||| ||
Sbjct 1256903 CGAAGTCCTCGCCGCCCAGGTGCGTGTCGCCCGCCGTGGCCTTCACCTCGAAGATGCCAT 1256962
Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577
| || ||| | | | ||| || || ||||| || || |||||||| || ||||| ||||
Sbjct 1256963 CGTCGATGGTCAGGACCGACACGTCGAACGTGCCGCCGCCCAGGTCGAAGATGAGCACGT 1257022
Query 7578 TCGTATCGTCGTCTTT------------------GTTCTTATCGAGACCGTACGCGATAG 7619
| ||| || | | | || || || || ||||| |
Sbjct 1257023 TGCGCTCGCCGCCGCGCCCGCCGCCGCGCCCGCCGGTGCGGTCCAGCCCATAGGCGATGG 1257082
Query 7620 CCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCAT 7679
| |||||||| || || || || || || || ||| || || || || |||| |
Sbjct 1257083 CGGCCGCCGTGGGCTCGTTGATGATCCGCAGCACGTTGAGCCCCGCGATCACGCCCGCGT 1257142
Query 7680 CTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCG 7739
| || || || || || ||||| |||||||||||||| || ||||| | |||||||
Sbjct 1257143 CCTTGGTGGCCTGCCGCTGCGAGTCGTTAAAGTAGGCGGGCACCGTGATCACCGCGTTGC 1257202
Query 7740 TGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATG 7799
| || | || || || | || || | || ||||| ||||| || ||||| || |
Sbjct 1257203 TCACCGGGTGCCCCAGGTAGGCCTCGGCCGTCTCCTTCATCTTGGTCAGCACCATGGACG 1257262
Query 7800 AAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTT 7859
| ||||| || | ||| || || || || || | || | | |||| |
Sbjct 1257263 AGATCTCCTCCGGGAAGAACGTCTTGGTCTCGCCCTTGTAGCTCACACGCACCTTGGGCT 1257322
Query 7860 TATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTT 7919
| | ||| | || ||| |||| | | ||| | ||||| ||| | || |||
Sbjct 1257323 TGT-CGC--CCTCGCCGATCACCTGGAAGGGCCAGTGCTTCATGTCGGCCTGCACCACCG 1257379
Query 7920 GGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCA 7979
||| | ||||| | ||||| || ||||| || || || || ||||| | |||||||
Sbjct 1257380 CGTCGGCGAACTTGCGGCCGATCAGCCGCTTGGCGTCGAACACCGTGTTCTGCGGGTTCA 1257439
Query 7980 TGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGA 8039
|| |||||||| || ||||| ||||| || || || | || || || || |
Sbjct 1257440 GCGCCACCTGGTTCTTGGCGGCGTCTCCGATCAGCCGCTC---GGTGTCGGTGAAGGCCA 1257496
Query 8040 CGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTT 8099
|||| ||||| || || || || |||||||| || || || || || | ||| |
Sbjct 1257497 CGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCT 1257556
Query 8100 GCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148
| | || || |||||||| || || || || | || || ||||| ||
Sbjct 1257557 GGAACACCCCCACGCACGAGTAGGTGGTGCCCAGGTCGATGCCGATCGC 1257605
Score = 190 bits (210), Expect = 3e-43
Identities = 793/1249 (63%), Gaps = 32/1249 (3%)
Strand=Plus/Plus
Query 6922 CGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAG 6981
||| ||||| | || ||| || || || || || ||||| || | |||||||| ||
Sbjct 1274273 CGGCGTCATCACGCCGCCCGCCGTCTCCAGCCCCAGCGACAGCGGCGCCACGTCCAGCAG 1274332
Query 6982 TAACAGGTCTTGAACAGATTCGTTCC--CTT--CACCCGTTAAGATGGCGGCTTGGACCG 7037
| |||||| || || ||| ||| ||| | ||| | | |||||| || || || |
Sbjct 1274333 CAGCAGGTCCTGCACC--TTC--TCCGACTTGTCGCCCATCAGGATGGCCGCCTGCACGG 1274388
Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097
||||||||| || |||||||| |||||||| || | || || || || |||| |
Sbjct 1274389 CCGCCCCGTAGGCCACCGCCTCGTCGGGGTTGATGCTCTTGTTGAGGTCGCGCCCGTGGA 1274448
Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157
| | ||| | || | || | || ||||| || || || || || |||| || |
Sbjct 1274449 AGAAGTCCTGCAGCAGCTTCTGCACCTTGGGGATACGCGTGGAGCCGCCCACCAGCACCA 1274508
Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217
|| | | | || || || | ||| | ||| || || | || || || || ||||
Sbjct 1274509 CGTCGTGGATCTGCGCCTTGTCCAGCTTGGCGTCGCGCAGCGCCTTCTCCACGGGCTCCA 1274568
Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277
||||||| ||| ||||| ||||| || || || || || | || || |
Sbjct 1274569 GCGTGCCGCGGAACAGGTCGGCGCACAGCTCCTCGAAGCGCGCCCGCGTCACCGACGTGT 1274628
Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337
|||| || | ||| ||| | | ||| || || || | | | | || | | || || |
Sbjct 1274629 AGAAGTCGATGCCCTCGAACAGCGAGTCGATCTCCAGGCTGGCCTGCGTGCTGGACGACA 1274688
Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397
|| | ||| || | ||| || ||||| || | || || ||||| ||| ||| |
Sbjct 1274689 GGGTCCTCTTGGCCCTCTCGCAGGCCGTGCGCAGCCGCCGCAGGGCGCGCTTGTTCTGGC 1274748
Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457
| || ||||| || || | || ||||| || | ||| | | || | |
Sbjct 1274749 TCAAGTCCTTCTTGTGCTTCCTCTTGAACTCCTCCACCAGGTGGCTCACCAGCCGGTTGT 1274808
Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517
|||| || || || |||| ||| || || ||||| || || || || || ||||| ||
Sbjct 1274809 CGAAGTCCTCGCCGCCCAGGTGCGTGTCGCCCGCCGTGGCCTTCACCTCGAAGATGCCAT 1274868
Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577
| || ||| | | | ||| || || ||||| || || |||||||| || ||||| ||||
Sbjct 1274869 CGTCGATGGTCAGGACCGACACGTCGAACGTGCCGCCGCCCAGGTCGAAGATGAGCACGT 1274928
Query 7578 TCGTATCGTCGTCTTT------------------GTTCTTATCGAGACCGTACGCGATAG 7619
| ||| || | | | || || || || ||||| |
Sbjct 1274929 TGCGCTCGCCGCCGCGCCCGCCGCCGCGCCCGCCGGTGCGGTCCAGCCCATAGGCGATGG 1274988
Query 7620 CCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCAT 7679
| |||||||| || || || || || || || ||| || || || || |||| |
Sbjct 1274989 CGGCCGCCGTGGGCTCGTTGATGATCCGCAGCACGTTGAGCCCCGCGATCACGCCCGCGT 1275048
Query 7680 CTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCG 7739
| || || || || || ||||| |||||||||||||| || ||||| | |||||||
Sbjct 1275049 CCTTGGTGGCCTGCCGCTGCGAGTCGTTAAAGTAGGCGGGCACCGTGATCACCGCGTTGC 1275108
Query 7740 TGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATG 7799
| || | || || || | || || | || ||||| ||||| || ||||| || |
Sbjct 1275109 TCACCGGGTGCCCCAGGTAGGCCTCGGCCGTCTCCTTCATCTTGGTCAGCACCATGGACG 1275168
Query 7800 AAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTT 7859
| ||||| || | ||| || || || || || | || | | |||| |
Sbjct 1275169 AGATCTCCTCCGGGAAGAACGTCTTGGTCTCGCCCTTGTAGCTCACGCGCACCTTGGGCT 1275228
Query 7860 TATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTT 7919
| | ||| | || ||| |||| | | ||| | ||||| ||| | || |||
Sbjct 1275229 TGT-CGC--CCTCGCCGATCACCTGGAAGGGCCAGTGCTTCATGTCGGCCTGCACCACCG 1275285
Query 7920 GGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCA 7979
||| | ||||| | ||||| || ||||| || || || || ||||| | |||||||
Sbjct 1275286 CGTCGGCGAACTTGCGGCCGATCAGCCGCTTGGCGTCGAACACCGTGTTCTGCGGGTTCA 1275345
Query 7980 TGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGA 8039
|| |||||||| || ||||| ||||| || || || | || || || || |
Sbjct 1275346 GCGCCACCTGGTTCTTGGCGGCGTCTCCGATCAGCCGCTC---GGTGTCGGTGAAGGCCA 1275402
Query 8040 CGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTT 8099
|||| ||||| || || || || |||||||| || || || || || | ||| |
Sbjct 1275403 CGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCT 1275462
Query 8100 GCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148
| | || || |||||||| || || || || | || || ||||| ||
Sbjct 1275463 GGAACACCCCCACGCACGAGTAGGTGGTGCCCAGGTCGATGCCGATCGC 1275511
>seq10
Length=26250347
Score = 165 bits (182), Expect = 1e-35
Identities = 360/539 (67%), Gaps = 0/539 (0%)
Strand=Plus/Plus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| || || || || ||||||||||| ||||| | |||||||| || || ||||| ||
Sbjct 23029965 GCACCATAGGCAACAGCCTCATCGGGATTAATGCTCTTATTCAGCTCCTTCCCGTTGAAG 23030024
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
|||| | | | || || || || || || || || ||||| ||||| || ||
Sbjct 23030025 AAATCTTGCAGAAGCTTCTGGATCTTGGGAATACGGGTGGAACCACCCACCAAGACAATG 23030084
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|||| | | || || || | || | || || || | |||||| ||||| |||| |
Sbjct 23030085 TCATGGATCTGTGACTTGTCTAGTTTGGCATCACGGAGAGCTTTTTCTACAGGATCCAGA 23030144
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
|||||| | ||| | || || ||||| || || ||||| || || ||||||
Sbjct 23030145 GTGCCACGGAAGAGGTCAGCATTCAACTCTTCAAATCGAGCCCGGGTGATAGAAGTATAG 23030204
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
|| |||| ||| ||||| | || ||||| || || | | |||| | || || |
Sbjct 23030205 AAGTCAATGCCTTCGTACAGGGAGTCAATCTCGATACTGGCCTGTGTGCTGGAGGAGAGG 23030264
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| ||||| || |||||||| || || || | ||| || | || | ||| |
Sbjct 23030265 GTACGCTTGGCCCGCTCACAAGCAGTGCGGAGACGGCGGACAGCTCTTTTGTTCTCACTG 23030324
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459
|| || |||||||| || ||||| || || || ||| || | | || ||
Sbjct 23030325 ATGTCCTTCTTATGCTTTCGTTTGAATTCAGCAATGAAATGGTTTACCATTCGGTTGTCA 23030384
Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519
|| ||||| ||||||||||| || || || || || | |||||| |||||||| || |
Sbjct 23030385 AAGTCTTCTCCACCCAAGTGGGTGTCTCCTGCTGTAGATTTGACCTCAAAGATGCCATCC 23030444
Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578
||||| | | | |||||||| || || ||||| || | |||||||| || || ||
Sbjct 23030445 TCAATAGTGAGGATAGAAACATCGAAAGTGCCACCTCCTAAATCAAAAATCAGCACATT 23030503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634615222342120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |