Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq20 84.2 4e-11 >seq20 Length=25211774 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 ||||||||||| || |||||||| ||||| || ||||| || ||| | || |||||| Sbjct 21308604 GTAGCCTTTGCCGCGGTGGAGGGAATCTTCTTTTCTGGTTCTTTCGCGTCGATATTCTGG 21308545 Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 || ||| || | |||| ||||| || || |||||||| ||||| || ||||| || Sbjct 21308544 CTGAAGAAG-CGAGGACTTATGCCTGGCCTCACGTTTTCCAATGAGCTTATTAGCAGAGA 21308486 Query 26004 CGAGG 26008 ||||| Sbjct 21308485 CGAGG 21308481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928087872761920