Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_016437.1
Length=26340
Score E
Sequences producing significant alignments: (Bits) Value
seq4931 120 5e-23
>seq4931
Length=27746
Score = 120 bits (132), Expect = 5e-23
Identities = 203/294 (69%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 15095 GATGTTATGGATAATGTTAATCCTTTTAATCATCATAAGAATAGAGGTTTGCAGTATAGA 15154
||||| ||||| | |||||||| ||||||||||| | |||| |||||| ||| ||
Sbjct 16742 GATGTGATGGACACGGTTAATCCATTTAATCATCACAGAAATACTGGTTTGAGGTACAGG 16801
Query 15155 AGTCAGATTTTGGGTAATGGTAGAGTTTGTGATTTTCATATTCAGATACCTCAGAAATTT 15214
|||| | || || |||||| | | | |||||||||||| | || || || |||
Sbjct 16802 TCTCAGCTATTAGGAAATGGTCGCTATGCTTCCTTTCATATTCAGGTTCCGCAAAAGTTT 16861
Query 15215 TTTGCTATTAGGAATTTACTTTTGTTGCCAGGCACTTATAGTTATGAGTGGTGGTTTAGG 15274
||||| ||| | ||| ||| || | || || | || ||||| || |||| |||||
Sbjct 16862 TTTGCACTTAAAAGTTTGCTTCTGCTACCGGGATCGTACAGTTACGAATGGTCTTTTAGA 16921
Query 15275 AAAGATCCAAATTTGGTTTTGCAATCAAGTTTGGGTAATGATTTGAGAGCTGATGGAGCT 15334
|||||| ||| || ||||||| | | | || |||||| |||| | || |||||
Sbjct 16922 AAAGATGTAAACATGATTTTGCAGAGTACTCTTGGCAATGATCTGAGGGAGGACGGAGCG 16981
Query 15335 TCTATTACTTATTCTAGTATTAACCTTTATGCAAGCTTTTTTCCTATGGATCAT 15388
|| | || | | || |||| ||| | ||| | || ||||| ||| ||||
Sbjct 16982 TCAGTAACATTTGACAGCATTAGCCTATTTGCTACTTTCTTTCCGATGTCTCAT 17035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 84106153455277
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |