Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12]
65,193 sequences; 2,236,368,823 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq66 87.8 1e-12
>seq66
Length=5789316
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| || ||||| | || | || || || || || || || || ||||| || |
Sbjct 2649894 CCTCCCCTCAAACGGAGCACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 2649835
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| |||| ||||| || ||||| |||| | ||| || || || |||
Sbjct 2649834 AGGGTACGGCCATCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 2649775
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || || || || || ||| | || | |||||| | |||||
Sbjct 2649774 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 2649715
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || |||| || ||||| || | || || || || |||||||||
Sbjct 2649714 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 2649667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395963541083901
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |