Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dipodomys_20ordii_20[refseq_20GCF_5F000151885.1_202014-12-12] 65,193 sequences; 2,236,368,823 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq22 91.5 2e-13 >seq22 Length=17426531 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | || ||| | | || || || ||||| || || ||||||||| | ||||| | Sbjct 1406525 TTTGGTATGCCATTATTGAGTCTCAAACAGAGACGGGCACCCCATATATGGTCTACAAAG 1406466 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 || | ||||| |||||| ||||| ||||| ||||||||||||| || || || | Sbjct 1406465 ATTCCTGTAATCGGAAGAGCAACCAGCAGAATCTGGGAACAATCAAATGCAGCAACCTGT 1406406 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 | || ||||| ||||||| || || |||||| Sbjct 1406405 GTACAGAAATAGTAGAGTATACTAGCAAAGATGAG 1406371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596083447975840